An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer
暂无分享,去创建一个
H. Hotz | M. Bühler | Y. Shimada | F. Allain | P. Barraud | Stephan Emmerth
[1] Frédéric H.-T. Allain,et al. The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove , 2010, Cell.
[2] R. Ketting,et al. The role of small non-coding RNAs in genome stability and chromatin organization , 2010, Journal of Cell Science.
[3] C. Pannecouque,et al. Inhibition of HIV-1 Replication by a Bis-Thiadiazolbenzene-1,2-Diamine That Chelates Zinc Ions from Retroviral Nucleocapsid Zinc Fingers , 2010, Antimicrobial Agents and Chemotherapy.
[4] M. Bühler,et al. Nuclear retention of fission yeast dicer is a prerequisite for RNAi-mediated heterochromatin assembly. , 2010, Developmental cell.
[5] P. Zamore,et al. Small silencing RNAs: an expanding universe , 2009, Nature Reviews Genetics.
[6] D. Moazed. Small RNAs in transcriptional gene silencing and genome defence , 2009, Nature.
[7] Mikiko C. Siomi,et al. The Discovery of Rna Interference (rnai) Biogenesis of Small Rnas on the Road to Reading the Rna-interference Code Insight Review , 2022 .
[8] Geoffrey J. Barton,et al. Jalview Version 2—a multiple sequence alignment editor and analysis workbench , 2009, Bioinform..
[9] M. Jantsch,et al. RNA-Regulated Interaction of Transportin-1 and Exportin-5 with the Double-Stranded RNA-Binding Domain Regulates Nucleocytoplasmic Shuttling of ADAR1 , 2009, Molecular and Cellular Biology.
[10] Rodrigo Lopez,et al. Clustal W and Clustal X version 2.0 , 2007, Bioinform..
[11] A. Brunger. Version 1.2 of the Crystallography and NMR system , 2007, Nature Protocols.
[12] D. Moazed,et al. Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi. , 2007, Molecular cell.
[13] Marc Bühler,et al. Tethering RITS to a Nascent Transcript Initiates RNAi- and Heterochromatin-Dependent Gene Silencing , 2006, Cell.
[14] F. Allain,et al. Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs. , 2006, Structure.
[15] Angela N. Brooks,et al. Structural Basis for Double-Stranded RNA Processing by Dicer , 2006, Science.
[16] Anne Gatignol,et al. TRBP, a regulator of cellular PKR and HIV‐1 virus expression, interacts with Dicer and functions in RNA silencing , 2005, EMBO reports.
[17] R. Shiekhattar,et al. TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing , 2005, Nature.
[18] T. Sugiyama,et al. Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome , 2005, Nature Genetics.
[19] A. Denli,et al. Normal microRNA Maturation and Germ-Line Stem Cell Maintenance Requires Loquacious, a Double-Stranded RNA-Binding Domain Protein , 2005, PLoS biology.
[20] Kuniaki Saito,et al. Processing of Pre-microRNAs by the Dicer-1–Loquacious Complex in Drosophila Cells , 2005, PLoS biology.
[21] T. Sugiyama,et al. RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[22] S. Gygi,et al. Two RNAi Complexes, RITS and RDRC, Physically Interact and Localize to Noncoding Centromeric RNAs , 2004, Cell.
[23] H. Dyson,et al. ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module. , 2004, Journal of molecular biology.
[24] D. Baulcombe. RNA silencing in plants , 2004, Nature.
[25] I. Macara,et al. Nucleocytoplasmic Shuttling of JAZ, a New Cargo Protein for Exportin-5 , 2004, Molecular and Cellular Biology.
[26] Luc DesGroseillers,et al. The Brain-specific Double-stranded RNA-binding Protein Staufen2 , 2004, Journal of Biological Chemistry.
[27] M. Ares,et al. A new α‐helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III , 2004 .
[28] Anthony Henras,et al. Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[29] Songtao Jia,et al. RNAi-Mediated Targeting of Heterochromatin by the RITS Complex , 2004, Science.
[30] Catherine Dargemont,et al. Minihelix-containing RNAs Mediate Exportin-5-dependent Nuclear Export of the Double-stranded RNA-binding Protein ILF3* , 2004, Journal of Biological Chemistry.
[31] Xiaodong Wang,et al. R2D2, a Bridge Between the Initiation and Effector Steps of the Drosophila RNAi Pathway , 2003, Science.
[32] G. Barber,et al. The dsRNA binding protein family: critical roles, diverse cellular functions , 2003, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[33] K. Wüthrich,et al. Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS , 2002, Journal of biomolecular NMR.
