Impact of bacterial biofilms: the importance of quantitative biofilm studies

The impact of various parameters, such as nutrient, temperature, surface materials and condition and hydrodynamics, on biofilm formation is well studied. Extensive research has focused on the relationship between these parameters and bacterial biofilms, with the aim of gaining an understanding of biofilm behaviour under different growth conditions so that relevant control strategies can be implemented. In such studies, model simulations have been used to qualitative study the behaviour of the biofilms respond to change in parameters. However, little is known about the quantitative study of biofilm behaviour in response to change in these parameters. In previous studies, it was indicated that nutrient concentrations influence biofilm morphology (biomass, structures and thickness) but the concentration levels at which biofilm change in structure and thickness is not mentioned. These observations were based on determining biofilms structure without considering the biomass. Findings that are based on qualitative studies only may be insufficient and not in supportive due to the fact that may be pose many speculations and debates. The biomass, structures and thickness form biofilm morphology, therefore if one part is affected, the other parts may also be affected. It is important to conduct research that will focus on both qualitative and qualitative analysis on the impact of parameters on biofilm formation and growth. The aim of this review is to highlight the importance of conducting parallel research on quantitative and qualitative study on microbial biofilms with respect to biomass, structure and thickness.

[1]  A. Camper,et al.  Effect of growth conditions and substratum composition on the persistence of coliforms in mixed-population biofilms , 1996, Applied and environmental microbiology.

[2]  Roger E. Bumgarner,et al.  Gene expression in Pseudomonas aeruginosa biofilms , 2001, Nature.

[3]  Hans-Curt Flemming,et al.  The EPS Matrix: The “House of Biofilm Cells” , 2007, Journal of bacteriology.

[4]  D. Allison,et al.  The Biofilm Matrix , 2003, Biofouling.

[5]  Tong Zhang,et al.  Quantification of extracellular polymeric substances in biofilms by confocal laser scanning microscopy , 2001, Biotechnology Letters.

[6]  T. Rao Comparative effect of temperature on biofilm formation in natural and modified marine environment , 2010, Aquatic Ecology.

[7]  Hong Liu,et al.  Extraction of extracellular polymeric substances (EPS) of sludges. , 2002, Journal of biotechnology.

[8]  G. Di Bonaventura,et al.  Influence of temperature on biofilm formation by Listeria monocytogenes on various food‐contact surfaces: relationship with motility and cell surface hydrophobicity , 2008, Journal of applied microbiology.

[9]  T. E. Cloete,et al.  Protease and amylase enzymes for biofilm removal and degradation of extracellular polymeric substances (EPS) produced by Pseudomonas fluorescens bacteria , 2010 .

[10]  A. Wennerberg,et al.  Surface characteristics and in vitro biofilm formation on glass ionomer and composite resin. , 2001, Biomaterials.

[11]  J. Lebeault,et al.  Effects of nutrients on biofilm formation and detachment of a Pseudomonas putida strain isolated from a paper machine. , 2007, Water research.

[12]  A. Hirsch,et al.  Effects of nutritional and environmental conditions on Sinorhizobium meliloti biofilm formation. , 2006, Research in microbiology.

[13]  A. Camper,et al.  Characterization of Phenotypic Changes inPseudomonas putida in Response to Surface-Associated Growth , 2001, Journal of bacteriology.

[14]  E. Ivanova,et al.  Bacterial Extracellular Polysaccharides Involved in Biofilm Formation , 2009, Molecules.

[15]  T. Burr,et al.  Type I and type IV pili of Xylella fastidiosa affect twitching motility, biofilm formation and cell-cell aggregation. , 2007, Microbiology.

[16]  W. Dunne,et al.  Bacterial Adhesion: Seen Any Good Biofilms Lately? , 2002, Clinical Microbiology Reviews.

[17]  D C Coleman,et al.  The role of manufacturers in reducing biofilms in dental chair waterlines. , 2007, Journal of dentistry.

[18]  P Stoodley,et al.  Influence of hydrodynamics and nutrients on biofilm structure , 1998, Journal of applied microbiology.

[19]  J. Kristl,et al.  The control of biofilm formation by hydrodynamics of purified water in industrial distribution system. , 2011, International journal of pharmaceutics.

[20]  Anthony W Smith,et al.  Biofilms and antibiotic therapy: is there a role for combating bacterial resistance by the use of novel drug delivery systems? , 2005, Advanced drug delivery reviews.

[21]  N. Bhosle,et al.  Microbial extracellular polymeric substances in marine biogeochemical processes , 2005 .

[22]  P Stoodley,et al.  The influence of fluid shear on the structure and material properties of sulphate-reducing bacterial biofilms , 2002, Journal of Industrial Microbiology and Biotechnology.

[23]  P. Stewart,et al.  Hindering biofilm formation with zosteric acid , 2010, Biofouling.

[24]  S. Rice,et al.  Biofilm Formation and Sloughing in Serratia marcescens Are Controlled by Quorum Sensing and Nutrient Cues , 2005, Journal of bacteriology.

[25]  Q. Zheng,et al.  Effect of Shear Stress on Biofilm Morphological Characteristics and the Secretion of Extracellular Polymeric Substances , 2008, 2008 2nd International Conference on Bioinformatics and Biomedical Engineering.

