The small RNA profile during Drosophila melanogaster development.

[1]  T. Tuschl,et al.  Cloning of Small RNA Molecules , 2003, Current protocols in molecular biology.

[2]  M. Wassenegger.  Gene Silencing-Based Disease Resistance , 2002, Transgenic Research.

[3]  N. Perrimon,et al.  Coordinate regulation of small temporal RNAs at the onset of Drosophila metamorphosis. , 2003, Developmental biology.

[4]  V. Ambros,et al.  Temporal regulation of microRNA expression in Drosophila melanogaster mediated by hormonal signals and broad-Complex gene activity. , 2003, Developmental biology.

[5]  G. Rubin,et al.  Computational identification of Drosophila microRNA genes , 2003, Genome Biology.

[6]  Jürgen Brosius,et al.  RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs , 2003, Nucleic acids research.

[7]  V. Ambros,et al.  MicroRNAs and Other Tiny Endogenous RNAs in C. elegans , 2003, Current Biology.

[8]  Chiara Gamberi,et al.  The C elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target. , 2003, Developmental cell.

[9]  A. Rougvie,et al.  The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs. , 2003, Developmental cell.

[10]  G. Church,et al.  Computational and experimental identification of C. elegans microRNAs. , 2003, Molecular cell.

[11]  Bruce A. Hay,et al.  The Drosophila MicroRNA Mir-14 Suppresses Cell Death and Is Required for Normal Fat Metabolism , 2003, Current Biology.

[12]  C. Burge,et al.  The microRNAs of Caenorhabditis elegans. , 2003, Genes & development.

[13]  R. Russell,et al.  bantam Encodes a Developmentally Regulated microRNA that Controls Cell Proliferation and Regulates the Proapoptotic Gene hid in Drosophila , 2003, Cell.

[14]  Erez Y. Levanon,et al.  Widespread occurrence of antisense transcription in the human genome , 2003, Nature Biotechnology.

[15]  G. Hannon,et al.  RNAi: an ever-growing puzzle. , 2003, Trends in biochemical sciences.

[16]  A. Aravin,et al.  The GATE retrotransposon in Drosophila melanogaster: mobility in heterochromatin and aspects of its expression in germline tissues , 2003, Molecular Genetics and Genomics.

[17]  C. Burge,et al.  Vertebrate MicroRNA Genes , 2003, Science.

[18]  Christophe Antoniewski,et al.  Absence of transitive and systemic pathways allows cell-specific and isoform-specific RNAi in Drosophila. , 2003, RNA.

[19]  G. Ruvkun,et al.  A uniform system for microRNA annotation. , 2003, RNA.

[20]  Phillip A Sharp,et al.  siRNAs can function as miRNAs , 2003 .

[21]  P. Waterhouse,et al.  Posttranscriptional Gene Silencing Is Not Compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) Mutant, a Homolog of Dicer-1 from Drosophila , 2003, Current Biology.

[22]  G. Dreyfuss,et al.  Numerous microRNPs in neuronal cells containing novel microRNAs. , 2003, RNA.

[23]  T. Tuschl,et al.  New microRNAs from mouse and human. , 2003, RNA.

[24]  Xiaofeng Cao,et al.  ARGONAUTE4 Control of Locus-Specific siRNA Accumulation and DNA and Histone Methylation , 2003, Science.

[25]  B. Reinhart,et al.  A biochemical framework for RNA silencing in plants. , 2003, Genes & development.

[26]  M. Labouesse.  [Caenorhabditis elegans]. , 2003, Medecine sciences : M/S.

[27]  Gerald M Rubin,et al.  Heterochromatic sequences in a Drosophila whole-genome shotgun assembly , 2002, Genome Biology.

[28]  M. Ashburner,et al.  The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective , 2002, Genome Biology.

[29]  B. Samuelsson,et al.  Ribonuclease activity and RNA binding of recombinant human Dicer , 2002, The EMBO journal.

[30]  W. Filipowicz,et al.  Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP , 2002, The EMBO journal.

[31]  Animesh Ray,et al.  DICER-LIKE1: blind men and elephants in Arabidopsis development. , 2002, Trends in plant science.

[32]  Michael Q. Zhang,et al.  The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. , 2002, Genes & development.

[33]  B. Reinhart,et al.  A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[34]  A. Mushegian,et al.  Short Integuments1/suspensor1/carpel Factory, a Dicer Homolog, Is a Maternal Effect Gene Required for Embryo Development in Arabidopsis1 , 2002, Plant Physiology.

[35]  Olivier Voinnet,et al.  RNA silencing: small RNAs as ubiquitous regulators of gene expression. , 2002, Current opinion in plant biology.

