Multi-vendor standardized sequence for edited magnetic resonance spectroscopy

ABSTRACT Spectral editing allows direct measurement of low‐concentration metabolites, such as GABA, glutathione (GSH) and lactate (Lac), relevant for understanding brain (patho)physiology. The most widely used spectral editing technique is MEGA‐PRESS, which has been diversely implemented across research sites and vendors, resulting in variations in the final resolved edited signal. In this paper, we describe an effort to develop a new universal MEGA‐PRESS sequence with HERMES functionality for the major MR vendor platforms with standardized RF pulse shapes, durations, amplitudes and timings. New RF pulses were generated for the universal sequence. Phantom experiments were conducted on Philips, Siemens, GE and Canon 3T MRI scanners using 32‐channel head coils. In vivo experiments were performed on the same six subjects on Philips and Siemens scanners, and on two additional subjects, one on GE and one on Canon scanners. On each platform, edited MRS experiments were conducted with the vendor‐native and universal MEGA‐PRESS sequences for GABA (TE=68ms) and Lac editing (TE=140ms). Additionally, HERMES for GABA and GSH was performed using the universal sequence at TE=80ms. The universal sequence improves inter‐vendor similarity of GABA‐edited and Lac‐edited MEGA‐PRESS spectra. The universal HERMES sequence yields both GABA‐ and GSH‐edited spectra with negligible levels of crosstalk on all four platforms, and with strong agreement among vendors for both edited spectra. In vivo GABA+/Cr, Lac/Cr and GSH/Cr ratios showed relatively low variation between scanners using the universal sequence. In conclusion, phantom and in vivo experiments demonstrate successful implementation of the universal sequence across all four major vendors, allowing editing of several metabolites across a range of TEs.

[1]  Michael Schär,et al.  HERMES: Hadamard encoding and reconstruction of MEGA‐edited spectroscopy , 2016, Magnetic resonance in medicine.

[2]  A. Lent,et al.  Computer-optimized narrowband pulses for multislice imaging , 1987 .

[3]  C. John Evans,et al.  Current practice in the use of MEGA-PRESS spectroscopy for the detection of GABA , 2014, NeuroImage.

[4]  R. B. Kingsley,et al.  WET, a T1- and B1-insensitive water-suppression method for in vivo localized 1H NMR spectroscopy. , 1994, Journal of magnetic resonance. Series B.

[5]  Dennis W J Klomp,et al.  Short echo time 1H‐MRSI of the human brain at 3T with minimal chemical shift displacement errors using adiabatic refocusing pulses , 2008, Magnetic resonance in medicine.

[6]  Peter Jezzard,et al.  Advanced processing and simulation of MRS data using the FID appliance (FID‐A)—An open source, MATLAB‐based toolkit , 2017, Magnetic resonance in medicine.

[7]  Dikoma C. Shungu,et al.  N-Acetylcysteine for the Treatment of Glutathione Deficiency and Oxidative Stress in Schizophrenia , 2012, Biological Psychiatry.

[8]  Robin A. de Graaf,et al.  In Vivo NMR Spectroscopy , 2019 .

[9]  Kimberly L Chan,et al.  Frequency and phase correction for multiplexed edited MRS of GABA and glutathione , 2018, Magnetic resonance in medicine.

[10]  R. Edden,et al.  Effects of eddy currents on selective spectral editing experiments at 3T , 2018, Journal of magnetic resonance imaging : JMRI.

[11]  Judith E. Hall,et al.  Edited MRS is sensitive to changes in lactate concentration during inspiratory hypoxia , 2010, Journal of magnetic resonance imaging : JMRI.

[12]  T L Chenevert,et al.  Decreased motor cortex γ-aminobutyric acid in amyotrophic lateral sclerosis , 2012, Neurology.

[13]  F. Di Salle,et al.  Proton MRS in neurological disorders. , 1999, European journal of radiology.

[14]  K. McGraw,et al.  Forming inferences about some intraclass correlation coefficients. , 1996 .

[15]  R. Edden,et al.  Gannet: A batch‐processing tool for the quantitative analysis of gamma‐aminobutyric acid–edited MR spectroscopy spectra , 2014, Journal of magnetic resonance imaging : JMRI.

[16]  C. Rae A Guide to the Metabolic Pathways and Function of Metabolites Observed in Human Brain 1H Magnetic Resonance Spectra , 2013, Neurochemical Research.

