Compositional and functional diversities of core microbial communities in wild and artificial Ophiocordyceps sinensis

[1]  X. Cui,et al.  Endogenous bacteria inhabiting the Ophiocordyceps highlandensis during fruiting body development , 2021, BMC microbiology.

[2]  T. Oh,et al.  Complete Genome Sequence of Pedobacter sp. PAMC26386 and Their Low Temperature Application in Arabinose-containing Polysaccharides Degradation , 2021, Current Microbiology.

[3]  Daniel C W Tsang,et al.  Lignin valorization by bacterial genus Pseudomonas: State-of-the-art review and prospects. , 2020, Bioresource technology.

[4]  Xiaofei Ma,et al.  Bacterial community colonization on tire microplastics in typical urban water environments and associated impacting factors. , 2020, Environmental pollution.

[5]  F. Xia,et al.  Composition and predictive functional analysis of bacterial communities inhabiting Chinese Cordyceps insight into conserved core microbiome , 2019, BMC Microbiology.

[6]  K. Scow,et al.  Cover cropping and no-till increase diversity and symbiotroph:saprotroph ratios of soil fungal communities , 2019, Soil Biology and Biochemistry.

[7]  Alexander E. Kel,et al.  cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing , 2017, J. Comput. Biol..

[8]  J. Germida,et al.  Bacterial Root Microbiome of Plants Growing in Oil Sands Reclamation Covers , 2017, Front. Microbiol..

[9]  A. Pruden,et al.  Impact of water heater temperature setting and water use frequency on the building plumbing microbiome , 2017, The ISME Journal.

[10]  Juan Lin,et al.  High-throughput sequencing-based analysis of endogenetic fungal communities inhabiting the Chinese Cordyceps reveals unexpectedly high fungal diversity , 2016, Scientific Reports.

[11]  Juan Lin,et al.  Pyrosequencing analysis revealed complex endogenetic microorganism community from natural DongChong XiaCao and its microhabitat , 2016, BMC Microbiology.

[12]  B. Teh,et al.  Biodiversity and Activity of the Gut Microbiota across the Life History of the Insect Herbivore Spodoptera littoralis , 2016, Scientific Reports.

[13]  D. Sidransky,et al.  16S rRNA amplicon sequencing identifies microbiota associated with oral cancer, human papilloma virus infection and surgical treatment , 2016, Oncotarget.

[14]  Xingpeng Wang,et al.  Mucosal adherent bacterial dysbiosis in patients with colorectal adenomas , 2016, Scientific Reports.

[15]  J. Lalucat,et al.  Phylogenomics and systematics in Pseudomonas , 2015, Front. Microbiol..

[16]  Yi‐Jian Yao,et al.  Bacterial diversity in native habitats of the medicinal fungus Ophiocordyceps sinensis on Tibetan Plateau as determined using Illumina sequencing data. , 2015, FEMS microbiology letters.

[17]  Mark L Tamplin,et al.  High-throughput sequencing of microbial communities in Poro cheese, an artisanal Mexican cheese. , 2014, Food microbiology.

[18]  Xiao-jian Zhang,et al.  Operational performance, biomass and microbial community structure: impacts of backwashing on drinking water biofilter , 2014, Environmental Science and Pollution Research.

[19]  Robert C. Edgar,et al.  UPARSE: highly accurate OTU sequences from microbial amplicon reads , 2013, Nature Methods.

[20]  Pelin Yilmaz,et al.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools , 2012, Nucleic Acids Res..

[21]  Satoshi Yamamoto,et al.  High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples , 2012, PloS one.

[22]  William A. Walters,et al.  Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms , 2012, The ISME Journal.

[23]  B. Haas,et al.  Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. , 2011, Genome research.

[24]  Xingzhong Liu,et al.  High Diversity of the Fungal Community Structure in Naturally-Occurring Ophiocordyceps sinensis , 2010, PloS one.

[25]  S. Muthukrishnan,et al.  Insect chitinase and chitinase-like proteins , 2009, Cellular and Molecular Life Sciences.

[26]  A. Thierry,et al.  Safety assessment of dairy microorganisms: Propionibacterium and Bifidobacterium. , 2008, International journal of food microbiology.

[27]  Duochuan Li,et al.  Review of Fungal Chitinases , 2006, Mycopathologia.

[28]  K. Walters,et al.  Pathogenicity of the Entomopathogenic Fungus, Lecanicillium muscarium, against the Sweetpotato Whitefly Bemisia tabaci under Laboratory and Glasshouse Conditions , 2005, Mycopathologia.

[29]  I. Chet,et al.  The role of recognition in the induction of specific chitinases during mycoparasitism by Trichoderma harzianum. , 1995, Microbiology.

[30]  Erko Stackebrandt,et al.  Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology , 1994 .

[31]  C. Wang,et al.  Evolution of urban black and odorous water: The characteristics of microbial community and driving-factors. , 2022, Journal of environmental sciences.