[34] M. Hallegger,et al. Nucleocytoplasmic distribution of human RNA-editing enzyme ADAR1 is modulated by double-stranded RNA-binding domains, a leucine-rich export signal, and a putative dimerization domain. , 2002, Molecular biology of the cell.
[35] Michael Q. Zhang,et al. The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. , 2002, Genes & development.
[36] B. Samuelsson,et al. Ribonuclease activity and RNA binding of recombinant human Dicer , 2002, The EMBO journal.
[37] D. Sahagian,et al. El Niño Events Recorded by Stalagmite Carbon Isotopes , 2002, Science.
[38] B. Reinhart,et al. Small RNAs Correspond to Centromere Heterochromatic Repeats , 2002, Science.
[39] Ira M. Hall,et al. Regulation of Heterochromatic Silencing and Histone H3 Lysine-9 Methylation by RNAi , 2002, Science.
[40] Torsten Herrmann,et al. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. , 2002, Journal of molecular biology.
[41] W. Filipowicz,et al. Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[42] D. Auld. Zinc coordination sphere in biochemical zinc sites , 2001, Biometals.
[43] A. Pasquinelli,et al. Genes and Mechanisms Related to RNA Interference Regulate Expression of the Small Temporal RNAs that Control C. elegans Developmental Timing , 2001, Cell.
[44] P. Wright,et al. Zinc finger proteins: new insights into structural and functional diversity. , 2001, Current opinion in structural biology.
[45] M. Mathews,et al. Proteins binding to duplexed RNA: one motif, multiple functions. , 2000, Trends in biochemical sciences.
[46] Gabriele Varani,et al. RNA recognition by a Staufen double‐stranded RNA‐binding domain , 2000, The EMBO journal.
[47] S C Schultz,et al. Molecular basis of double‐stranded RNA‐protein interactions: structure of a dsRNA‐binding domain complexed with dsRNA , 1998, The EMBO journal.
[48] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[49] P. Philippsen,et al. Heterologous modules for efficient and versatile PCR‐based gene targeting in Schizosaccharomyces pombe , 1998, Yeast.
[50] I. Chernushevich,et al. Electrospray mass spectrometry studies of non-heme iron-containing proteins. , 1998, Analytical chemistry.
[51] K. Wüthrich,et al. Torsion angle dynamics for NMR structure calculation with the new program DYANA. , 1997, Journal of molecular biology.
[52] J. Thornton,et al. AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR , 1996, Journal of biomolecular NMR.
[53] M. Billeter,et al. MOLMOL: a program for display and analysis of macromolecular structures. , 1996, Journal of molecular graphics.
[54] L. Arthur,et al. Inhibitors of HIV Nucleocapsid Protein Zinc Fingers as Candidates for the Treatment of AIDS , 1995, Science.
[55] A. Murzin,et al. NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N‐terminal domain of ribosomal protein S5. , 1995, The EMBO journal.
[56] T. Gibson,et al. Structure of the dsRNA binding domain of E. coli RNase III. , 1995, The EMBO journal.
[57] C. Burd,et al. Conserved structures and diversity of functions of RNA-binding proteins. , 1994, Science.
[58] B. Bass,et al. Binding properties of newly identified Xenopus proteins containing dsRNA-binding motifs , 1994, Current Biology.
[59] D. Torchia,et al. Tautomeric states of the active‐site histidines of phosphorylated and unphosphorylated IIIGlc, a signal‐transducing protein from escherichia coli, using two‐dimensional heteronuclear NMR techniques , 1993, Protein science : a publication of the Protein Society.
[60] D. St Johnston,et al. A conserved double-stranded RNA-binding domain. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[61] A Klug,et al. Solution structures of two zinc-finger domains from SWI5 obtained using two-dimensional 1H nuclear magnetic resonance spectroscopy. A zinc-finger structure with a third strand of beta-sheet. , 1992, Journal of molecular biology.
[62] Dimos Gaidatzis,et al. Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe , 2011, Nature Structural &Molecular Biology.
[63] S. Elgin,et al. Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast. , 2009, Biochimica et biophysica acta.
[64] Martin J. Simard,et al. Argonaute proteins: key players in RNA silencing , 2008, Nature Reviews Molecular Cell Biology.
[65] M. Ares,et al. A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III. , 2004, The EMBO journal.
[66] P. Güntert. Automated NMR structure calculation with CYANA. , 2004, Methods in molecular biology.
[67] T. Volpe,et al. RNA interference is required for normal centromere function infission yeast , 2004, Chromosome Research.
[68] Miron Livny,et al. RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank , 2005, Proteins.