[17]  Petroc Sumner,et al.  Comparison of the repeatability of GABA‐edited magnetic resonance spectroscopy with and without macromolecule suppression , 2016, Magnetic resonance in medicine.

[18]  M. Garwood,et al.  Simultaneous in vivo spectral editing and water suppression , 1998, NMR in biomedicine.

[19]  A. Doerfler,et al.  In vivo quantification of intracerebral GABA by single-voxel (1)H-MRS-How reproducible are the results? , 2010, European journal of radiology.

[20]  David J McGonigle,et al.  Diurnal stability of γ‐aminobutyric acid concentration in visual and sensorimotor cortex , 2009, Journal of magnetic resonance imaging : JMRI.

[21]  D. Weinberger,et al.  Reproducibility of prefrontal γ‐aminobutyric acid measurements with J‐edited spectroscopy , 2011, NMR in biomedicine.

[22]  P. Bottomley Spatial Localization in NMR Spectroscopy in Vivo , 1987, Annals of the New York Academy of Sciences.

[23]  Michael-Paul Schallmo,et al.  Big GABA: Edited MR spectroscopy at 24 research sites , 2017, NeuroImage.

[24]  X. Mao,et al.  Motor cortex glutathione deficit in ALS measured in vivo with the J-editing technique , 2014, Neuroscience Letters.

[25]  André J. W. van der Kouwe,et al.  Reproducibility of macromolecule suppressed GABA measurement using motion and shim navigated MEGA-SPECIAL with LCModel, jMRUI and GANNET , 2016, Magnetic Resonance Materials in Physics, Biology and Medicine.

[26]  Kenneth Hugdahl,et al.  Within‐ and between‐session reproducibility of GABA measurements with MR spectroscopy , 2017, Journal of magnetic resonance imaging : JMRI.

[27]  S. Williams,et al.  Glutathione in the human brain: Review of its roles and measurement by magnetic resonance spectroscopy. , 2017, Analytical biochemistry.

[28]  Richard A. E. Edden,et al.  Simultaneous edited MRS of GABA and glutathione , 2016, NeuroImage.

[29]  Xiangling Mao,et al.  Brain γ‐aminobutyric acid (GABA) detection in vivo with the J‐editing 1H MRS technique: a comprehensive methodological evaluation of sensitivity enhancement, macromolecule contamination and test–retest reliability , 2016, NMR in biomedicine.

[30]  Yi-Ching Lynn Ho,et al.  Long-term reproducibility of GABA magnetic resonance spectroscopy , 2014, NeuroImage.

[31]  Peter B Barker,et al.  Normalizing data from GABA-edited MEGA-PRESS implementations at 3 Tesla. , 2017, Magnetic resonance imaging.

[32]  Kimberly L. Chan,et al.  Simultaneous editing of GABA and glutathione at 7T using semi‐LASER localization , 2018, Magnetic resonance in medicine.

[33]  Muhammad G Saleh,et al.  Edited 1H magnetic resonance spectroscopy in vivo: Methods and metabolites , 2017, Magnetic resonance in medicine.

[34]  R. Gruetter,et al.  In vivo 1H NMR spectroscopy of rat brain at 1 ms echo time , 1999, Magnetic resonance in medicine.

[35]  Jamie Near,et al.  Volumetric navigated MEGA‐SPECIAL for real‐time motion and shim corrected GABA editing , 2016, NMR in biomedicine.

[36]  P. Matthews,et al.  Rapid modulation of GABA concentration in human sensorimotor cortex during motor learning. , 2006, Journal of neurophysiology.

[37]  Michael Schär,et al.  Prospective frequency correction for macromolecule‐suppressed GABA editing at 3T , 2016, Journal of magnetic resonance imaging : JMRI.

[38]  Peter B Barker,et al.  Spatial effects in the detection of γ‐aminobutyric acid: Improved sensitivity at high fields using inner volume saturation , 2007, Magnetic resonance in medicine.

[39]  R. Edden,et al.  Inhibitory motor dysfunction in parkinson's disease subtypes , 2018, Journal of magnetic resonance imaging : JMRI.

[40]  Geoffrey Bodenhausen,et al.  Suppression of artifacts in two-dimensional J spectroscopy , 1977 .