Assessing Basal and Acute Autophagic Responses in the Adult Drosophila Nervous System: The Impact of Gender, Genetics and Diet on Endogenous Pathway Profiles

The autophagy pathway is critical for the long-term homeostasis of cells and adult organisms and is often activated during periods of stress. Reduced pathway efficacy plays a central role in several progressive neurological disorders that are associated with the accumulation of cytotoxic peptides and protein aggregates. Previous studies have shown that genetic and transgenic alterations to the autophagy pathway impacts longevity and neural aggregate profiles of adult Drosophila. In this study, we have identified methods to measure the acute in vivo induction of the autophagy pathway in the adult fly CNS. Our findings indicate that the genotype, age, and gender of adult flies can influence pathway responses. Further, we demonstrate that middle-aged male flies exposed to intermittent fasting (IF) had improved neuronal autophagic profiles. IF-treated flies also had lower neural aggregate profiles, maintained more youthful behaviors and longer lifespans, when compared to ad libitum controls. In summary, we present methodology to detect dynamic in vivo changes that occur to the autophagic profiles in the adult Drosophila CNS and that a novel IF-treatment protocol improves pathway response in the aging nervous system.

[1]  S. Panda,et al.  Fasting, Circadian Rhythms, and Time-Restricted Feeding in Healthy Lifespan. , 2016, Cell metabolism.

[2]  M. Lipinski,et al.  Using Drosophila as an integrated model to study mild repetitive traumatic brain injury , 2016, Scientific Reports.

[3]  Hülya Bayır,et al.  Ischemia-induced autophagy contributes to neurodegeneration in cerebellar Purkinje cells in the developing rat brain and in primary cortical neurons in vitro. , 2015, Biochimica et biophysica acta.

[4]  D. Herr,et al.  Aging and Autophagic Function Influences the Progressive Decline of Adult Drosophila Behaviors , 2015, PloS one.

[5]  S. Groshen,et al.  A Periodic Diet that Mimics Fasting Promotes Multi-System Regeneration, Enhanced Cognitive Performance, and Healthspan. , 2015, Cell metabolism.

[6]  J. Tower Mitochondrial maintenance failure in aging and role of sexual dimorphism. , 2015, Archives of biochemistry and biophysics.

[7]  T. Lamark,et al.  p62/Sequestosome-1, Autophagy-related Gene 8, and Autophagy in Drosophila Are Regulated by Nuclear Factor Erythroid 2-related Factor 2 (NRF2), Independent of Transcription Factor TFEB* , 2015, The Journal of Biological Chemistry.

[8]  M. Vinciguerra,et al.  Interventions to Slow Aging in Humans: Are We Ready? , 2015, Aging cell.

[9]  J. Blesa,et al.  α-Synuclein-Independent Histopathological and Motor Deficits in Mice Lacking the Endolysosomal Parkinsonism Protein Atp13a2 , 2015, The Journal of Neuroscience.

[10]  O. Garaschuk,et al.  Neuroinflammation in Alzheimer's disease , 2015, The Lancet Neurology.

[11]  G. Juhász,et al.  How and why to study autophagy in Drosophila: It’s more than just a garbage chute , 2015, Methods.

[12]  S. Panda,et al.  Time-restricted feeding attenuates age-related cardiac decline in Drosophila , 2015, Science.

[13]  E. Feldman,et al.  Insulin resistance as a key link for the increased risk of cognitive impairment in the metabolic syndrome , 2015, Experimental & Molecular Medicine.

[14]  M. Mattson Lifelong brain health is a lifelong challenge: From evolutionary principles to empirical evidence , 2015, Ageing Research Reviews.

[15]  H. Bellen,et al.  Huntingtin Functions as a Scaffold for Selective Macroautophagy , 2015, Nature Cell Biology.

[16]  A. Cuervo,et al.  Defective macroautophagic turnover of brain lipids in the TgCRND8 Alzheimer mouse model: prevention by correcting lysosomal proteolytic deficits. , 2014, Brain : a journal of neurology.

[17]  Michael Mosley,et al.  Meal frequency and timing in health and disease , 2014, Proceedings of the National Academy of Sciences.

[18]  M. Mattson,et al.  Exercise, Energy Intake, Glucose Homeostasis, and the Brain , 2014, The Journal of Neuroscience.

[19]  M. Lipinski,et al.  Impaired autophagy flux is associated with neuronal cell death after traumatic brain injury , 2014, Autophagy.

[20]  J. Giebultowicz,et al.  Relationships between the Circadian System and Alzheimer's Disease-Like Symptoms in Drosophila , 2014, PloS one.

[21]  T. Murphy,et al.  Effects of Diet on Brain Plasticity in Animal and Human Studies: Mind the Gap , 2014, Neural plasticity.

[22]  G. Juhász,et al.  The Putative HORMA Domain Protein Atg101 Dimerizes and Is Required for Starvation-Induced and Selective Autophagy in Drosophila , 2014, BioMed research international.

[23]  M. F. Ceriani,et al.  Amyloid peptides ABri and ADan show differential neurotoxicity in transgenic Drosophila models of familial British and Danish dementia , 2014, Molecular Neurodegeneration.

