Evaluation of Pattern Recognition and Feature Extraction Methods in ADHD Prediction

Attention Deficit/Hyperactivity Disorder (ADHD) is a neurodevelopmental disorder, being one of the most prevalent psychiatric disorders in childhood. The neural substrates associated with this condition, both from structural and functional perspectives, are not yet well established. Recent studies have highlighted the relevance of neuroimaging not only to provide a more solid understanding about the disorder but also for possible clinical support. The ADHD-200 Consortium organized the ADHD-200 global competition making publicly available, hundreds of structural magnetic resonance imaging (MRI) and functional MRI (fMRI) datasets of both ADHD patients and typically developing (TD) controls for research use. In the current study, we evaluate the predictive power of a set of three different feature extraction methods and 10 different pattern recognition methods. The features tested were regional homogeneity (ReHo), amplitude of low frequency fluctuations (ALFF), and independent components analysis maps (resting state networks; RSN). Our findings suggest that the combination ALFF+ReHo maps contain relevant information to discriminate ADHD patients from TD controls, but with limited accuracy. All classifiers provided almost the same performance in this case. In addition, the combination ALFF+ReHo+RSN was relevant in combined vs. inattentive ADHD classification, achieving a score accuracy of 67%. In this latter case, the performances of the classifiers were not equivalent and L2-regularized logistic regression (both in primal and dual space) provided the most accurate predictions. The analysis of brain regions containing most discriminative information suggested that in both classifications (ADHD vs. TD controls and combined vs. inattentive), the relevant information is not confined only to a small set of regions but it is spatially distributed across the whole brain.

[1]  Janet B W Williams,et al.  Diagnostic and Statistical Manual of Mental Disorders , 2013 .

[2]  R Cameron Craddock,et al.  A whole brain fMRI atlas generated via spatially constrained spectral clustering , 2012, Human brain mapping.

[3]  Mark A. Elliott,et al.  Impact of in-scanner head motion on multiple measures of functional connectivity: Relevance for studies of neurodevelopment in youth , 2012, NeuroImage.

[4]  Jonathan D. Power,et al.  Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion , 2012, NeuroImage.

[5]  Chunshui Yu,et al.  Resting-State Brain Activity in Adult Males Who Stutter , 2012, PloS one.

[6]  Xi Zhang,et al.  Altered spontaneous activity in Alzheimer's disease and mild cognitive impairment revealed by Regional Homogeneity , 2012, NeuroImage.

[7]  Mert R. Sabuncu,et al.  The influence of head motion on intrinsic functional connectivity MRI , 2012, NeuroImage.

[8]  Danny J. J. Wang,et al.  Loss of Coherence of Low Frequency Fluctuations of BOLD FMRI in Visual Cortex of Healthy Aged Subjects , 2011, The open neuroimaging journal.

[9]  Huafu Chen,et al.  Regional homogeneity changes in social anxiety disorder: A resting-state fMRI study , 2011, Psychiatry Research: Neuroimaging.

[10]  E. Walker,et al.  Diagnostic and Statistical Manual of Mental Disorders , 2013 .

[11]  Carlos E. Thomaz,et al.  Please Scroll down for Article Social Neuroscience Identification of Psychopathic Individuals Using Pattern Classification of Mri Images Identification of Psychopathic Individuals Using Pattern Classification of Mri Images , 2022 .

[12]  Ying Han,et al.  Frequency-dependent changes in the amplitude of low-frequency fluctuations in amnestic mild cognitive impairment: A resting-state fMRI study , 2011, NeuroImage.

[13]  Deepti R. Bathula,et al.  Atypical Default Network Connectivity in Youth with Attention-Deficit/Hyperactivity Disorder , 2010, Biological Psychiatry.

[14]  Jonathan D. Power,et al.  Prediction of Individual Brain Maturity Using fMRI , 2010, Science.

[15]  Steven C. R. Williams,et al.  Describing the Brain in Autism in Five Dimensions—Magnetic Resonance Imaging-Assisted Diagnosis of Autism Spectrum Disorder Using a Multiparameter Classification Approach , 2010, The Journal of Neuroscience.

[16]  Kaustubh Supekar,et al.  Sparse logistic regression for whole-brain classification of fMRI data , 2010, NeuroImage.

