SAM: String-based sequence search algorithm for mitochondrial DNA database queries

[1]  Matthias Gallé,et al.  Review of: Algorithms on Strings by Maxime Crochemore, Christophe Hancart and Thierry Lecroq , 2015, SIGA.

[2]  T. Parsons,et al.  Mitochondrial control region sequences from an African American population sample. , 2009, Forensic science international. Genetics.

[3]  W. Parson,et al.  Forensic and phylogeographic characterization of mtDNA lineages from northern Thailand (Chiang Mai) , 2009, International Journal of Legal Medicine.

[4]  Manfred Kayser,et al.  Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation , 2009, Human mutation.

[5]  Walther Parson,et al.  EMPOP--a forensic mtDNA database. , 2007, Forensic science international. Genetics.

[6]  Anita Brandstätter,et al.  Generating population data for the EMPOP database - an overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example. , 2007, Forensic science international.

[7]  T. Parsons,et al.  Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database , 2004, International Journal of Legal Medicine.

[8]  Mark R. Wilson,et al.  Further Discussion of the Consistent Treatment of Length Variants in the Human Mitochondrial DNA Control Region , 2002 .

[9]  Bruce Budowle,et al.  Recommendations for consistent treatment of length variants in the human mitochondrial DNA control region. , 2002, Forensic science international.

[10]  B Brinkmann,et al.  Considerations by the European DNA profiling (EDNAP) group on the working practices, nomenclature and interpretation of mitochondrial DNA profiles. , 2001, Forensic science international.

[11]  D. Mount.  Bioinformatics: Sequence and Genome Analysis , 2001 .

[12]  A. Carracedo,et al.  DNA commission of the international society for forensic genetics: guidelines for mitochondrial DNA typing. , 2000, Forensic science international.

[13]  D. Turnbull,et al.  Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA , 1999, Nature Genetics.

[14]  F. Sanger,et al.  Sequence and organization of the human mitochondrial genome , 1981, Nature.

[15]  W. Parson,et al.  Consistent treatment of length variants in the human mtDNA control region: a reappraisal , 2006, International Journal of Legal Medicine.

[16]  Q. Kong,et al.  Estimation of Mutation Rates and Coalescence Times: Some Caveats , 2006 .

[17]  H. Bandelt,et al.  Human Mitochondrial DNA and the Evolution of Homo sapiens , 2006 .

[18]  S. Pollak,et al.  Mitochondrial heteroplasmy among maternally related individuals , 2000, International Journal of Legal Medicine.

[19]  Dan Gusfield,et al.  Algorithms on Strings, Trees, and Sequences - Computer Science and Computational Biology , 1997 .