Dynamics of nuclear export of pre-ribosomal subunits revealed by high-speed single-molecule microscopy in live cells
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Weidong Yang | Samuel L. Junod | Mark Tingey | Karl Herbine | Joseph M. Kelich | Alexander Goryaynov
[1] Samuel L. Junod,et al. Obtaining 3D super-resolution images by utilizing rotationally symmetric structures and 2D-to-3D transformation , 2023, Computational and structural biotechnology journal.
[2] Alex D. Herbert,et al. GDSC SMLM: Single-molecule localisation microscopy software for ImageJ , 2022, Wellcome open research.
[3] Weidong Yang,et al. Spelling out the roles of individual nucleoporins in nuclear export of mRNA , 2022, Nucleus.
[4] Y. Chook,et al. Karyopherin-mediated nucleocytoplasmic transport , 2022, Nature Reviews Molecular Cell Biology.
[5] M. Dasso,et al. Distinct roles of nuclear basket proteins in directing the passage of mRNA through the nuclear pore , 2021, Proceedings of the National Academy of Sciences.
[6] U. Kutay,et al. Nuclear export of the pre-60S ribosomal subunit through single nuclear pores observed in real time , 2021, Nature Communications.
[7] M. Rout,et al. One Ring to Rule them All? Structural and Functional Diversity in the Nuclear Pore Complex. , 2021, Trends in biochemical sciences.
[8] Weidong Yang,et al. High-speed super-resolution imaging of rotationally symmetric structures using SPEED microscopy and 2D-to-3D transformation , 2020, Nature Protocols.
[9] M. Dong,et al. Structural snapshots of human pre-60S ribosomal particles before and after nuclear export , 2020, Nature Communications.
[10] Weidong Yang,et al. Nucleocytoplasmic transport of intrinsically disordered proteins studied by high‐speed super‐resolution microscopy , 2020, Protein science : a publication of the Protein Society.
[11] E. C. Schirmer,et al. Casting a Wider Net: Differentiating between Inner Nuclear Envelope and Outer Nuclear Envelope Transmembrane Proteins , 2019, International journal of molecular sciences.
[12] E. Lemke,et al. Molecular determinants of large cargo transport into the nucleus , 2019, bioRxiv.
[13] M. Bohnsack,et al. Uncovering the assembly pathway of human ribosomes and its emerging links to disease , 2019, The EMBO journal.
[14] J. Dauxois,et al. The path of pre-ribosomes through the nuclear pore complex revealed by electron tomography , 2019, Nature Communications.
[15] Damian Szklarczyk,et al. STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets , 2018, Nucleic Acids Res..
[16] Jan Gorodkin,et al. Cytoscape stringApp: Network analysis and visualization of proteomics data , 2018, bioRxiv.
[17] N. Samadi,et al. The roles of moonlight ribosomal proteins in the development of human cancers , 2018, Journal of cellular physiology.
[18] Weidong Yang,et al. Nuclear export of mRNA molecules studied by SPEED microscopy , 2018, Methods.
[19] A. Hoelz,et al. Structural and functional analysis of mRNA export regulation by the nuclear pore complex , 2018, Nature Communications.
[20] Wangxi Luo,et al. Nuclear Transport and Accumulation of Smad Proteins Studied by Single-Molecule Microscopy. , 2018, Biophysical journal.
[21] Roderick Y. H. Lim,et al. Axonemal Lumen Dominates Cytosolic Protein Diffusion inside the Primary Cilium , 2017, Scientific Reports.
[22] V. G. Panse,et al. Eukaryotic ribosome assembly, transport and quality control , 2017, Nature Structural &Molecular Biology.
[23] A. Astegno,et al. Determination of Hydrodynamic Radius of Proteins by Size Exclusion Chromatography. , 2017, Bio-protocol.
[24] B. Greber. Mechanistic insight into eukaryotic 60S ribosomal subunit biogenesis by cryo-electron microscopy , 2016, RNA.