[24]  G. Juhász,et al.  Atg17/FIP200 localizes to perilysosomal Ref(2)P aggregates and promotes autophagy by activation of Atg1 in Drosophila , 2014, Autophagy.

[25]  N. Mizushima,et al.  Expression of the autophagy substrate SQSTM1/p62 is restored during prolonged starvation depending on transcriptional upregulation and autophagy-derived amino acids , 2014, Autophagy.

[26]  F. Sharp,et al.  Autophagy in the brain of neonates following hypoxia–ischemia shows sex- and region-specific effects , 2014, Neuroscience.

[27]  D. Herr,et al.  Identification of Sphingolipid Metabolites That Induce Obesity via Misregulation of Appetite, Caloric Intake and Fat Storage in Drosophila , 2013, PLoS genetics.

[28]  Jing W. Wang,et al.  A single-fly assay for foraging behavior in Drosophila. , 2013, Journal of visualized experiments : JoVE.

[29]  Sooyeon Lee,et al.  Dietary restriction supports peripheral nerve health by enhancing endogenous protein quality control mechanisms , 2013, Experimental Gerontology.

[30]  G. Juhász,et al.  Evolutionarily conserved role and physiological relevance of a STX17/Syx17 (syntaxin 17)-containing SNARE complex in autophagosome fusion with endosomes and lysosomes , 2013, Autophagy.

[31]  G. Juhász,et al.  Autophagosomal Syntaxin17-dependent lysosomal degradation maintains neuronal function in Drosophila , 2013, The Journal of cell biology.

[32]  L. Partridge,et al.  Ageing Increases Vulnerability to Aβ42 Toxicity in Drosophila , 2012, Alzheimer's & Dementia.

[33]  M. Komatsu,et al.  Autophagy: More Than a Nonselective Pathway , 2012, International journal of cell biology.

[34]  Donald A Wilson,et al.  Sensory Network Dysfunction, Behavioral Impairments, and Their Reversibility in an Alzheimer's β-Amyloidosis Mouse Model , 2011, The Journal of Neuroscience.

[35]  Zhiyong Cheng,et al.  IRS2 increases mitochondrial dysfunction and oxidative stress in a mouse model of Huntington disease. , 2011, The Journal of clinical investigation.

[36]  M. Tatar,et al.  Insulin receptor substrate chico acts with the transcription factor FOXO to extend Drosophila lifespan , 2011, Aging cell.

[37]  I. Nezis,et al.  p62, Ref(2)P and ubiquitinated proteins are conserved markers of neuronal aging, aggregate formation and progressive autophagic defects , 2011, Autophagy.

[38]  J. Hauw,et al.  Neuropathology of Sleep Disorders: A Review , 2011, Journal of neuropathology and experimental neurology.

[39]  W. Kiosses,et al.  Short-term fasting induces profound neuronal autophagy , 2010, Autophagy.

[40]  R. Xavier,et al.  Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease , 2010, Proceedings of the National Academy of Sciences.

[41]  G. Bjørkøy,et al.  p62/SQSTM1 and ALFY interact to facilitate the formation of p62 bodies/ALIS and their degradation by autophagy , 2010, Autophagy.

[42]  M. Dale,et al.  Review: Obesity and Alzheimer’s Disease: A Link Between Body Weight and Cognitive Function in Old Age , 2009, American journal of Alzheimer's disease and other dementias.

[43]  M. Diaz-Meco,et al.  To aggregate or not to aggregate? A new role for p62 , 2009, EMBO reports.

[44]  R. Wessells,et al.  Exercise-Training in Young Drosophila melanogaster Reduces Age-Related Decline in Mobility and Cardiac Performance , 2009, PloS one.

[45]  P. Maher,et al.  Metabolic links between diabetes and Alzheimer’s disease , 2009, Expert review of neurotherapeutics.

[46]  Simon C Watkins,et al.  Starving Neurons Show Sex Difference in Autophagy* , 2009, Journal of Biological Chemistry.

[47]  Jessica E. Young,et al.  Nutrient Deprivation Induces Neuronal Autophagy and Implicates Reduced Insulin Signaling in Neuroprotective Autophagy Activation* , 2009, Journal of Biological Chemistry.

[48]  L. Partridge,et al.  Effect of a Standardised Dietary Restriction Protocol on Multiple Laboratory Strains of Drosophila melanogaster , 2009, PloS one.

[49]  R. Youle,et al.  Parkin is recruited selectively to impaired mitochondria and promotes their autophagy , 2008, The Journal of cell biology.

[50]  V. Herrera,et al.  Sex-specific hippocampus-dependent cognitive deficits and increased neuronal autophagy in DEspR haploinsufficiency in mice. , 2008, Physiological genomics.

[51]  Ralph A. Nixon,et al.  Autophagy Induction and Autophagosome Clearance in Neurons: Relationship to Autophagic Pathology in Alzheimer's Disease , 2008, The Journal of Neuroscience.