[36]  C. Llave,et al.  Cleavage of Scarecrow-like mRNA Targets Directed by a Class of Arabidopsis miRNA , 2002, Science.

[37]  T. Fujisawa,et al.  Analysis of a piwi-Related Gene Implicates Small RNAs in Genome Rearrangement in Tetrahymena , 2002, Cell.

[38]  Sean D. Taverna,et al.  Methylation of Histone H3 at Lysine 9 Targets Programmed DNA Elimination in Tetrahymena , 2002, Cell.

[39]  B. Reinhart,et al.  Small RNAs Correspond to Centromere Heterochromatic Repeats , 2002, Science.

[40]  Henning Urlaub,et al.  Single-Stranded Antisense siRNAs Guide Target RNA Cleavage in RNAi , 2002, Cell.

[41]  Ira M. Hall,et al.  Establishment and Maintenance of a Heterochromatin Domain , 2002, Science.

[42]  J. Messing,et al.  CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in microRNA Metabolism in Arabidopsis thaliana , 2002, Current Biology.

[43]  V. Kim,et al.  MicroRNA maturation: stepwise processing and subcellular localization , 2002, The EMBO journal.

[44]  Olivier Voinnet,et al.  Two classes of short interfering RNA in RNA silencing , 2002, The EMBO journal.

[45]  M. Matzke,et al.  Short RNAs Can Identify New Candidate Transposable Element Families in Arabidopsis , 2002, Plant Physiology.

[46]  B. Reinhart,et al.  Prediction of Plant MicroRNA Targets , 2002, Cell.

[47]  Ira M. Hall,et al.  Regulation of Heterochromatic Silencing and Histone H3 Lysine-9 Methylation by RNAi , 2002, Science.

[48]  Jay Shendure,et al.  Computational discovery of sense-antisense transcription in the human and mouse genomes , 2002, Genome Biology.

[49]  Shinji Yamaguchi,et al.  RNAi is activated during Drosophila oocyte maturation in a manner dependent on aubergine and spindle-E. , 2002, Genes & development.

[50]  G. Hutvagner,et al.  A microRNA in a Multiple-Turnover RNAi Enzyme Complex , 2002, Science.

[51]  M. A. Rector,et al.  Endogenous and Silencing-Associated Small RNAs in Plants Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.003210. , 2002, The Plant Cell Online.

[52]  B. Reinhart,et al.  MicroRNAs in plants. , 2002, Genes & development.

[53]  Phillip D Zamore,et al.  Ancient Pathways Programmed by Small RNAs , 2002, Science.

[54]  Ronald H. A. Plasterk,et al.  RNA Silencing: The Genome's Immune System , 2002, Science.

[55]  S. Ding,et al.  Induction and Suppression of RNA Silencing by an Animal Virus , 2002, Science.

[56]  G. Rubin,et al.  ARGONAUTE1 is required for efficient RNA interference in Drosophila embryos , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[57]  T. Tuschl,et al.  Identification of Tissue-Specific MicroRNAs from Mouse , 2002, Current Biology.

[58]  E. Lai.  Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation , 2002, Nature Genetics.

[59]  M. Mann,et al.  miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. , 2002, Genes & development.

[60]  E. Moss,et al.  Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation. , 2002, Developmental biology.

[61]  E. Moss,et al.  MicroRNAs: Hidden in the Genome , 2002, Current Biology.

[62]  J. Birchler,et al.  RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila. , 2002, Molecular cell.

[63]  C. Mello,et al.  RNAi (Nematodes: Caenorhabditis elegans). , 2002, Advances in genetics.

[64]  A. Pasquinelli,et al.  Control of developmental timing by micrornas and their targets. , 2002, Annual review of cell and developmental biology.

[65]  P. Zamore,et al.  ATP Requirements and Small Interfering RNA Structure in the RNA Interference Pathway , 2001, Cell.

[66]  A. Djikeng,et al.  RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs. , 2001, RNA.

[67]  L. Lim,et al.  An Abundant Class of Tiny RNAs with Probable Regulatory Roles in Caenorhabditis elegans , 2001, Science.

[68]  T. Tuschl,et al.  Identification of Novel Genes Coding for Small Expressed RNAs , 2001, Science.

[69]  V. Ambros,et al.  An Extensive Class of Small RNAs in Caenorhabditis elegans , 2001, Science.

[70]  G. Hannon,et al.  C . elegans involved in developmental timing in Dicer functions in RNA interference and in synthesis of small RNA , 2001 .

