Mechanisms of humic acids degradation by white rot fungi explored using 1H NMR spectroscopy and FTICR mass spectrometry.

Enzymatic activities involved in decay processes of natural aromatic macromolecules, such as humic acids (HA) and lignin by white rot fungi, have been widely investigated. However, the physical and chemical analysis of degradation products of these materials has not been intensively explored. Fourier transform cyclotron resonance mass spectrometry (FTICR MS) and 1H NMR as well as CHNOS and size exclusion chromatography were employed to study the mechanisms of HA degradation by Trametes sp. M23 and Phanerochaete sp. Y6. Size exclusion chromatography analyses demonstrate and provide evidence for HA breakdown into low MW compounds. The 1H NMR analysis revealed oxidation, a decrease in the aromatic content, and an indication of demethylation of the HA during biodegradation. Evidence for oxidation was also obtained using CHNOS. Analysis of FTICR MS results using a new software program developed by our group (David Mass Sort) revealed consecutive series of masses suggesting biochemical degradation trends such as oxidation, aromatic cleavage, and demethylation. These results are in agreement with the 1H NMR analysis and with the suggested role of the ligninolytic system leading to HA degradation.

[1]  Y. Hadar,et al.  Novel software for data analysis of Fourier transform ion cyclotron resonance mass spectra applied to natural organic matter. , 2010, Rapid communications in mass spectrometry : RCM.

[2]  Y. Hadar,et al.  Degradation and transformation of humic substances by saprotrophic fungi: processes and mechanisms , 2007 .

[3]  E. M. Perdue,et al.  High-precision frequency measurements: indispensable tools at the core of the molecular-level analysis of complex systems , 2007, Analytical and bioanalytical chemistry.

[4]  P. Schmitt‐Kopplin,et al.  Ultrahigh resolution mass spectrometry , 2007, Analytical and Bioanalytical Chemistry.

[5]  R. Sleighter,et al.  The application of electrospray ionization coupled to ultrahigh resolution mass spectrometry for the molecular characterization of natural organic matter. , 2007, Journal of mass spectrometry : JMS.

[6]  Y. Hadar,et al.  Humic acid bleaching by white-rot fungi isolated from biosolids compost , 2007 .

[7]  Sunghwan Kim,et al.  Direct molecular evidence for the degradation and mobility of black carbon in soils from ultrahigh-resolution mass spectral analysis of dissolved organic matter from a fire-impacted forest soil , 2006 .

[8]  T. Dittmar,et al.  From mass to structure: an aromaticity index for high‐resolution mass data of natural organic matter , 2006 .

[9]  A. Ishihara,et al.  Decolorization of Coal Humic Acid by Extracellular Enzymes Produced by White-Rot Fungi , 2005 .

[10]  M. Simpson,et al.  Phenanthrene sorption to structurally modified humic acids. , 2003, Journal of environmental quality.

[11]  A. Marshall,et al.  Exact masses and chemical formulas of individual Suwannee River fulvic acids from ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectra. , 2003, Analytical chemistry.

[12]  V. Römheld,et al.  Cadmium binding by fractions of dissolved organic matter and humic substances from municipal solid waste compost. , 2002, Journal of environmental quality.

[13]  M. Hofrichter,et al.  Degradation of Humic Acids by the Litter-Decomposing Basidiomycete Collybia dryophila , 2002, Applied and Environmental Microbiology.

[14]  N. Fujitake,et al.  Comparison of decolorization by microorganisms of humic acids with different 13C NMR properties. , 2002 .

[15]  A. Kurakov,et al.  Biochemical degradation of soil humic acids and fungal melanins , 2002 .

[16]  P. MacCarthy THE PRINCIPLES OF HUMIC SUBSTANCES , 2001 .

[17]  M. Hofrichter,et al.  Biodegradation of Humic Substances , 2001 .

[18]  Esham,et al.  Identification and characterization of humic substances-degrading bacterial isolates from an estuarine environment. , 2000, FEMS microbiology ecology.

[19]  A. Gamliel,et al.  Involvement of soluble organic matter in increased plant growth in solarized soils , 2000, Biology and Fertility of Soils.

[20]  R. Fakoussa,et al.  In vivo-decolorization of coal-derived humic acids by laccase-excreting fungus Trametes versicolor , 1999, Applied Microbiology and Biotechnology.

[21]  M. Hofrichter,et al.  Biotechnology and microbiology of coal degradation , 1999, Applied Microbiology and Biotechnology.

[22]  D. Ziegenhagen,et al.  Degradation of Soil Humic Extract by Wood- and Soil-Associated Fungi, Bacteria, and Commercial Enzymes , 1999, Microbial Ecology.

[23]  D. Lovley,et al.  Humic Acids as Electron Acceptors for Anaerobic Microbial Oxidation of Vinyl Chloride and Dichloroethene , 1998, Applied and Environmental Microbiology.

[24]  E. Roden,et al.  Recovery of Humic-Reducing Bacteria from a Diversity of Environments , 1998, Applied and Environmental Microbiology.

[25]  R. Fakoussa,et al.  Biological bleaching of water-soluble coal macromolecules by a basidiomycete strain , 1997, Applied Microbiology and Biotechnology.

[26]  R. Blondeau,et al.  13C NMR spectroscopic analysis of soil humic acids recovered after incubation with some white rot fungi and actinomycetes , 1992 .

[27]  R. Blondeau Biodegradation of Natural and Synthetic Humic Acids by the White Rot Fungus Phanerochaete chrysosporium , 1989, Applied and environmental microbiology.

[28]  James P. Martin,et al.  Mineralization of 14C-labelled humic acids and of humic-acid bound 14C-xenobiotics by Phanerochaete Chrysosporium , 1988 .