Gramene database: a hub for comparative plant genomics.
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[1] Y. Yamazaki,et al. Oryzabase. An Integrated Biological and Genome Information Database for Rice1[OA] , 2005, Plant Physiology.
[2] Jennifer W. Weller,et al. The Medicago Genome Initiative: a model legume database , 2001, Nucleic Acids Res..
[3] Mihaela M. Martis,et al. The Sorghum bicolor genome and the diversification of grasses , 2009, Nature.
[4] Lincoln Stein,et al. Gramene: a growing plant comparative genomics resource , 2007, Nucleic Acids Res..
[5] S. Searle,et al. The Ensembl analysis pipeline. , 2004, Genome research.
[6] Brian Smith-White,et al. Plant Genome Resources at the National Center for Biotechnology Information , 2005, Plant Physiology.
[7] L. Stein,et al. Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology1[OA] , 2006, Plant Physiology.
[8] C. Soderlund,et al. The Oryza Map Alignment Project: The Golden Path to Unlocking the Genetic Potential of Wild Rice Species , 2005, Plant Molecular Biology.
[9] L. Stein,et al. Gramene: Development and Integration of Trait and Gene Ontologies for Rice , 2002, Comparative and functional genomics.
[10] Liya Ren,et al. Gramene QTL database: development, content and applications , 2009, Database J. Biol. Databases Curation.
[11] Elizabeth M. Smigielski,et al. dbSNP: the NCBI database of genetic variation , 2001, Nucleic Acids Res..
[12] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[13] L. Lipovich,et al. Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential. , 2001, Genome research.
[14] B. Keller,et al. Colinearity and gene density in grass genomes. , 2000, Trends in plant science.
[15] R. Tarchini,et al. The Complete Sequence of 340 kb of DNA around the Rice Adh1–Adh2 Region Reveals Interrupted Colinearity with Maize Chromosome 4 , 2000, Plant Cell.
[16] C. Town. Annotating the genome of Medicago truncatula. , 2006, Current opinion in plant biology.
[17] L. Stein,et al. The Plant Structure Ontology, a Unified Vocabulary of Anatomy and Morphology of a Flowering Plant1[W][OA] , 2006, Plant Physiology.
[18] Huanming Yang,et al. A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) , 2002, Science.
[19] Wei Zhao,et al. Gramene: a bird's eye view of cereal genomes , 2005, Nucleic Acids Res..
[20] Wei Zhu,et al. The Institute for Genomic Research Osa1 Rice Genome Annotation Database1 , 2005, Plant Physiology.
[21] Takuji Sasaki,et al. The map-based sequence of the rice genome , 2005, Nature.
[22] W. J. Kent,et al. BLAT--the BLAST-like alignment tool. , 2002, Genome research.
[23] Qunfeng Dong,et al. PlantGDB, plant genome database and analysis tools , 2004, Nucleic Acids Res..
[24] Lincoln Stein,et al. Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support , 2006, Bioinform..
[25] W. Richard McCombie,et al. Sorghum Genome Sequencing by Methylation Filtration , 2005, PLoS biology.
[26] Xiaohong Wang,et al. Databases and Information Integration for the Medicago truncatula Genome and Transcriptome1 , 2005, Plant Physiology.
[27] B Marshall,et al. Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource , 2004, Nucleic Acids Res..
[28] M. Gribskov,et al. The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) , 2006, Science.
[29] Pankaj Jaiswal,et al. Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase. , 2005, Plant & cell physiology.
[30] Cathy H. Wu,et al. UniProt: the Universal Protein knowledgebase , 2004, Nucleic Acids Res..
[31] Dorrie Main,et al. GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data , 2007, Nucleic Acids Res..
[32] Jian Wang,et al. BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics , 2004, Nucleic Acids Res..
[33] Gregory D. Schuler,et al. Database resources of the National Center for Biotechnology Information: update , 2004, Nucleic acids research.
[34] John Quackenbush,et al. The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes , 2004, Nucleic Acids Res..
[35] Ju-Kyung Yu,et al. Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley , 2005, BMC Genomics.
[36] L. Stein,et al. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). , 2002, DNA research : an international journal for rapid publication of reports on genes and genomes.
[37] L. Stein,et al. Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages , 2005, Comparative and functional genomics.