[71]  J. Mattick,et al.  The evolution of controlled multitasked gene networks: the role of introns and other noncoding RNAs in the development of complex organisms. , 2001, Molecular biology and evolution.

[72]  A. Caudy,et al.  Argonaute2, a Link Between Genetic and Biochemical Analyses of RNAi , 2001, Science.

[73]  A. Fire,et al.  Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[74]  A. Pasquinelli,et al.  Genes and Mechanisms Related to RNA Interference Regulate Expression of the Small Temporal RNAs that Control C. elegans Developmental Timing , 2001, Cell.

[75]  A. Pasquinelli,et al.  A Cellular Function for the RNA-Interference Enzyme Dicer in the Maturation of the let-7 Small Temporal RNA , 2001, Science.

[76]  A. Aravin,et al.  Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline , 2001, Current Biology.

[77]  B. McKee,et al.  A role of the Drosophila homeless gene in repression of Stellate in male meiosis , 2001, Chromosoma.

[78]  Ming-Bo Wang,et al.  Gene silencing as an adaptive defence against viruses , 2001, Nature.

[79]  T. Tuschl,et al.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells , 2001, Nature.

[80]  A. Caudy,et al.  Role for a bidentate ribonuclease in the initiation step of RNA interference , 2001 .

[81]  T. Tuschl,et al.  RNA interference is mediated by 21- and 22-nucleotide RNAs. , 2001, Genes & development.

[82]  H. Cerutti,et al.  Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase. , 2000, Science.

[83]  B. Reinhart,et al.  Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA , 2000, Nature.

[84]  P. Sharp,et al.  RNAi Double-Stranded RNA Directs the ATP-Dependent Cleavage of mRNA at 21 to 23 Nucleotide Intervals , 2000, Cell.

[85]  S. Hammond,et al.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells , 2000, Nature.

[86]  B. Reinhart,et al.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans , 2000, Nature.

[87]  V. Ambros,et al.  The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. , 1999, Developmental biology.

[88]  R. Plasterk,et al.  mut-7 of C. elegans, Required for Transposon Silencing and RNA Interference, Is a Homolog of Werner Syndrome Helicase and RNaseD , 1999, Cell.

[89]  Andrew Fire,et al.  The rde-1 Gene, RNA Interference, and Transposon Silencing in C. elegans , 1999, Cell.

[90]  S. Pimpinelli,et al.  Genetic and molecular characterization of sting, a gene involved in crystal formation and meiotic drive in the male germ line of Drosophila melanogaster. , 1999, Genetics.

[91]  Karyn N. Johnson,et al.  The novel genome organization of the insect picorna-like virus Drosophila C virus suggests this virus belongs to a previously undescribed virus family. , 1998, The Journal of general virology.

[92]  W. Sullivan,et al.  The Drosophila grapes gene is related to checkpoint gene chk1/rad27 and is required for late syncytial division fidelity , 1997, Current Biology.

[93]  J. Ostrowski,et al.  Diverse molecular interactions of the hnRNP K protein , 1997, FEBS letters.

[94]  S. Bonaccorsi,et al.  Genetic analysis of Stellate elements of Drosophila melanogaster. , 1994, Genetics.

[95]  N. Dyson,et al.  DNA-binding and trans-activation properties of Drosophila E2F and DP proteins. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[96]  F. Bolivar,et al.  Antisense overlapping open reading frames in genes from bacteria to humans. , 1994, Nucleic acids research.

[97]  H. Leffers,et al.  Identification, molecular cloning, expression and chromosome mapping of a family of transformation upregulated hnRNP-K proteins derived by alternative splicing. , 1994, Journal of molecular biology.

[98]  G. Ruvkun,et al.  Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans , 1993, Cell.

[99]  V. Ambros,et al.  The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14 , 1993, Cell.

[100]  A. Hilliker,et al.  Mapping simple repeated DNA sequences in heterochromatin of Drosophila melanogaster. , 1993, Genetics.

[101]  K. Livak.  Detailed structure of the Drosophila melanogaster stellate genes and their transcripts. , 1990, Genetics.

[102]  John M. Hancock,et al.  Complete sequences of the rRNA genes of Drosophila melanogaster. , 1988, Molecular biology and evolution.

[103]  P. Chomczyński,et al.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. , 1987, Analytical biochemistry.

[104]  K. Livak.  Organization and mapping of a sequence on the Drosophila melanogaster X and Y chromosomes that is transcribed during spermatogenesis. , 1984, Genetics.

[105]  H. Lipkin.  Where is the ?c? , 1978 .

[106]  R. J. Benstead,et al.  Establishment and maintenance. , 1955 .