Extending the applicability of Thermal Dynamics to Evolutionary Biology
暂无分享,去创建一个
[1] Luca Peliti,et al. Introduction to the statistical theory of Darwinian evolution , 1997, cond-mat/9712027.
[2] Michael M. Desai,et al. Beneficial Mutation–Selection Balance and the Effect of Linkage on Positive Selection , 2006, Genetics.
[3] J. Coffin,et al. The solitary wave of asexual evolution , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[4] A. J. Kovacs,et al. Transition vitreuse dans les polymères amorphes. Etude phénoménologique , 1964 .
[5] N. Shoresh,et al. Optimization of lag time underlies antibiotic tolerance in evolved bacterial populations , 2014, Nature.
[6] B. Derrida. Random-Energy Model: Limit of a Family of Disordered Models , 1980 .
[7] K. Jain,et al. Evolutionary dynamics on strongly correlated fitness landscapes. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.
[8] M. Lynch. The Lower Bound to the Evolution of Mutation Rates , 2011, Genome biology and evolution.
[9] T. R. Kirkpatrick,et al. Scaling concepts for the dynamics of viscous liquids near an ideal glassy state. , 1989, Physical review. A, General physics.
[10] S. Leibler,et al. Phenotypic Diversity, Population Growth, and Information in Fluctuating Environments , 2005, Science.
[11] Chin-Kun Hu,et al. Solvable biological evolution model with a parallel mutation-selection scheme. , 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.
[12] Chiara Cammarota,et al. Spontaneous energy-barrier formation in entropy-driven glassy dynamics. , 2014, Physical review. E, Statistical, nonlinear, and soft matter physics.
[13] P. Sibani,et al. Evolution dynamics in terraced NK landscapes , 1999, adap-org/9904004.
[14] Memory and Chaos Effects in Spin Glasses , 1998, cond-mat/9806134.
[15] M. Lässig,et al. Stochastic evolution of transcription factor binding sites , 2022 .
[16] C. Wilke,et al. The traveling-wave approach to asexual evolution: Muller's ratchet and speed of adaptation. , 2007, Theoretical population biology.
[17] Maurizio Serva,et al. Diffusion reproduction processes , 1990 .
[18] M. Kimura,et al. An introduction to population genetics theory , 1971 .
[19] L. Struik. On the rejuvenation of physically aged polymers by mechanical deformation , 1997 .
[20] Meyer,et al. Clustering of independently diffusing individuals by birth and death processes. , 1996, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[21] T. Hwa,et al. On the rapidity of antibiotic resistance evolution facilitated by a concentration gradient , 2012, Proceedings of the National Academy of Sciences.
[22] P. Sibani,et al. The long time behavior of the rate of recombination , 1981 .
[23] V. Pande,et al. On the application of statistical physics to evolutionary biology. , 2009, Journal of theoretical biology.
[24] M. Lässig,et al. Molecular evolution under fitness fluctuations. , 2008, Physical review letters.
[25] S. Kauffman. Metabolic stability and epigenesis in randomly constructed genetic nets. , 1969, Journal of theoretical biology.
[26] Eigen model as a quantum spin chain: exact dynamics. , 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.
[27] Michael W Deem,et al. Parallel tempering: theory, applications, and new perspectives. , 2005, Physical chemistry chemical physics : PCCP.
[28] M. Mézard,et al. Emergence of clones in sexual populations , 2012, 1205.2059.
[29] Johannes Berg,et al. Adaptive evolution of transcription factor binding sites , 2003, BMC Evolutionary Biology.
[30] Debra J. Searles,et al. The Fluctuation Theorem , 2002 .
[31] D. Nelson,et al. Genetic drift at expanding frontiers promotes gene segregation , 2007, Proceedings of the National Academy of Sciences.
[32] S. Sastry,et al. Encoding of memory in sheared amorphous solids. , 2014, Physical review letters.
[33] M. Lässig,et al. Fitness flux and ubiquity of adaptive evolution , 2010, Proceedings of the National Academy of Sciences.
[34] J. Fontanari,et al. Evolutionary dynamics on rugged fitness landscapes: exact dynamics and information theoretical aspects. , 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.
[35] Andrea Montanari,et al. Gibbs states and the set of solutions of random constraint satisfaction problems , 2006, Proceedings of the National Academy of Sciences.
[36] Evolution on a Smooth Landscape: The Role of Bias , 1998 .
[37] L. Laloux,et al. Phase space geometry and slow dynamics , 1995, cond-mat/9510079.
[38] Benjamin H. Good,et al. Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations , 2012, Proceedings of the National Academy of Sciences.
[39] R. Lenski,et al. Microbial genetics: Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation , 2003, Nature Reviews Genetics.
[40] A. W. F. Edwards,et al. The statistical processes of evolutionary theory , 1963 .
[41] R. Axelrod,et al. Evolutionary Dynamics , 2004 .
[42] Kessler,et al. RNA virus evolution via a fitness-space model. , 1996, Physical review letters.
[43] Lev Tsimring,et al. Evolution on a smooth landscape , 1996, cond-mat/9607174.