Genetically encoded biosensors based on innovative scaffolds.
暂无分享,去创建一个
[1] Daria M. Shcherbakova,et al. Smallest near-infrared fluorescent protein evolved from cyanobacteriochrome as versatile tag for spectral multiplexing , 2019, Nature Communications.
[2] Stephanie C. Seeman,et al. Bright and photostable chemigenetic indicators for extended in vivo voltage imaging , 2018, Science.
[3] Jonathan R. Tomshine,et al. Conformational biosensors reveal GPCR signalling from endosomes , 2013, Nature.
[4] K. Tye,et al. A light- and calcium-gated transcription factor for imaging and manipulating activated neurons , 2017, Nature Biotechnology.
[5] A. Miyawaki,et al. Imaging intracellular free Ca2+ concentration using yellow cameleons. , 2013, Cold Spring Harbor protocols.
[6] Christopher P. Toseland,et al. Fluorescent labeling and modification of proteins , 2013, Journal of chemical biology.
[7] Gerald R. V. Hammond,et al. Genetically encoded lipid biosensors , 2018, Molecular biology of the cell.
[8] I. Johnson,et al. The molecular probes handbook : a guide to fluorescent probes and labeling technologies , 2010 .
[9] T. Kerppola,et al. Bimolecular fluorescence complementation (BiFC) analysis as a probe of protein interactions in living cells. , 2008, Annual review of biophysics.
[10] Brian P. Mehl,et al. Bright photoactivatable fluorophores for single-molecule imaging , 2016, Nature Methods.
[11] K. Tan,et al. Semisynthetic fluorescent sensor proteins based on self-labeling protein tags. , 2009, Journal of the American Chemical Society.
[12] N. Lambert,et al. Mini G protein probes for active G protein–coupled receptors (GPCRs) in live cells , 2018, The Journal of Biological Chemistry.
[13] R. Tsien,et al. Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin , 1997, Nature.
[14] R. Tsien,et al. pHTomato: A genetically-encoded indicator that enables multiplex interrogation of synaptic activity , 2012, Nature Neuroscience.
[15] Robert E Campbell,et al. A fluorogenic red fluorescent protein heterodimer. , 2012, Chemistry & biology.
[16] Alison G. Tebo,et al. A split fluorescent reporter with rapid and reversible complementation , 2019, Nature Communications.
[17] A. Boersma,et al. Influence of Fluorescent Protein Maturation on FRET Measurements in Living Cells , 2018, ACS sensors.
[18] Markus Seiler,et al. The transience of transient overexpression , 2013, Nature Methods.
[19] M. Guazzaroni,et al. Converting a Periplasmic Binding Protein into a Synthetic Biosensing Switch through Domain Insertion , 2019, BioMed research international.
[20] Dongmin Lee,et al. A calcium- and light-gated switch to induce gene expression in activated neurons , 2017, Nature Biotechnology.
[21] H. Sondermann,et al. Structural basis for calcium sensing by GCaMP2. , 2008, Structure.
[22] C. Sahlgren,et al. Genetically-encoded tools for cAMP probing and modulation in living systems , 2015, Front. Pharmacol..
[23] D. J. Harrison,et al. Bright and fast multi-colored voltage reporters via electrochromic FRET , 2014, Nature Communications.
[24] Wesley R. Legant,et al. Carbofluoresceins and Carborhodamines as Scaffolds for High-Contrast Fluorogenic Probes , 2013, ACS chemical biology.
[25] Benjamien Moeyaert,et al. Diffraction‐Unlimited Fluorescence Microscopy of Living Biological Samples Using pcSOFI , 2015, Current protocols in chemical biology.
[26] Catherine Chapuis,et al. Multiplexing PKA and ERK1&2 kinases FRET biosensors in living cells using single excitation wavelength dual colour FLIM , 2017, Scientific Reports.
[27] H. Hellinga,et al. Periplasmic binding proteins: a versatile superfamily for protein engineering. , 2004, Current opinion in structural biology.
[28] Jin Zhang,et al. Genetically encoded fluorescent biosensors illuminate kinase signaling in cancer , 2019, The Journal of Biological Chemistry.
[29] Vladimir I Martynov,et al. Genetically encoded fluorescent indicators for live cell pH imaging. , 2018, Biochimica et biophysica acta. General subjects.
[30] A. Schots,et al. Fluobodies: green fluorescent single-chain Fv fusion proteins. , 1999, Journal of immunological methods.
