Oxygen concentration affects de novo DNA methylation and transcription in in vitro cultured oocytes

[1]  M. Pelinck,et al.  Reduced oxygen concentration during human IVF culture improves embryo utilization and cumulative pregnancy rates per cycle , 2020, Human reproduction open.

[2]  G. Kelsey,et al.  Genome-wide assessment of DNA methylation in mouse oocytes reveals effects associated with in vitro growth, superovulation, and sexual maturity , 2019, Clinical Epigenetics.

[3]  G. Kelsey,et al.  The role and mechanisms of DNA methylation in the oocyte , 2019, Essays in biochemistry.

[4]  S. Ozanne,et al.  Intrauterine programming of obesity and type 2 diabetes , 2019, Diabetologia.

[5]  Mohammad M. Karimi,et al.  LTR retrotransposons transcribed in oocytes drive species-specific and heritable changes in DNA methylation , 2018, Nature Communications.

[6]  S. Andrews,et al.  Transcription and chromatin determinants of de novo DNA methylation timing in oocytes , 2017, Epigenetics & Chromatin.

[7]  Kanako Morohaku,et al.  Complete in vitro generation of fertile oocytes from mouse primordial germ cells , 2016, Proceedings of the National Academy of Sciences.

[8]  G. Kelsey,et al.  Dynamic changes in histone modifications precede de novo DNA methylation in oocytes , 2015, Genes & development.

[9]  S. Andrews,et al.  Deep sequencing and de novo assembly of the mouse oocyte transcriptome define the contribution of transcription to the DNA methylation landscape , 2015, Genome Biology.

[10]  Scott B. Dewell,et al.  Engineering of a Histone-Recognition Domain in Dnmt3a Alters the Epigenetic Landscape and Phenotypic Features of Mouse ESCs. , 2015, Molecular cell.

[11]  J. Marioni,et al.  Genome-wide Bisulfite Sequencing in Zygotes Identifies Demethylation Targets and Maps the Contribution of TET3 Oxidation , 2014, Cell reports.

[12]  C. Schofield,et al.  Targeting histone lysine demethylases — Progress, challenges, and the future , 2014, Biochimica et biophysica acta.

[13]  T. Haaf,et al.  Human in vitro oocyte maturation is not associated with increased imprinting error rates at LIT1, SNRPN, PEG3 and GTL2. , 2014, Human reproduction.

[14]  Jun-ling Yang,et al.  Wnt/β-catenin signaling regulates follicular development by modulating the expression of Foxo3a signaling components , 2014, Molecular and Cellular Endocrinology.

[15]  Johan Smitz,et al.  Dynamics of Imprinted DNA Methylation and Gene Transcription for Imprinting Establishment in Mouse Oocytes in Relation to Culture Duration Variability1 , 2013, Biology of reproduction.

[16]  D. Monk,et al.  Stability of Genomic Imprinting and Gestational-Age Dynamic Methylation in Complicated Pregnancies Conceived Following Assisted Reproductive Technologies1 , 2013, Biology of reproduction.

[17]  M. J. de los Santos,et al.  Reduced oxygen tension improves embryo quality but not clinical pregnancy rates: a randomized clinical study into ovum donation cycles. , 2013, Fertility and sterility.

[18]  H. Sasaki,et al.  Mouse Oocyte Methylomes at Base Resolution Reveal Genome-Wide Accumulation of Non-CpG Methylation and Role of DNA Methyltransferases , 2013, PLoS genetics.

[19]  Zachary D. Smith,et al.  DNA methylation: roles in mammalian development , 2013, Nature Reviews Genetics.

[20]  H. Ohta,et al.  Offspring from Oocytes Derived from in Vitro Primordial Germ Cell–like Cells in Mice , 2012, Science.

[21]  V. Rakyan,et al.  Protection against De Novo Methylation Is Instrumental in Maintaining Parent-of-Origin Methylation Inherited from the Gametes , 2012, Molecular cell.

[22]  Hualiang Jiang,et al.  Chemical and biochemical approaches in the study of histone methylation and demethylation , 2012, Medicinal research reviews.

[23]  A. Rajkovic,et al.  Oogenesis: Transcriptional regulators and mouse models , 2012, Molecular and Cellular Endocrinology.

[24]  Yutaka Suzuki,et al.  Contribution of Intragenic DNA Methylation in Mouse Gametic DNA Methylomes to Establish Oocyte-Specific Heritable Marks , 2012, PLoS genetics.

[25]  A. Ferguson-Smith Genomic imprinting: the emergence of an epigenetic paradigm , 2011, Nature Reviews Genetics.

[26]  S. Andrews,et al.  Dynamic CpG island methylation landscape in oocytes and preimplantation embryos , 2011, Nature Genetics.

[27]  Felix Krueger,et al.  Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications , 2011, Bioinform..

[28]  Robert S. Illingworth,et al.  Orphan CpG Islands Identify Numerous Conserved Promoters in the Mammalian Genome , 2010, PLoS genetics.

