Genomic footprinting reveals cell type-specific DNA binding of ubiquitous factors
暂无分享,去创建一个
[1] G. Church,et al. Cell-type-specific contacts to immunoglobulin enhancers in nuclei , 1985, Nature.
[2] A. Bird. CpG-rich islands and the function of DNA methylation , 1986, Nature.
[3] T. Maniatis,et al. Regulation of inducible and tissue-specific gene expression. , 1987, Science.
[4] W. Gilbert,et al. An amino-terminal fragment of lac repressor binds specifically to lac operator. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[5] W. Schaffner,et al. Cell type‐specificity elements of the immunoglobulin heavy chain gene enhancer. , 1987, The EMBO journal.
[6] P. Sharp,et al. A lymphoid-specific protein binding to the octamer motif of immunoglobulin genes , 1986, Nature.
[7] O. Greengard. CHAPTER 2 – The Developmental Formation of Enzymes in Rat Liver , 1970 .
[8] W. Gilbert,et al. Sequencing end-labeled DNA with base-specific chemical cleavages. , 1980, Methods in enzymology.
[9] F. Sanger,et al. DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.
[10] J. Vieira,et al. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments. , 1982, Gene.
[11] U. Pettersson,et al. Rapid and quantitative recovery of DNA fragments from gels by displacement electrophoresis (isotachophoresis). , 1984, Biochimica et biophysica acta.
[12] D. Galas,et al. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity. , 1978, Nucleic acids research.
[13] G. Rubin,et al. The effect of chromosomal position on the expression of the drosophila xanthine dehydrogenase gene , 1983, Cell.
[14] U. Schibler,et al. Tissue-specific in vitro transcription from the mouse albumin promoter , 1986, Cell.
[15] S. Gluecksohn-waelsch. Regulatory genes in development , 1987 .
[16] D. Crothers,et al. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis. , 1981, Nucleic acids research.
[17] B. Gloss,et al. In vivo protein–DNA interactions in a glucocorticoid response element require the presence of the hormone , 1986, Nature.
[18] R. Kornberg,et al. Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones , 1987, Cell.
[19] David Baltimore,et al. Multiple nuclear factors interact with the immunoglobulin enhancer sequences , 1986, Cell.
[20] H. Richard-Foy,et al. Sequence‐specific positioning of nucleosomes over the steroid‐inducible MMTV promoter. , 1987, The EMBO journal.
[21] J. Jiricny,et al. Genomic sequencing reveals a positive correlation between the kinetics of strand-specific DNA demethylation of the overlapping estradiol/glucocorticoid-receptor binding sites and the rate of avian vitellogenin mRNA synthesis. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[22] M. Ptashne,et al. Specific DNA binding of GAL4, a positive regulatory protein of yeast , 1985, Cell.
[23] G. Church,et al. Genomic sequencing. , 1993, Methods in molecular biology.
[24] H. Sambrook. Molecular cloning : a laboratory manual. Cold Spring Harbor, NY , 1989 .
[25] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .
[26] R. Tjian,et al. Purified transcription factor AP-1 interacts with TPA-inducible enhancer elements , 1987, Cell.
[27] H. Zachau,et al. Sequences closely related to an immunoglobulin gene promoter/enhancer element occur also upstream of other eukaryotic and of prokaryotic genes. , 1986, Nucleic acids research.
[28] H. Cedar,et al. Muscle-specific activation of a methylated chimeric actin gene , 1986, Cell.
[29] W. Doerfler,et al. DNA methylation and gene activity. , 1983, Annual review of biochemistry.
[30] G. Hager,et al. Steroid-dependent interaction of transcription factors with the inducible promoter of mouse mammary tumor virus in vivo , 1987, Cell.
[31] G. H. Thomas,et al. Selected topics in chromatin structure. , 1985, Annual review of genetics.
[32] D. Kioussis,et al. β-Globin gene inactivation by DNA translocation in γβ-thalassaemi , 1983, Nature.
[33] P. Sharp,et al. Distinct factors bind to apparently homolgous sequences in the immunoglobulin heavy-chain enhancer , 1986, Nature.
[34] M. Karin,et al. A pituitary-specific trans-acting factor can stimulate transcription from the growth hormone promoter in extracts of nonexpressing cells , 1987, Cell.
[35] R. Roeder,et al. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. , 1983, Nucleic acids research.
[36] W. Gilbert,et al. Detection of cytosine methylation in the maize alcohol dehydrogenase gene by genomic sequencing , 1986, Nature.
[37] M. M. Garner,et al. A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system , 1981, Nucleic Acids Res..
[38] G. Church,et al. B lineage--specific interactions of an immunoglobulin enhancer with cellular factors in vivo. , 1985, Science.
[39] Carl Wu,et al. Induction of sequence-specific binding of Drosophila heat shock activator protein without protein synthesis , 1987, Nature.
[40] K. Martin,et al. The DNA loop model for ara repression: AraC protein occupies the proposed loop sites in vivo and repression-negative mutations lie in these same sites. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[41] D. Jump,et al. Transcriptional activation of the rat liver S14 gene during postnatal development. , 1988, The Journal of biological chemistry.
[42] T. Maniatis,et al. Detection of factors that interact with the human β-interferon regulatory region in vivo by DNAase I footprinting , 1986, Cell.
[43] K. Yamamoto,et al. Steroid receptor regulated transcription of specific genes and gene networks. , 1985, Annual review of genetics.
[44] P. Tucker,et al. Interaction of cell-type-specific nuclear proteins with immunoglobulin VH promoter region sequences , 1986, Nature.
[45] J. Svoboda. Presence of Chicken Tumour Virus in the Sarcoma of the Adult Rat inoculated after Birth with Rous Sarcoma Tissue , 1960, Nature.
[46] Robert Tjian,et al. Control of eukaryotic messenger RNA synthesis by sequence-specific DNA-binding proteins , 1985, Nature.
[47] G. Stein,et al. Protein-DNA interactions in vivo upstream of a cell cycle-regulated human H4 histone gene. , 1987, Science.
[48] G. Schütz,et al. Tissue‐specific DNaseI hypersensitive sites in the 5′‐flanking sequences of the tryptophan oxygenase and the tyrosine aminotransferase genes. , 1984, The EMBO journal.
[49] G. Schütz,et al. Transcription activation of the tyrosine aminotransferase gene by glucocorticoids and cAMP in primary hepatocytes. , 1987, European journal of biochemistry.
[50] P. Chambon,et al. Stimulation of in vitro transcription from the SV40 early promoter by the enhancer involves a specific trans‐acting factor. , 1984, The EMBO journal.
[51] M. Karin,et al. Phorbol ester-inducible genes contain a common cis element recognized by a TPA-modulated trans-acting factor , 1987, Cell.
[52] H. Zentgraf,et al. Isolation and characterization of the rat tyrosine aminotransferase gene. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[53] H. Schöler,et al. Nuclear factors binding specific sequences within the immunoglobulin enhancer interact differentially with other enhancer elements. , 1986, The EMBO journal.
[54] G. Felsenfeld,et al. A method for mapping intranuclear protein-DNA interactions and its application to a nuclease hypersensitive site. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[55] P. Chambon,et al. The mouse immunoglobulin heavy‐chain enhancer: effect on transcription in vitro and binding of proteins present in HeLa and lymphoid B cell extracts. , 1986, The EMBO journal.
[56] W. Gilbert,et al. Detection in vivo of protein-DNA interactions within the lac operon of Escherichia coli , 1985, Nature.
[57] B. Gloss,et al. Cooperativity of glucocorticoid response elements located far upstream of the tyrosine aminotransferase gene , 1987, Cell.