[31] V. Verkhusha,et al. Guide to red fluorescent proteins and biosensors for flow cytometry. , 2011, Methods in cell biology.
[32] B. Koch,et al. A general strategy to develop cell permeable and fluorogenic probes for multicolour nanoscopy , 2019, Nature Chemistry.
[33] Shengnan Xu,et al. Fluorogen-activating proteins: beyond classical fluorescent proteins , 2018, Acta pharmaceutica Sinica. B.
[34] Jinhua Dong,et al. Flashbody: A Next Generation Fluobody with Fluorescence Intensity Enhanced by Antigen Binding. , 2017, Analytical chemistry.
[35] Rafael Yuste,et al. Comparative Evaluation of Genetically Encoded Voltage Indicators , 2019, Cell reports.
[36] Hakan Inan,et al. Fast, in vivo voltage imaging using a red fluorescent indicator , 2018, Nature Methods.
[37] Marina V Shirmanova,et al. Genetically encoded far-red fluorescent sensors for caspase-3 activity. , 2016, BioTechniques.
[38] B. Reid,et al. Chromophore formation in green fluorescent protein. , 1997, Biochemistry.
[39] Michael W. Davidson,et al. A bright monomeric green fluorescent protein derived from Branchiostoma lanceolatum , 2013, Nature Methods.
[40] Gero Miesenböck,et al. Visualizing secretion and synaptic transmission with pH-sensitive green fluorescent proteins , 1998, Nature.
[41] F. Mérola,et al. pH sensitivity of FRET reporters based on cyan and yellow fluorescent proteins , 2015, Analytical and Bioanalytical Chemistry.
[42] Alison G. Tebo,et al. Orthogonal fluorescent chemogenetic reporters for multicolor imaging , 2020, bioRxiv.
[43] Kiryl D Piatkevich,et al. Genetically encoded calcium indicator with NTnC-like design and enhanced fluorescence contrast and kinetics , 2018, BMC Biotechnology.
[44] Bernardo L. Sabatini,et al. Recombinant Probes for Visualizing Endogenous Synaptic Proteins in Living Neurons , 2013, Neuron.
[45] M. Drobizhev,et al. Understanding the Fluorescence Change in Red Genetically Encoded Calcium Ion Indicators , 2019, Biophysical journal.
[46] K. Svoboda,et al. A genetically encoded fluorescent sensor of ERK activity , 2008, Proceedings of the National Academy of Sciences.
[47] E. Schreiter,et al. rsCaMPARI: an erasable marker of neuronal activity , 2019, bioRxiv.
[48] Shy Shoham,et al. A genetically encoded near-infrared fluorescent calcium ion indicator , 2018, Nature Methods.
[49] D. Maclaurin,et al. Optical recording of action potentials in mammalian neurons using a microbial rhodopsin , 2011, Nature Methods.
[50] Robert E Campbell,et al. Dimerization-dependent green and yellow fluorescent proteins. , 2012, ACS synthetic biology.
[51] Claire E McKellar,et al. Rational design of a high-affinity, fast, red calcium indicator R-CaMP2 , 2014, Nature Methods.
[52] M. Ahrens,et al. A bright and high-performance genetically encoded Ca2+ indicator based on mNeonGreen fluorescent protein , 2020, bioRxiv.
[53] J. J. Macklin,et al. A general method to improve fluorophores for live-cell and single-molecule microscopy , 2014, Nature Methods.
[54] Mikhail Drobizhev,et al. Deciphering the molecular mechanism responsible for GCaMP6m's Ca2+-dependent change in fluorescence , 2017, PloS one.
[55] Suliana Manley,et al. A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. , 2013, Nature chemistry.
[56] Kai Johnsson,et al. A fluorescent sensor for GABA and synthetic GABA(B) receptor ligands. , 2012, Journal of the American Chemical Society.
[57] A. Nimmerjahn,et al. Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors , 2018, Science.
[58] Yongxin Zhao,et al. An Expanded Palette of Genetically Encoded Ca2+ Indicators , 2011, Science.
[59] Sohum Mehta,et al. Single-fluorophore Biosensors for Sensitive and Multiplexed Detection of Signaling Activities , 2018, Nature Cell Biology.
[60] Robert E Campbell,et al. Designs and applications of fluorescent protein-based biosensors. , 2010, Current opinion in chemical biology.
[61] R. Roberts,et al. RasIns: Genetically Encoded Intrabodies of Activated Ras Proteins. , 2017, Journal of molecular biology.