[29]  J. Labbé,et al.  Loss of human Greatwall results in G2 arrest and multiple mitotic defects due to deregulation of the cyclin B-Cdc2/PP2A balance , 2010, Proceedings of the National Academy of Sciences.

[30]  K. Nakagawa,et al.  A study of the effect of an extremely low oxygen concentration on the development of human embryos in assisted reproductive technology , 2010, Reproductive medicine and biology.

[31]  E. Li,et al.  KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints , 2009, Nature.

[32]  T. Adriaenssens,et al.  Quantification of oocyte-specific transcripts in follicle-enclosed oocytes during antral development and maturation in vitro. , 2009, Molecular human reproduction.

[33]  R. Ferriani,et al.  Abnormal methylation at the KvDMR1 imprinting control region in clinically normal children conceived by assisted reproductive technologies. , 2009, Molecular human reproduction.

[34]  M. Szydłowski,et al.  Supplements to in vitro maturation media affect the production of bovine blastocysts and their apoptotic index but not the proportions of matured and apoptotic oocytes. , 2007, Animal reproduction science.

[35]  Min Gyu Lee,et al.  Histone H3 lysine 4 demethylation is a target of nonselective antidepressive medications. , 2006, Chemistry & biology.

[36]  H. Hiura,et al.  Oocyte growth‐dependent progression of maternal imprinting in mice , 2006, Genes to cells : devoted to molecular & cellular mechanisms.

[37]  S. Hammes,et al.  Epidermal growth factor receptor signaling is required for normal ovarian steroidogenesis and oocyte maturation. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[38]  A. Gnirke,et al.  Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis , 2005, Nucleic acids research.

[39]  B. Horsthemke,et al.  Increased prevalence of imprinting defects in patients with Angelman syndrome born to subfertile couples , 2005, Journal of Medical Genetics.

[40]  Yang Shi,et al.  Histone Demethylation Mediated by the Nuclear Amine Oxidase Homolog LSD1 , 2004, Cell.

[41]  Antoine Flahault,et al.  In vitro fertilization may increase the risk of Beckwith-Wiedemann syndrome related to the abnormal imprinting of the KCN1OT gene. , 2003, American journal of human genetics.

[42]  W. Reik,et al.  Beckwith-Wiedemann syndrome and assisted reproduction technology (ART) , 2003, Journal of medical genetics.

[43]  Bai-Lin Wu,et al.  Intracytoplasmic sperm injection may increase the risk of imprinting defects. , 2002, American journal of human genetics.

[44]  Y. Obata,et al.  Maternal Primary Imprinting Is Established at a Specific Time for Each Gene throughout Oocyte Growth* , 2002, The Journal of Biological Chemistry.

[45]  D. Gardner,et al.  Noninvasive assessment of human embryo nutrient consumption as a measure of developmental potential. , 2000, Fertility and sterility.

[46]  J. Catt,et al.  Toxic effects of oxygen on human embryo development. , 2000, Human reproduction.

[47]  J. Eppig,et al.  Factors affecting the developmental competence of mouse oocytes grown in vitro: follicle-stimulating hormone and insulin. , 1998, Biology of reproduction.

[48]  P. Giorgi Rossi,et al.  Meiotic and developmental competence of mouse antral oocytes. , 1998, Biology of reproduction.

[49]  M. Antczak,et al.  The developmental potential of the human oocyte is related to the dissolved oxygen content of follicular fluid: association with vascular endothelial growth factor levels and perifollicular blood flow characteristics. , 1997, Human reproduction.

[50]  K. Wigglesworth,et al.  Factors affecting the developmental competence of mouse oocytes grown in vitro: Oxygen concentration , 1995, Molecular reproduction and development.

[51]  R. Schultz,et al.  Temporal pattern of synthesis of the mouse cortical granule protein, p75, during oocyte growth and maturation. , 1992, Developmental biology.

[52]  K. Abe,et al.  Large-scale production of growing oocytes in vitro from neonatal mouse ovaries. , 2009, The International journal of developmental biology.

[53]  G. Kelsey,et al.  Transcription is required for establishment of germline methylation marks at imprinted genes. , 2009, Genes & development.

[54]  T. Arima,et al.  Aberrant DNA methylation of imprinted loci in superovulated oocytes. , 2007, Human reproduction.

[55]  Andrew P Feinberg,et al.  Association of in vitro fertilization with Beckwith-Wiedemann syndrome and epigenetic alterations of LIT1 and H19. , 2003, American journal of human genetics.

[56]  Hilde van der Togt,et al.  Publisher's Note , 2003, J. Netw. Comput. Appl..

[57]  K. Buiting,et al.  Another case of imprinting defect in a girl with Angelman syndrome who was conceived by intracytoplasmic semen injection. , 2003, American journal of human genetics.

[58]  Wendy Dean,et al.  Dynamic reprogramming of DNA methylation in the early mouse embryo. , 2002, Developmental biology.