Analyses of mitochondrial genes reveal two sympatric but genetically divergent lineages of Rhipicephalus appendiculatus in Kenya

[1]  O. Hanotte,et al.  Multi-locus genotyping reveals absence of genetic structure in field populations of the brown ear tick (Rhipicephalus appendiculatus) in Kenya. , 2016, Ticks and tick-borne diseases.

[2]  M. Kuntner,et al.  DNA barcoding gap: reliable species identification over morphological and geographical scales , 2015, Molecular ecology resources.

[3]  Yoshihiro Yamamoto,et al.  DNA barcoding reveals 24 distinct lineages as cryptic bird species candidates in and around the Japanese Archipelago , 2015, Molecular ecology resources.

[4]  R. Shao,et al.  Accepted manuscript , 2019 .

[5]  Koichiro Tamura,et al.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.

[6]  C. Matthee,et al.  The Influence of Interspecific Competition and Host Preference on the Phylogeography of Two African Ixodid Tick Species , 2013, PloS one.

[7]  D. Otranto,et al.  Morphological and genetic diversity of Rhipicephalus sanguineus sensu lato from the New and Old Worlds , 2013, Parasites & Vectors.

[8]  R. Shao,et al.  Phylogenetic analysis of the mitochondrial genomes and nuclear rRNA genes of ticks reveals a deep phylogenetic structure within the genus Haemaphysalis and further elucidates the polyphyly of the genus Amblyomma with respect to Amblyomma sphenodonti and Amblyomma elaphense. , 2013, Ticks and Tick-borne Diseases.

[9]  N. Baeshen,et al.  Biological Identifications Through DNA Barcodes , 2012 .

[10]  O. Hanotte,et al.  Micro- and minisatellite-expressed sequence tag (EST) markers discriminate between populations of Rhipicephalus appendiculatus. , 2012, Ticks and tick-borne diseases.

[11]  A. Baker,et al.  DNA Barcode Detects High Genetic Structure within Neotropical Bird Species , 2011, PloS one.

[12]  P. Hebert,et al.  Neotropical Bats: Estimating Species Diversity with DNA Barcodes , 2011, PloS one.

[13]  R. Shao,et al.  Phylogenetic and phylogeographic relationships in Ixodes holocyclus and Ixodes cornuatus (Acari: Ixodidae) inferred from COX1 and ITS2 sequences. , 2011, International journal for parasitology.

[14]  J. Beadell,et al.  Phylogeography and Taxonomy of Trypanosoma brucei , 2011, PLoS neglected tropical diseases.

[15]  D. Steinke,et al.  DNA barcoding of marine metazoa. , 2011, Annual review of marine science.

[16]  David J. Lohman,et al.  Cryptic genetic diversity in "widespread" Southeast Asian bird species suggests that Philippine avian endemism is gravely underestimated. , 2010 .

[17]  L. Excoffier,et al.  Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows , 2010, Molecular ecology resources.

[18]  D. Knowles,et al.  Quantification of Theileria parva in Rhipicephalus appendiculatus (Acari: Ixodidae) Confirms Differences in Infection Between Selected Tick Strains , 2009, Journal of medical entomology.

[19]  Pablo Librado,et al.  DnaSP v5: a software for comprehensive analysis of DNA polymorphism data , 2009, Bioinform..

[20]  G. Di Giulio,et al.  Live immunization against East Coast fever--current status. , 2009, Trends in parasitology.

[21]  D. Berkvens,et al.  Genetic variation in Rhipicephalus appendiculatus (Acari: sIxodidae) from Zambia: correlating genetic and ecological variation with Rhipicephalus appendiculatus from eastern and southern Africa , 2007, Journal of vector ecology : journal of the Society for Vector Ecology.

[22]  D. Berkvens,et al.  Further evidence for geographic differentiation in R. appendiculatus (Acari: Ixodidae) from Eastern and Southern provinces of Zambia , 2007, Experimental and Applied Acarology.

[23]  R. Poulin,et al.  The scaling of total parasite biomass with host body mass. , 2007, International journal for parasitology.

[24]  Sudhindra R Gadagkar,et al.  Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree. , 2005, Journal of experimental zoology. Part B, Molecular and developmental evolution.

[25]  N. Speybroeck,et al.  Variation in body size in the tick complex Rhipicephalus appendiculatus/Rhipicephalus zambeziensis. , 2004, Journal of vector ecology : journal of the Society for Vector Ecology.

[26]  F. Jongejan,et al.  The global importance of ticks , 2004, Parasitology.

[27]  P. Hebert,et al.  Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species , 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[28]  Y. Michalakis,et al.  HOST‐DEPENDENT GENETIC STRUCTURE OF PARASITE POPULATIONS: DIFFERENTIAL DISPERSAL OF SEABIRD TICK HOST RACES , 2003, Evolution; international journal of organic evolution.

[29]  S. Barker,et al.  Recurrent gains and losses of large (84–109 bp) repeats in the rDNA internal transcribed spacer 2 (ITS2) of rhipicephaline ticks , 2001, Insect molecular biology.