[62] F. Quiocho,et al. Periplasmic binding protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine-binding protein and its complex with leucine. , 1989, Journal of molecular biology.
[63] K. Sumiyama,et al. Booster, a Red-Shifted Genetically Encoded Förster Resonance Energy Transfer (FRET) Biosensor Compatible with Cyan Fluorescent Protein/Yellow Fluorescent Protein-Based FRET Biosensors and Blue Light-Responsive Optogenetic Tools. , 2020, ACS sensors.
[64] Marjeta Urh,et al. HaloTag: a novel protein labeling technology for cell imaging and protein analysis. , 2008, ACS chemical biology.
[65] Jacob Beal,et al. Engineering modular intracellular protein sensor-actuator devices , 2018, Nature Communications.
[66] S. Ziegler,et al. Fusion of green fluorescent protein to the C-terminus of granulysin alters its intracellular localization in comparison to the native molecule , 2004, Journal of Negative Results in Biomedicine.
[67] Robert E Campbell,et al. Ratiometric biosensors based on dimerization-dependent fluorescent protein exchange , 2015, Nature Methods.
[68] Li I. Zhang,et al. ED SUM: Signaling by the neurotransmitter acetylcholine is monitored in cells and animals with a sensitive reporter. , 2018, Nature Biotechnology.
[69] Wolfgang Sadee,et al. The venus flytrap of periplasmic binding proteins: An ancient protein module present in multiple drug receptors , 1999, AAPS PharmSci.
[70] Ren Sun,et al. mRNA display selection of a high-affinity, modification-specific phospho-IkappaBalpha-binding fibronectin. , 2008, ACS chemical biology.
[71] A. Miyawaki,et al. Expanded dynamic range of fluorescent indicators for Ca(2+) by circularly permuted yellow fluorescent proteins. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[72] E. Schreiter,et al. Improved methods for marking active neuron populations , 2018, Nature Communications.
[73] James A J Fitzpatrick,et al. Fluorogen-activating single-chain antibodies for imaging cell surface proteins , 2008, Nature Biotechnology.
[74] Benjamin F. Grewe,et al. High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor , 2015, Science.
[75] Anatol C. Kreitzer,et al. A Genetically Encoded Fluorescent Sensor Enables Rapid and Specific Detection of Dopamine in Flies, Fish, and Mice , 2018, Cell.
[76] R. Tsien. Fluorescent probes of cell signaling. , 1989, Annual review of neuroscience.
[77] Amy E Palmer,et al. Design and application of genetically encoded biosensors. , 2011, Trends in biotechnology.
[78] W. Frommer,et al. GLUT1 and GLUT9 as major contributors to glucose influx in HepG2 cells identified by a high sensitivity intramolecular FRET glucose sensor. , 2008, Biochimica et biophysica acta.
[79] Alexander M. Jones,et al. Genetically Encoded Biosensors in Plants: Pathways to Discovery. , 2018, Annual review of plant biology.
[80] E. Boyden,et al. Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein , 2020, International journal of molecular sciences.
[81] Jasper Akerboom,et al. Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design , 2009, Journal of Biological Chemistry.
[82] Takeharu Nagai,et al. Genetically encoded Ca(2+) indicators: properties and evaluation. , 2013, Biochimica et biophysica acta.
[83] S. Martin,et al. Target recognition by calmodulin: Dissecting the kinetics and affinity of interaction using short peptide sequences , 1996, Protein science : a publication of the Protein Society.
[84] Jun Chu,et al. A Guide to Fluorescent Protein FRET Pairs , 2016, Sensors.
[85] S. Rasmussen,et al. Structure of a nanobody-stabilized active state of the β2 adrenoceptor , 2010, Nature.
[86] K. Šliogerytė,et al. Differential effects of LifeAct-GFP and actin-GFP on cell mechanics assessed using micropipette aspiration , 2016, Journal of biomechanics.
[87] Arnaud Gautier,et al. Next-Generation Fluorogen-Based Reporters and Biosensors for Advanced Bioimaging , 2019, International journal of molecular sciences.
[88] T. Kornberg,et al. Designing a Green Fluorogenic Protease Reporter by Flipping a Beta Strand of GFP for Imaging Apoptosis in Animals. , 2019, Journal of the American Chemical Society.
[89] Corella S. Casas-Delucchi,et al. Modulation of protein properties in living cells using nanobodies , 2010, Nature Structural &Molecular Biology.
[90] Karel Svoboda,et al. From cudgel to scalpel: toward precise neural control with optogenetics , 2011, Nature Methods.
