Nuclear to cytoplasmic ratio & cellbody analysis of virtual biopsy images for diagnosing diseases

Traditional biopsy procedure require invasive tissue removal from a living subject, followed by time-consumin and complicated processes, so noninvasive in vivo virtual biopsy, which possesses the ability to obtain exhaustive tissue images without removing tissues, is highly desired. Some sets of in vivo virtual biopsy images provided by healthy volunteers were processed by cell segmentation approach, which is based on the watershed-based approach, Genetic algorithm and the concept of convergence index filter for automatic cell segmentation. Experimental results suggest that the proposed algorithm not only reveals high accuracy for cell segmentation but also has dramatic potential for noninvasive analysis of cell nuclear-to-cytoplasmic ratio (NC ratio), also detecting the cell body size, area or shape to locate their positions or measure useful properties using Genetic Algorithm, which is important in identifying or detecting early symptoms of diseases such as skin cancers, skin aging and oral mucosa cancer during clinical diagnosis via medical imaging analysis.

[1]  Tsang,et al.  Optical third-harmonic generation at interfaces. , 1995, Physical review. A, Atomic, molecular, and optical physics.

[2]  S Muthukumar,et al.  Genetic Approach on Medical Image Segmentation by Generalized Spatial Fuzzy C- Means Algorithm , 2010 .

[3]  Luc Vincent,et al.  Watersheds in Digital Spaces: An Efficient Algorithm Based on Immersion Simulations , 1991, IEEE Trans. Pattern Anal. Mach. Intell..

[4]  Azriel Rosenfeld,et al.  Sequential Operations in Digital Picture Processing , 1966, JACM.

[5]  Hidefumi Kobatake,et al.  Convergence index filter for vector fields , 1999, IEEE Trans. Image Process..

[6]  Mary Anne L. Egan,et al.  Locating clusters in noisy data: a genetic fuzzy c-means clustering algorithm , 1998, 1998 Conference of the North American Fuzzy Information Processing Society - NAFIPS (Cat. No.98TH8353).

[7]  John M. Gauch,et al.  Image segmentation and analysis via multiscale gradient watershed hierarchies , 1999, IEEE Trans. Image Process..

[8]  Wilhelm Burger,et al.  Digital Image Processing - An Algorithmic Introduction using Java , 2008, Texts in Computer Science.

[9]  Andrius Usinskas,et al.  A SURVEY OF GENETIC ALGORITHMS APPLICATIONS FOR IMAGE ENHANCEMENT AND SEGMENTATION , 2007 .

[10]  Chi-Kuang Sun,et al.  Higher harmonic generation microscopy. , 2005, Advances in biochemical engineering/biotechnology.

[11]  Ming-Shaung Ju,et al.  Nerve Cell Segmentation via Multi-Scale Gradient Watershed Hierarchies , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[12]  David J. Evans,et al.  A parallel genetic algorithm for cell image segmentation , 2001, Electron. Notes Theor. Comput. Sci..

[13]  Christopher G. Harris,et al.  A Combined Corner and Edge Detector , 1988, Alvey Vision Conference.

[14]  Chi-Kuang Sun,et al.  In vivo optical virtual biopsy of human oral mucosa with harmonic generation microscopy , 2011, Biomedical optics express.

[15]  Chi-Kuang Sun,et al.  In vivo harmonic generation biopsy of human skin. , 2009, Journal of biomedical optics.

[16]  Chi‐Kuang Sun,et al.  In Vivo Virtual Biopsy of Human Skin by Using Noninvasive Higher Harmonic Generation Microscopy , 2010, IEEE Journal of Selected Topics in Quantum Electronics.

[17]  Sharifi Nourieh,et al.  Cytodiagnosis of Cutaneous Basal and Squamous Cell Carcinoma , 2007 .

[18]  Gwo Giun Lee,et al.  Cell segmentation and NC ratio analysis of third harmonic generation virtual biopsy images based on marker-controlled gradient watershed algorithm , 2012, 2012 IEEE International Symposium on Circuits and Systems.