[52]  Kyung-Jin Min,et al.  Drosophila lifespan control by dietary restriction independent of insulin-like signaling , 2008, Aging cell.

[53]  A. Brech,et al.  Promoting basal levels of autophagy in the nervous system enhances longevity and oxidant resistance in adult Drosophila , 2008, Autophagy.

[54]  T. P. Neufeld,et al.  Drosophila Atg7: Required for stress resistance, longevity and neuronal homeostasis, but not for metamorphosis , 2008, Autophagy.

[55]  M. Driscoll,et al.  A Role for Autophagy in the Extension of Lifespan by Dietary Restriction in C. elegans , 2008, PLoS genetics.

[56]  T. P. Neufeld,et al.  Atg7-dependent autophagy promotes neuronal health, stress tolerance, and longevity but is dispensable for metamorphosis in Drosophila. , 2007, Genes & development.

[57]  Ralph A. Nixon,et al.  Autophagy, amyloidogenesis and Alzheimer disease , 2007, Journal of Cell Science.

[58]  Kailiang Jia,et al.  Autophagy is Required for Dietary Restriction-Mediated Life Span Extension in C. elegans , 2007, Autophagy.

[59]  G. Bjørkøy,et al.  p62/SQSTM1 Binds Directly to Atg8/LC3 to Facilitate Degradation of Ubiquitinated Protein Aggregates by Autophagy* , 2007, Journal of Biological Chemistry.

[60]  M. White,et al.  Brain IRS2 Signaling Coordinates Life Span and Nutrient Homeostasis , 2007, Science.

[61]  A. Simonsen,et al.  Linking Lysosomal Trafficking Defects with Changes in Aging and Stress Response in Drosophila , 2007, Autophagy.

[62]  Susan Cheng,et al.  Genetic Modifiers of the Drosophila Blue Cheese Gene Link Defects in Lysosomal Transport With Decreased Life Span and Altered Ubiquitinated-Protein Profiles , 2007, Genetics.

[63]  P. Seglen,et al.  How Shall I Eat Thee? , 2007, Autophagy.

[64]  M. Mattson,et al.  Intermittent fasting and caloric restriction ameliorate age-related behavioral deficits in the triple-transgenic mouse model of Alzheimer's disease , 2007, Neurobiology of Disease.

[65]  J. Lippincott-Schwartz,et al.  Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomes , 2006, Journal of Cell Science.

[66]  Hideyuki Okano,et al.  Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice , 2006, Nature.

[67]  Masaaki Komatsu,et al.  Loss of autophagy in the central nervous system causes neurodegeneration in mice , 2006, Nature.

[68]  J. Rothman,et al.  Autophagy-mediated clearance of huntingtin aggregates triggered by the insulin-signaling pathway , 2006, The Journal of cell biology.

[69]  D. Epps,et al.  Isoform-specific interactions of human apolipoprotein E to an intermediate conformation of human Alzheimer amyloid-beta peptide. , 2005, Chemistry and physics of lipids.

[70]  D. Klionsky,et al.  Autophagosomes: biogenesis from scratch? , 2005, Current opinion in cell biology.

[71]  Ana Maria Cuervo,et al.  Autophagy and Aging: The Importance of Maintaining "Clean" Cells , 2005, Autophagy.

[72]  J. Gargano,et al.  Rapid iterative negative geotaxis (RING): a new method for assessing age-related locomotor decline in Drosophila , 2005, Experimental Gerontology.

[73]  Ralph A. Nixon,et al.  Extensive Involvement of Autophagy in Alzheimer Disease: An Immuno-Electron Microscopy Study , 2005, Journal of neuropathology and experimental neurology.

[74]  M. Tatar,et al.  Drosophila dFOXO controls lifespan and regulates insulin signalling in brain and fat body , 2004, Nature.

[75]  Francesco Scaravilli,et al.  Inhibition of mTOR induces autophagy and reduces toxicity of polyglutamine expansions in fly and mouse models of Huntington disease , 2004, Nature Genetics.

[76]  M. Mckeown,et al.  blue cheese Mutations Define a Novel, Conserved Gene Involved in Progressive Neural Degeneration , 2003, The Journal of Neuroscience.

[77]  E. Hafen,et al.  Extension of Life-Span by Loss of CHICO, a Drosophila Insulin Receptor Substrate Protein , 2001, Science.

[78]  K. White,et al.  Association of the neuron-specific RNA binding domain-containing protein ELAV with the coiled body inDrosophila neurons , 1997, Chromosoma.

[79]  C. Rickert,et al.  The homeobox gene repo is required for the differentiation and maintenance of glia function in the embryonic nervous system of Drosophila melanogaster. , 1995, Development.

[80]  Jiandie D. Lin,et al.  Temporal orchestration of circadian autophagy rhythm by C/EBPβ , 2011 .

[81]  R. Nixon,et al.  Monitoring autophagy in Alzheimer's disease and related neurodegenerative diseases. , 2009, Methods in enzymology.

[82]  T. P. Neufeld,et al.  Experimental control and characterization of autophagy in Drosophila. , 2008, Methods in molecular biology.