[25] Weidong Yang,et al. Super-resolution 3D tomography of interactions and competition in the nuclear pore complex , 2016, Nature Structural &Molecular Biology.
[26] Weidong Yang,et al. Super-resolution imaging of nuclear import of adeno-associated virus in live cells , 2015, Molecular therapy. Methods & clinical development.
[27] J. Woolford,et al. Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo. , 2015, Annual review of biochemistry.
[28] Jimin Pei,et al. LocNES: a computational tool for locating classical NESs in CRM1 cargo proteins , 2015, Bioinform..
[29] E. Hurt,et al. NTF2-like domain of Tap plays a critical role in cargo mRNA recognition and export , 2015, Nucleic acids research.
[30] Weidong Yang,et al. Role of Molecular Charge in Nucleocytoplasmic Transport , 2014, PloS one.
[31] A. Zilman,et al. Large cargo transport by nuclear pores: implications for the spatial organization of FG‐nucleoporins , 2013, The EMBO journal.
[32] N. Walter,et al. High-resolution three-dimensional mapping of mRNA export through the nuclear pore , 2013, Nature Communications.
[33] Weidong Yang. Distinct, but not completely separate spatial transport routes in the nuclear pore complex , 2013, Nucleus.
[34] Daniel N. Wilson,et al. Structures of the human and Drosophila 80S ribosome , 2013, Nature.
[35] D. Görlich,et al. Systematic analysis of barrier-forming FG hydrogels from Xenopus nuclear pore complexes , 2012, The EMBO journal.
[36] Johannes E. Schindelin,et al. Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.
[37] Weidong Yang,et al. Self-regulated viscous channel in the nuclear pore complex , 2012, Proceedings of the National Academy of Sciences.
[38] S. Musser,et al. Single molecule studies of nucleocytoplasmic transport. , 2011, Biochimica et biophysica acta.
[39] C. Dekker,et al. Single-molecule transport across an individual biomimetic nuclear pore complex. , 2011, Nature nanotechnology.
[40] André Hoelz,et al. The structure of the nuclear pore complex. , 2011, Annual review of biochemistry.
[41] Constance Jeffery,et al. Moonlighting proteins , 2010, Genome Biology.
[42] Peter Horvath,et al. A Protein Inventory of Human Ribosome Biogenesis Reveals an Essential Function of Exportin 5 in 60S Subunit Export , 2010, PLoS biology.
[43] R. Singer,et al. In Vivo Imaging of Labelled Endogenous β-actin mRNA During Nucleocytoplasmic Transport , 2010, Nature.
[44] G. Fichant,et al. Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits , 2010, The Journal of cell biology.
[45] R. Kehlenbach,et al. The Part and the Whole: functions of nucleoporins in nucleocytoplasmic transport. , 2010, Trends in cell biology.
[46] Weidong Yang,et al. Three-dimensional distribution of transient interactions in the nuclear pore complex obtained from single-molecule snapshots , 2010, Proceedings of the National Academy of Sciences.
[47] Ulrike Kutay,et al. Distinct cytoplasmic maturation steps of 40S ribosomal subunit precursors require hRio2 , 2009, The Journal of cell biology.
[48] Arlen W. Johnson,et al. Reengineering ribosome export. , 2009, Molecular biology of the cell.
[49] P. Pandolfi,et al. Nucleophosmin Serves as a Rate-Limiting Nuclear Export Chaperone for the Mammalian Ribosome , 2008, Molecular and Cellular Biology.
[50] Ed Hurt,et al. Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2. , 2007, Molecular cell.
[51] P. Zobel-Thropp,et al. Ltv1 Is Required for Efficient Nuclear Export of the Ribosomal Small Subunit in Saccharomyces cerevisiae , 2006, Genetics.
[52] Pierre-Emmanuel Gleizes,et al. Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function. , 2005, Molecular cell.