[26]  Joseph F. Frank,et al.  Biofilm Formation and Control in Food Processing Facilities. , 2003, Comprehensive reviews in food science and food safety.

[27]  Cory J. Rupp,et al.  Biofilm material properties as related to shear-induced deformation and detachment phenomena , 2002, Journal of Industrial Microbiology and Biotechnology.

[28]  M. O. Pereira,et al.  The effect of hydrodynamic conditions on the phenotype of Pseudomonas fluorescens biofilms , 2007, Biofouling.

[29]  Luís F. Melo,et al.  Biofilm formation: hydrodynamic effects on internal diffusion and structure , 1993 .

[30]  M. Spérandio,et al.  Protein extraction from activated sludge: an analytical approach. , 2008, Water research.

[31]  S. Banerjee,et al.  Adsorption, attachment and biofilm formation among isolates of Listeria monocytogenes using model conditions , 2001, Journal of applied microbiology.

[32]  Cristian Picioreanu,et al.  Biofilm modeling: present status and future directions , 1999 .

[33]  Sungsu Park,et al.  Biofilm formation and local electrostatic force characteristics of Escherichia coli O157:H7 observed by electrostatic force microscopy , 2007 .

[34]  I. Sutherland,et al.  Structure-function relationships in microbial exopolysaccharides. , 1994, Biotechnology advances.

[35]  R. Kolter,et al.  Biofilm formation as microbial development. , 2000, Annual review of microbiology.

[36]  Joachim Klahre,et al.  Monitoring of biofouling in papermill process waters , 2000 .

[37]  Xi Chen,et al.  A comparison of five extraction methods for extracellular polymeric substances (EPS) from biofilm by using three-dimensional excitation-emission matrix (3DEEM) fluorescence spectroscopy , 2010 .

[38]  J. Tay,et al.  The influence of cell and substratum surface hydrophobicities on microbial attachment. , 2004, Journal of biotechnology.

[39]  M. Vieira,et al.  A review of current and emergent biofilm control strategies , 2010 .

[40]  Thierry Benezech,et al.  Adhesion of Bacillus spores and Escherichia coli cells to inert surfaces: role of surface hydrophobicity. , 2002, Canadian journal of microbiology.

[41]  R. Dickinson,et al.  Mechanisms of Bacterial Adhesion and Pathogenesis of Implant and Tissue Infections , 2000 .

[42]  T. E. Cloete,et al.  Dynamic response of biofilm to pipe surface and fluid velocity. , 2003, Water science and technology : a journal of the International Association on Water Pollution Research.

[43]  J. Costerton,et al.  Pseudomonas aeruginosa biofilm as a diffusion barrier to piperacillin , 1992, Antimicrobial Agents and Chemotherapy.

[44]  M. Dignac,et al.  CHEMICAL DESCRIPTION ON EXTRACELLULAR POLYMERS: IMPLICATIONON ACTIVATED SLUDGE FLOC STRUCTURE , 1998 .

[45]  Yuehuei H. An,et al.  Handbook of Bacterial adhesion : principles, methods, and applications , 2000 .

[46]  B. M. Veeregowda,et al.  Biofilms: A survival strategy of bacteria , 2003 .

[47]  M. Ras,et al.  Extracellular Polymeric Substances diversity of biofilms grown under contrasted environmental conditions. , 2011, Water research.

[48]  J. Costerton,et al.  Influence of Hydrodynamics and Cell Signaling on the Structure and Behavior of Pseudomonas aeruginosa Biofilms , 2002, Applied and Environmental Microbiology.

[49]  Korin E. Wheeler,et al.  Characterization of Extracellular Polymeric Substances from Acidophilic Microbial Biofilms , 2010, Applied and Environmental Microbiology.

[50]  W. Cai,et al.  A comparative study on biofilm formation of non- typeable Haemophilus influenzae and Pseudomonas aeruginosa under single culture or co-culture , 2010 .

[51]  Paul Stoodley,et al.  The effect of the chemical, biological, and physical environment on quorum sensing in structured microbial communities , 2006, Analytical and bioanalytical chemistry.

[52]  A. Gutierrez,et al.  Effect of surface materials on initial biofilm development , 1998 .

[53]  Jost Wingender,et al.  Community structure and co-operation in biofilms: Cohesiveness in biofilm matrix polymers , 2000 .

[54]  J. Costerton Overview of microbial biofilms , 1995, Journal of Industrial Microbiology.

[55]  Shaoyi Jiang,et al.  Inhibition of bacterial adhesion and biofilm formation on zwitterionic surfaces. , 2007, Biomaterials.

[56]  Tong Zhang,et al.  Characterization of a hydrogen-producing granular sludge. , 2002, Biotechnology and bioengineering.

[57]  B. Ratner,et al.  Bioinspired implant materials befuddle bacteria , 2004 .

[58]  R. M. Donlan,et al.  Biofilms and device-associated infections. , 2001, Emerging infectious diseases.

[59]  F. Besenbacher,et al.  Antifouling enzymes and the biochemistry of marine settlement. , 2008, Biotechnology advances.

[60]  P. Martikainen,et al.  Bacterial biofilm formation on polyvinyl chloride, polyethylene and stainless steel exposed to ozonated water , 2000 .