[91] Mathew Tantama,et al. Optogenetic reporters: Fluorescent protein-based genetically encoded indicators of signaling and metabolism in the brain. , 2012, Progress in brain research.
[92] John R. Allen,et al. A naturally-monomeric infrared fluorescent protein for protein labeling in vivo , 2015, Nature Methods.
[93] A. Gordus,et al. Sensitive red protein calcium indicators for imaging neural activity , 2016, bioRxiv.
[94] S. Hell,et al. Fluorogenic Probes for Multicolor Imaging in Living Cells. , 2016, Journal of the American Chemical Society.
[95] Pierre-Alain Binz,et al. Semisynthetic sensor proteins enable metabolic assays at the point of care , 2018, Science.
[96] Michiyuki Matsuda,et al. Two decades of genetically encoded biosensors based on Förster resonance energy transfer. , 2019, Cell structure and function.
[97] Jin Zhang,et al. Single-color, ratiometric biosensors for detecting signaling activities in live cells , 2018, eLife.
[98] F. Beltram,et al. Green fluorescent protein based pH indicators for in vivo use: a review , 2009, Analytical and bioanalytical chemistry.
[99] Jacob J. Hughey,et al. High-Sensitivity Measurements of Multiple Kinase Activities in Live Single Cells , 2014, Cell.
[100] Thomas Le Saux,et al. Small fluorescence-activating and absorption-shifting tag for tunable protein imaging in vivo , 2015, Proceedings of the National Academy of Sciences.
[101] E. Schreiter,et al. Bright and tunable far-red chemigenetic indicators , 2020, bioRxiv.
[102] Robert E Campbell,et al. Genetically encoded biosensors based on engineered fluorescent proteins. , 2009, Chemical Society reviews.
[103] Eric C Greenwald,et al. Genetically Encoded Fluorescent Biosensors Illuminate the Spatiotemporal Regulation of Signaling Networks. , 2018, Chemical reviews.
[104] Hau B. Nguyen,et al. A New Protein-Protein Interaction Sensor Based on Tripartite Split-GFP Association , 2013, Scientific Reports.
[105] J. Grimm,et al. Synthesis of Janelia Fluor HaloTag and SNAP-Tag Ligands and Their Use in Cellular Imaging Experiments. , 2017, Methods in molecular biology.
[106] U. Rothlisberger,et al. Directed evolution of the suicide protein O⁶-alkylguanine-DNA alkyltransferase for increased reactivity results in an alkylated protein with exceptional stability. , 2012, Biochemistry.
[107] Michael Z. Lin,et al. Designs and sensing mechanisms of genetically encoded fluorescent voltage indicators. , 2015, Current opinion in chemical biology.
[108] E. Schreiter,et al. A general approach to engineer positive-going eFRET voltage indicators , 2019, bioRxiv.
[109] Dayu,et al. A genetically encoded fluorescent sensor for rapid and 1 specific in vivo detection of norepinephrine 2 3 , 2018 .
[110] Silke Kerruth,et al. Ultrafast glutamate sensors resolve high-frequency release at Schaffer collateral synapses , 2018, Proceedings of the National Academy of Sciences.
[111] R. Gainetdinov,et al. BRET biosensors to study GPCR biology, pharmacology, and signal transduction , 2012, Front. Endocrin..
[112] Mark J. Schnitzer,et al. Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors , 2014, Nature Communications.
[113] M. Bruchez,et al. Fluorogen activating protein toolset for protein trafficking measurements , 2020, Traffic.
[114] Douglas S Kim,et al. A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578 , 2018, BMC Biology.
[115] R Y Tsien,et al. Genetically encoded reporters of protein kinase A activity reveal impact of substrate tethering , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[116] Yulong Li,et al. G‐protein‐coupled receptor‐based sensors for imaging neurochemicals with high sensitivity and specificity , 2019, Journal of neurochemistry.
[117] Aequorea victoria’s secrets , 2019 .
[118] L. Pott,et al. Fluorescent biosensors for multiplexed imaging of phosphoinositide dynamics. , 2019, ACS chemical biology.
[119] Mark T. Harnett,et al. An optimized fluorescent probe for visualizing glutamate neurotransmission , 2013, Nature Methods.
[120] S. Boxer,et al. Split Green Fluorescent Proteins: Scope, Limitations, and Outlook. , 2019, Annual review of biophysics.
[121] Misha B. Ahrens,et al. Labeling of active neural circuits in vivo with designed calcium integrators , 2015, Science.