In situ 2D fluorometry and chemometric monitoring of mammalian cell cultures

The main objective of the present study was to investigate the use of in situ 2D fluorometry for monitoring key bioprocess variables in mammalian cell cultures, namely the concentration of viable cells and the concentration of recombinant proteins. All studies were conducted using a recombinant Baby Hamster Kidney (BHK) cell line expressing a fusion glycoprotein IgG1‐IL2 cultured in batch and fed‐batch modes. It was observed that the intensity of fluorescence signals in the excitation/emission wavelength range of amino acids, vitamins and NAD(P)H changed along culture time, although the dynamics of single fluorophors could not be correlated with the dynamics of the target state variables. Therefore, multivariate chemometric modeling was adopted as a calibration methodology. 2D fluorometry produced large volumes of redundant spectral data, which were first filtered by principal components analysis (PCA). Then, a partial least squares (PLS) regression was applied to correlate the reduced fluorescence maps with the target state variables. Two validation strategies were used to evaluate the predictive capacity of the developed PLS models. Accurate estimations of viable cells density (r2 = 0.95; 99.2% of variance captured in the training set; r2 = 0.91; 97.7% of variance captured in the validation set) and of glycoprotein concentration (r2 = 0.99 and 99.7% of variance captured in the training set; r2 = 0.99 and 99.3% of variance captured in the validation set) were obtained over a wide range of reactor operation conditions. The results presented herein confirm that 2D fluorometry constitutes a reliable methodology for on‐line monitoring of viable cells and recombinant protein concentrations in mammalian cell cultures. Biotechnol. Bioeng. 2009;102: 1098–1106. © 2008 Wiley Periodicals, Inc.

[1]  Ana P. Teixeira,et al.  Modelling and optimization of a recombinant BHK-21 cultivation process using hybrid grey-box systems. , 2005, Journal of biotechnology.

[2]  Dörte Solle,et al.  Chemometric modelling with two-dimensional fluorescence data for Claviceps purpurea bioprocess characterization. , 2003, Journal of biotechnology.

[3]  E. Skibsted,et al.  On-line bioprocess monitoring with a multi-wavelength fluorescence sensor using multivariate calibration. , 2001, Journal of biotechnology.

[4]  Mario Jolicoeur,et al.  Plant Cell Culture Monitoring Using an in Situ Multiwavelength Fluorescence Probe , 2008, Biotechnology progress.

[5]  Paul Geladi,et al.  Principal Component Analysis , 1987, Comprehensive Chemometrics.

[6]  S. Vera,et al.  Determination of thiamine, riboflavin and pyridoxine in pharmaceuticals by synchronous fluorescence spectrometry in organized media , 2001 .

[7]  J J Horvath,et al.  In Situ Fluorescence Cell Mass Measurements of Saccharomyces cerevisiae Using Cellular Tryptophan , 1993, Biotechnology progress.

[8]  Carsten Lindemann,et al.  2-Dimensional fluorescence spectroscopy for on-line bioprocess monitoring , 1998 .

[9]  Mario Jolicoeur,et al.  A multiwavelength fluorescence probe: is one probe capable for on-line monitoring of recombinant protein production and biomass activity? , 2005, Journal of Biotechnology.

[10]  L. Olsson,et al.  Chemometric analysis of in‐line multi‐wavelength fluorescence measurements obtained during cultivations with a lipase producing Aspergillus oryzae strain , 2007, Biotechnology and bioengineering.

[11]  Gary Walsh,et al.  Biopharmaceutical benchmarks 2006 , 2006, Nature Biotechnology.

[12]  Dae Sung Lee,et al.  Nonlinear dynamic partial least squares modeling of a full-scale biological wastewater treatment plant , 2006 .

[13]  A E Humphrey,et al.  Monitoring Cell Concentration and Activity by Multiple Excitation Fluorometry , 1991, Biotechnology progress.

[14]  Lisbeth Olsson,et al.  Determination of cell mass and polymyxin using multi-wavelength fluorescence. , 2006, Journal of biotechnology.

[15]  Roland Ulber,et al.  Optical sensor systems for bioprocess monitoring , 2003, Analytical and bioanalytical chemistry.

[16]  Hector Budman,et al.  Evaluation of spectrofluorometry as a tool for estimation in fed-batch fermentations. , 2003, Biotechnology and bioengineering.

[17]  J S Almeida,et al.  Two-dimensional fluorometry coupled with artificial neural networks: a novel method for on-line monitoring of complex biological processes. , 2001, Biotechnology and bioengineering.

[18]  Bernd Hitzmann,et al.  State variables monitoring by in situ multi-wavelength fluorescence spectroscopy in heterologous protein production by Pichia pastoris. , 2006, Journal of biotechnology.

[19]  Arthur E. Humphrey,et al.  Factors Affecting Culture Fluorescence When Monitoring Bioreactors , 1992 .

[20]  João G Crespo,et al.  An improved method for two-dimensional fluorescence monitoring of complex bioreactors. , 2007, Journal of biotechnology.

[21]  A. Humphrey,et al.  Use of fluorometry for monitoring and control of a bioreactor , 1991, Biotechnology and bioengineering.

[22]  Yong-Sik Yim,et al.  Application of artificial neural networks to the analysis of two-dimensional fluorescence spectra in recombinant E coli fermentation processes , 2005 .

[23]  José Manuel Amigo,et al.  Parallel factor analysis combined with PLS regression applied to the on-line monitoring of Pichia pastoris cultures , 2006, Analytical and bioanalytical chemistry.

[24]  Francisco Valero,et al.  Biomass estimation using fluorescence measurements in Pichia pastoris bioprocess , 2006 .

[25]  J. B. Griffiths,et al.  An integrated strategy for the process development of a recombinant antibody-cytokine fusion protein expressed in BHK cells , 1999, Applied Microbiology and Biotechnology.

[26]  Jong Il Rhee,et al.  On-line process monitoring and chemometric modeling with 2D fluorescence spectra obtained in recombinant E. coli fermentations , 2007 .

[27]  B Tartakovsky,et al.  Application of Scanning Fluorometry for Monitoring of a Fermentation Process , 1996, Biotechnology progress.

[28]  B. Kowalski,et al.  Partial least-squares regression: a tutorial , 1986 .

[29]  Thomas Scheper,et al.  Two‐Dimensional Fluorescence Spectroscopy: A New Tool for On‐Line Bioprocess Monitoring , 1998, Biotechnology progress.