Joint LMMSE Estimation of DWI Data for DTI Processing

We propose a new methodology for Linear Minimum Mean Square Error (LMMSE) filtering of Diffusion Weighted Imaging (DWI). We consider each voxel as an N-dimensional vector that comprises all the DWI volumes, and then compute the LMMSE estimator for the whole DWI data set jointly, taking into account the underlying tensor model. Our experiments, both with phantom and real data, show that this is a more convenient approach compared to the separate processing of each DWI, that translates to better removal of noise and preservation of structural information. Besides, our model has a simple algebraic formulation which makes the overall computational complexity very close to that of the scalar case, and it does not need multiple samples per DWI.

[1]  J. Sijbers,et al.  Maximum likelihood estimation of signal amplitude and noise variance from MR data , 2004, Magnetic resonance in medicine.

[2]  Carl-Fredrik Westin,et al.  Signal LMMSE Estimation from Multiple Samples in MRI and DT-MRI , 2007, MICCAI.

[3]  Santiago Aja-FernRa,et al.  Image Quality Assessment based on Local Variance , 2006 .

[4]  Robert D. Nowak,et al.  Wavelet-based Rician noise removal for magnetic resonance imaging , 1999, IEEE Trans. Image Process..

[5]  Carl-Fredrik Westin,et al.  Restoration of DWI Data Using a Rician LMMSE Estimator , 2008, IEEE Transactions on Medical Imaging.

[6]  J. E. Tanner,et al.  Spin diffusion measurements : spin echoes in the presence of a time-dependent field gradient , 1965 .

[7]  Thomas L. Marzetta,et al.  EM algorithm for estimating the parameters of a multivariate complex Rician density for polarimetric SAR , 1995, 1995 International Conference on Acoustics, Speech, and Signal Processing.

[8]  Nicholas Ayache,et al.  Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I , 2007, MICCAI.

[9]  Eero P. Simoncelli,et al.  Image quality assessment: from error visibility to structural similarity , 2004, IEEE Transactions on Image Processing.

[10]  E. Bullmore,et al.  Formal characterization and extension of the linearized diffusion tensor model , 2005, Human brain mapping.

[11]  J Sijbers,et al.  Estimation of the noise in magnitude MR images. , 1998, Magnetic resonance imaging.

[12]  C. Westin,et al.  Sequential anisotropic Wiener filtering applied to 3D MRI data. , 2007, Magnetic resonance imaging.

[13]  M. Smith,et al.  An unbiased signal-to-noise ratio measure for magnetic resonance images. , 1993, Medical physics.