[30]  S. Barker,et al.  Microsatellite Loci of the Cattle Tick Boophilus Microplus (Acari: Ixodidae) , 2000, Experimental & Applied Acarology.

[31]  S. Barker,et al.  Phylogenetic analyses of the rhipicephaline ticks indicate that the genus Rhipicephalus is paraphyletic. , 2000, Molecular phylogenetics and evolution.

[32]  H. Klompen The Genus Rhipicephalus (Acari, Ixodidae). A Guide to the Brown Ticks of the World, , 2000 .

[33]  N. Speybroeck,et al.  Diapause induction in adults of three Rhipicephalus appendiculatus stocks , 1999, Experimental & Applied Acarology.

[34]  F. Sperling,et al.  Mitochondrial DNA sequence variation in Ixodes pacificus (Acari: Ixodidae) , 1999, Heredity.

[35]  S. Barker Distinguishing species and populations of rhipicephaline ticks with its 2 ribosomal RNA. , 1998, The Journal of parasitology.

[36]  G. Medley,et al.  Vector competence of 7 rhipicephalid tick stocks in transmitting 2 Theileria parva parasite stocks from Kenya and Zimbabwe , 1998, Parasitology.

[37]  Y. Fu,et al.  Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. , 1997, Genetics.

[38]  Todd H. Oakley,et al.  Phylogenetic analysis of Pacific salmon (genus Oncorhynchus) using nuclear and mitochondrial DNA sequences , 1997 .

[39]  S. Randolph Abiotic and biotic determinants of the seasonal dynamics of the tick Rhipicephalus appendiculatus in South Africa , 1997, Medical and veterinary entomology.

[40]  F. Tajima The amount of DNA polymorphism maintained in a finite population when the neutral mutation rate varies among sites. , 1996, Genetics.

[41]  A. Rogers GENETIC EVIDENCE FOR A PLEISTOCENE POPULATION EXPLOSION , 1995, Evolution; international journal of organic evolution.

[42]  H. Ochanda,et al.  Estimation of heritability of susceptibility to infection with Theileria parva in the tick Rhipicephalus appendiculatus , 1995, Parasitology.

[43]  B. Crespi,et al.  Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers , 1994 .

[44]  R. Vrijenhoek,et al.  DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. , 1994, Molecular marine biology and biotechnology.

[45]  H. Harpending,et al.  Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. , 1994, Human biology.

[46]  G. Gettinby The epidemiology of theileriosis in Africa , 1993 .

[47]  K. Tamura,et al.  Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases. , 1992, Molecular biology and evolution.

[48]  H. Harpending,et al.  Population growth makes waves in the distribution of pairwise genetic differences. , 1992, Molecular biology and evolution.

[49]  R. Kruska,et al.  Climate, vegetation and the distribution of Rhipicephalus appendiculatus in Africa. , 1990, Parasitology today.

[50]  F. Tajima Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. , 1989, Genetics.

[51]  D. Brooks,et al.  Evolutionary biology of parasites. , 1981, Monographs in population biology.

[52]  N. Speybroeck,et al.  Geographic variation in diapause response of adult Rhipicephalus appendiculatus ticks , 2004, Experimental & Applied Acarology.

[53]  G. Rowlands,et al.  Population dynamics of ticks on indigenous cattle in a pastoral dry to semi-arid rangeland zone of Uganda , 2004, Experimental & Applied Acarology.

[54]  A. Estrada-Peña,et al.  Ticks of domestic animals in Africa: a guide to identification of species , 2003 .

[55]  B. Minjauw,et al.  Tick-borne diseases and poverty. The impact of ticks and tick- borne diseases on the livelihood of small-scale and marginal livestock owners in India and eastern and southern Africa. Research report, DFID Animal Health Programme , 2003 .

[56]  A. Mcleod,et al.  Tick-borne diseases and poverty. The impact of ticks and tickborne diseases on the livelihood of small-scale and marginal livestock owners in India and eastern and southern Africa. , 2003 .

[57]  S. Randolph Ticks and tick-borne disease systems in space and from space. , 2000, Advances in parasitology.

[58]  H. Bandelt,et al.  Median-joining networks for inferring intraspecific phylogenies. , 1999, Molecular biology and evolution.

[59]  M. Shaw,et al.  The Biology of Theileria Species in Ixodid Ticks in Relation to Parasite Transmission , 1994 .

[60]  D. Radley Infection and Treatment Method of Immunization Against Theileriosis , 1981 .

[61]  K. P. Bailey,et al.  Noteson the rearing of Rhipicephalus aippendiculatus and their infection with Theileria parva for experimental transmission. , 1960 .

[62]  H. Hoogstraal African Ixodoidea. VoI. I. Ticks of the Sudan (with special reference to Equatoria Province and with Preliminary Reviews of the Genera Boophilus, Margaropus, and Hyalomma). , 1956 .