[53] Valérie Choesmel,et al. Nuclear export and cytoplasmic processing of precursors to the 40S ribosomal subunits in mammalian cells , 2005, The EMBO journal.
[54] J. Ellenberg,et al. Mapping the dynamic organization of the nuclear pore complex inside single living cells , 2004, Nature Cell Biology.
[55] J. Gelles,et al. Imaging of single-molecule translocation through nuclear pore complexes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[56] T. Freeman,et al. Investigation Into the use of C- and N-terminal GFP Fusion Proteins for Subcellular Localization Studies Using Reverse Transfection Microarrays , 2004, Comparative and functional genomics.
[57] Søren Brunak,et al. Analysis and prediction of leucine-rich nuclear export signals. , 2004, Protein engineering, design & selection : PEDS.
[58] David Tollervey,et al. A pre-ribosome-associated HEAT-repeat protein is required for export of both ribosomal subunits. , 2004, Genes & development.
[59] A. Helenius,et al. Nuclear import of hepatitis B virus capsids and release of the viral genome , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[60] D. Peabody. A Viral Platform for Chemical Modification and Multivalent Display , 2003, Journal of nanobiotechnology.
[61] U. Kutay,et al. Biogenesis and nuclear export of ribosomal subunits in higher eukaryotes depend on the CRM1 export pathway , 2003, Journal of Cell Science.
[62] S. R. Wente,et al. Peering through the pore: nuclear pore complex structure, assembly, and function. , 2003, Developmental cell.
[63] Arlen W. Johnson,et al. Coordinated nuclear export of 60S ribosomal subunits and NMD3 in vertebrates , 2003, The EMBO journal.
[64] E. Petfalski,et al. The path from nucleolar 90S to cytoplasmic 40S pre‐ribosomes , 2003, The EMBO journal.
[65] V. Uversky,et al. Disorder in the nuclear pore complex: The FG repeat regions of nucleoporins are natively unfolded , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[66] D. Tollervey,et al. Nuclear Export of 60S Ribosomal Subunits Depends on Xpo1p and Requires a Nuclear Export Sequence-Containing Factor, Nmd3p, That Associates with the Large Subunit Protein Rpl10p , 2001, Molecular and Cellular Biology.
[67] K Ribbeck,et al. Kinetic analysis of translocation through nuclear pore complexes , 2001, The EMBO journal.
[68] Arlen W. Johnson,et al. Nmd3p Is a Crm1p-Dependent Adapter Protein for Nuclear Export of the Large Ribosomal Subunit , 2000, The Journal of cell biology.
[69] Ed Hurt,et al. Binding of the Mex67p/Mtr2p Heterodimer to Fxfg, Glfg, and Fg Repeat Nucleoporins Is Essential for Nuclear mRNA Export , 2000, The Journal of cell biology.
[70] A. Podtelejnikov,et al. The Mex67p‐mediated nuclear mRNA export pathway is conserved from yeast to human , 1999, The EMBO journal.
[71] P. Silver,et al. A member of the Ran-binding protein family, Yrb2p, is involved in nuclear protein export. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[72] Minoru Yoshida,et al. CRM1 Is an Export Receptor for Leucine-Rich Nuclear Export Signals , 1997, Cell.
[73] Karsten Weis,et al. Exportin 1 (Crm1p) Is an Essential Nuclear Export Factor , 1997, Cell.
[74] T. Kues,et al. Nuclear transport of single molecules: dwell times at the nuclear pore complex , 2021 .
[75] Weidong Yang,et al. Structure and Function of the Nuclear Pore Complex Revealed by High-Resolution Fluorescence Microscopy , 2018 .
[76] R. Beckmann,et al. Visualizing late states of human 40S ribosomal subunit maturation , 2018, Nature.
[77] Tobias Pietzsch,et al. Fiji:anopen-sourceplatformfor biological-imageanalysis , 2012 .
[78] U. Kutay,et al. Transport between the cell nucleus and the cytoplasm. , 1999, Annual review of cell and developmental biology.