[17]  Christian Windischberger,et al.  Toward discovery science of human brain function , 2010, Proceedings of the National Academy of Sciences.

[18]  Xi-Nian Zuo,et al.  Amplitude of low-frequency oscillations in schizophrenia: A resting state fMRI study , 2010, Schizophrenia Research.

[19]  Ian H. Witten,et al.  The WEKA data mining software: an update , 2009, SKDD.

[20]  Stephen M Smith,et al.  Correspondence of the brain's functional architecture during activation and rest , 2009, Proceedings of the National Academy of Sciences.

[21]  E. Bullmore,et al.  Human brain networks in health and disease , 2009, Current opinion in neurology.

[22]  C. Davatzikos,et al.  Baseline and longitudinal patterns of brain atrophy in MCI patients, and their use in prediction of short-term conversion to AD: Results from ADNI , 2009, NeuroImage.

[23]  Noël Staeren,et al.  Combining multivariate voxel selection and support vector machines for mapping and classification of fMRI spatial patterns , 2008, NeuroImage.

[24]  M. Brammer,et al.  Neuroanatomy of verbal working memory as a diagnostic biomarker for depression , 2008, Neuroreport.

[25]  Masa-aki Sato,et al.  Sparse estimation automatically selects voxels relevant for the decoding of fMRI activity patterns , 2008, NeuroImage.

[26]  Chaozhe Zhu,et al.  An improved approach to detection of amplitude of low-frequency fluctuation (ALFF) for resting-state fMRI: Fractional ALFF , 2008, Journal of Neuroscience Methods.

[27]  Chih-Jen Lin,et al.  LIBLINEAR: A Library for Large Linear Classification , 2008, J. Mach. Learn. Res..

[28]  Yufeng Wang,et al.  Fisher discriminative analysis of resting-state brain function for attention-deficit/hyperactivity disorder , 2008, NeuroImage.

[29]  B. Biswal,et al.  Cingulate-Precuneus Interactions: A New Locus of Dysfunction in Adult Attention-Deficit/Hyperactivity Disorder , 2008, Biological Psychiatry.

[30]  B. Horta,et al.  The worldwide prevalence of ADHD: a systematic review and metaregression analysis. , 2007, The American journal of psychiatry.

[31]  G. Bush,et al.  Dorsolateral Prefrontal and Anterior Cingulate Cortex Volumetric Abnormalities in Adults with Attention-Deficit/Hyperactivity Disorder Identified by Magnetic Resonance Imaging , 2006, Biological Psychiatry.

[32]  Michael P Milham,et al.  The neural correlates of attention deficit hyperactivity disorder: an ALE meta-analysis. , 2006, Journal of child psychology and psychiatry, and allied disciplines.

[33]  Kristina M. Visscher,et al.  The neural bases of momentary lapses in attention , 2006, Nature Neuroscience.

[34]  Dinggang Shen,et al.  Classification of Structural Images via High-Dimensional Image Warping, Robust Feature Extraction, and SVM , 2005, MICCAI.

[35]  Ethem Alpaydin,et al.  Introduction to machine learning , 2004, Adaptive computation and machine learning.

[36]  Yingli Lu,et al.  Regional homogeneity approach to fMRI data analysis , 2004, NeuroImage.

[37]  Suzanne E. Welcome,et al.  Cortical abnormalities in children and adolescents with attention-deficit hyperactivity disorder , 2003, The Lancet.

[38]  Isabelle Guyon,et al.  An Introduction to Variable and Feature Selection , 2003, J. Mach. Learn. Res..

[39]  R. Klein,et al.  Long-term prognosis in attention-deficit/hyperactivity disorder. , 2000, Child and adolescent psychiatric clinics of North America.

[40]  J. Friedman Special Invited Paper-Additive logistic regression: A statistical view of boosting , 2000 .

[41]  Yoav Freund,et al.  Experiments with a New Boosting Algorithm , 1996, ICML.

[42]  J. Rapoport,et al.  Quantitative brain magnetic resonance imaging in attention-deficit hyperactivity disorder. , 1996, Archives of general psychiatry.

[43]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[44]  Leo Breiman,et al.  Bagging Predictors , 1996, Machine Learning.