Global Diversity and Biogeography of Bacterial Communities in Wastewater Treatment 1 Plants 2 3
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M. Wagner | Jizhong Zhou | D. Stahl | Zhili He | L. Alvarez-Cohen | P. Alvarez | Yunfeng Yang | Tong Zhang | Aijie Wang | Ye Deng | Qiang He | C. Criddle | P. Nielsen | Bing-Chang Zhang | J. V. Nostrand | D. Ning | X. Wen | T. Curtis | G. Wells | J. Vierheilig | M. Brown | F. Ling | Keller | Ping Zhang | Tiedje | Linwei Wu | Xiaoyu Shan | Qiuting Zhang | Ya Zhang | Yong Li | Zhenxin Li | 5. Naijia | Xiao | 6. Qichao | Tu | 7. Jurg | 8. JamesM. | Fangqiong Ling
[1] Hélène Morlon,et al. Spatial patterns of phylogenetic diversity , 2011, Ecology letters.
[2] N. Fierer,et al. A global atlas of the dominant bacteria found in soil , 2018, Science.
[3] A. Klindworth,et al. Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies , 2012, Nucleic acids research.
[4] A. Konopka,et al. Quantifying community assembly processes and identifying features that impose them , 2013, The ISME Journal.
[5] Campbell O. Webb,et al. Picante: R tools for integrating phylogenies and ecology , 2010, Bioinform..
[6] Kai Xue,et al. Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform , 2017, PloS one.
[7] Barry Smith,et al. The environment ontology: contextualising biological and biomedical entities , 2013, Journal of Biomedical Semantics.
[8] Per Halkjær Nielsen,et al. MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups , 2017, Database J. Biol. Databases Curation.
[9] Ilkka Hanski,et al. Dynamics of regional distribution: the core and satellite species hypothesis , 1982 .
[10] Eric P. Nawrocki,et al. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea , 2011, The ISME Journal.
[11] Yves Rosseel,et al. lavaan: An R Package for Structural Equation Modeling , 2012 .
[12] Sadahiro Yamamoto,et al. Global, regional, and country level need for data on wastewater generation, treatment, and use , 2013 .
[13] R. Knight,et al. UniFrac: a New Phylogenetic Method for Comparing Microbial Communities , 2005, Applied and Environmental Microbiology.
[14] William A. Walters,et al. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample , 2010, Proceedings of the National Academy of Sciences.
[15] S. Langenheder,et al. The importance of species sorting differs between habitat generalists and specialists in bacterial communities. , 2014, FEMS microbiology ecology.
[16] Ye Deng,et al. Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis , 2015, BMC Microbiology.
[17] Jizhong Zhou,et al. Reproducibility and quantitation of amplicon sequencing-based detection , 2011, The ISME Journal.
[18] M. Wagner,et al. Complete nitrification by Nitrospira bacteria , 2015, Nature.
[19] P. Legendre,et al. MODELING BRAIN EVOLUTION FROM BEHAVIOR: A PERMUTATIONAL REGRESSION APPROACH , 1994, Evolution; international journal of organic evolution.
[20] Andy Liaw,et al. Classification and Regression by randomForest , 2007 .
[21] D. Faith. Conservation evaluation and phylogenetic diversity , 1992 .
[22] R. Blair. Good to the last drop. , 1983, The Canadian nurse.
[23] Emily S. Charlson,et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications , 2011, Nature Biotechnology.
[24] Steven W Kembel,et al. Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests. , 2009, Ecology letters.
[25] C. Huttenhower,et al. Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium , 2017, Nature Biotechnology.
[26] J. Salojärvi,et al. Discordant temporal development of bacterial phyla and the emergence of core in the fecal microbiota of young children , 2015, The ISME Journal.
[27] Jonathan M. Chase,et al. Using null models to disentangle variation in community dissimilarity from variation in α‐diversity , 2011 .
[28] E. Casamayor,et al. Ecology of the rare microbial biosphere of the Arctic Ocean , 2009, Proceedings of the National Academy of Sciences.
[29] Robert C. Edgar,et al. UPARSE: highly accurate OTU sequences from microbial amplicon reads , 2013, Nature Methods.
[30] Pelin Yilmaz,et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools , 2012, Nucleic Acids Res..
[31] P Foladori,et al. Direct quantification of bacterial biomass in influent, effluent and activated sludge of wastewater treatment plants by using flow cytometry. , 2010, Water research.
[32] Kenneth A. Bollen,et al. Representing general theoretical concepts in structural equation models: the role of composite variables , 2008, Environmental and Ecological Statistics.
[33] Ow,et al. The Sources and Solutions: Wastewater , 2013 .
[34] Paramvir S. Dehal,et al. FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments , 2010, PloS one.
[35] Robert C. Edgar,et al. BIOINFORMATICS APPLICATIONS NOTE , 2001 .
[36] D. Higgins,et al. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega , 2011, Molecular systems biology.
[37] J. Tiedje,et al. Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy , 2007, Applied and Environmental Microbiology.
[38] Tong Zhang,et al. Bacterial assembly and temporal dynamics in activated sludge of a full-scale municipal wastewater treatment plant , 2014, The ISME Journal.
[39] Jizhong Zhou,et al. Random Sampling Process Leads to Overestimation of β-Diversity of Microbial Communities , 2013, mBio.
[40] Jizhong Zhou,et al. Climate warming leads to divergent succession of grassland microbial communities , 2018, Nature Climate Change.