Computer-aided Diagnosis for Lung Cancer: Usefulness of Nodule Heterogeneity.

RATIONALE AND OBJECTIVES To develop a computer-aided diagnosis system to differentiate between malignant and benign nodules. MATERIALS AND METHODS Seventy-three lung nodules revealed on 60 sets of computed tomography (CT) images were analyzed. Contrast-enhanced CT was performed in 46 CT examinations. The images were provided by the LUNGx Challenge, and the ground truth of the lung nodules was unavailable; a surrogate ground truth was, therefore, constructed by radiological evaluation. Our proposed method involved novel patch-based feature extraction using principal component analysis, image convolution, and pooling operations. This method was compared to three other systems for the extraction of nodule features: histogram of CT density, local binary pattern on three orthogonal planes, and three-dimensional random local binary pattern. The probabilistic outputs of the systems and surrogate ground truth were analyzed using receiver operating characteristic analysis and area under the curve. The LUNGx Challenge team also calculated the area under the curve of our proposed method based on the actual ground truth of their dataset. RESULTS Based on the surrogate ground truth, the areas under the curve were as follows: histogram of CT density, 0.640; local binary pattern on three orthogonal planes, 0.688; three-dimensional random local binary pattern, 0.725; and the proposed method, 0.837. Based on the actual ground truth, the area under the curve of the proposed method was 0.81. CONCLUSIONS The proposed method could capture discriminative characteristics of lung nodules and was useful for the differentiation between malignant and benign nodules.

[1]  Armando Manduca,et al.  Adaptive nonlocal means filtering based on local noise level for CT denoising. , 2013, Medical physics.

[2]  E. DeLong,et al.  Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach. , 1988, Biometrics.

[3]  Yurii S. Aulchenko,et al.  PredictABEL: an R package for the assessment of risk prediction models , 2011, European Journal of Epidemiology.

[4]  A. Jemal,et al.  Cancer statistics, 2014 , 2014, CA: a cancer journal for clinicians.

[5]  Takeshi Nakaura,et al.  Pulmonary nodules: estimation of malignancy at thin-section helical CT--effect of computer-aided diagnosis on performance of radiologists. , 2006, Radiology.

[6]  K. Doi,et al.  Usefulness of an artificial neural network for differentiating benign from malignant pulmonary nodules on high-resolution CT: evaluation with receiver operating characteristic analysis. , 2002, AJR. American journal of roentgenology.

[7]  Xavier Robin,et al.  pROC: an open-source package for R and S+ to analyze and compare ROC curves , 2011, BMC Bioinformatics.

[8]  M. Pencina,et al.  Evaluating the added predictive ability of a new marker: From area under the ROC curve to reclassification and beyond , 2008, Statistics in medicine.

[9]  Abbas Z. Kouzani,et al.  Automated detection of lung nodules in computed tomography images: a review , 2010, Machine Vision and Applications.

[10]  Kenji Suzuki A review of computer-aided diagnosis in thoracic and colonic imaging. , 2012, Quantitative imaging in medicine and surgery.

[11]  Hui Chen,et al.  Neural network ensemble-based computer-aided diagnosis for differentiation of lung nodules on CT images: clinical evaluation. , 2010, Academic radiology.

[12]  Shu Liao,et al.  Sparse Patch-Based Label Propagation for Accurate Prostate Localization in CT Images , 2013, IEEE Transactions on Medical Imaging.

[13]  K. Doi,et al.  Computerized scheme for determination of the likelihood measure of malignancy for pulmonary nodules on low-dose CT images. , 2003, Medical physics.

[14]  Jason Weston,et al.  Gene Selection for Cancer Classification using Support Vector Machines , 2002, Machine Learning.

[15]  Daniel Rueckert,et al.  Multiple instance learning for classification of dementia in brain MRI , 2013, Medical Image Anal..

[16]  Lubomir M. Hadjiiski,et al.  Computer-aided diagnosis of pulmonary nodules on CT scans: segmentation and classification using 3D active contours. , 2006, Medical physics.

[17]  P. Lambin,et al.  Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach , 2014, Nature Communications.

[18]  C. Gatsonis,et al.  Reduced Lung-Cancer Mortality with Low-Dose Computed Tomographic Screening , 2012 .

[19]  Ron Kikinis,et al.  Volumetric CT-based segmentation of NSCLC using 3D-Slicer , 2013, Scientific Reports.

[20]  Ayman El-Baz,et al.  Computer-Aided Diagnosis Systems for Lung Cancer: Challenges and Methodologies , 2013, Int. J. Biomed. Imaging.

[21]  Karen Drukker,et al.  LUNGx Challenge for computerized lung nodule classification: reflections and lessons learned. , 2015, Journal of medical imaging.

[22]  Yong Fan,et al.  Random local binary pattern based label learning for multi-atlas segmentation , 2015, Medical Imaging.

[23]  Igor V. Tetko,et al.  Neural network studies, 1. Comparison of overfitting and overtraining , 1995, J. Chem. Inf. Comput. Sci..

[24]  Yeni Herdiyeni,et al.  Comparison of 2D and 3D Local Binary Pattern in Lung Cancer Diagnosis , 2012 .

[25]  E. Kazerooni,et al.  Computer-aided diagnosis of lung nodules on CT scans: ROC study of its effect on radiologists' performance. , 2010, Academic radiology.

[26]  Thomas Martinetz,et al.  Simple Method for High-Performance Digit Recognition Based on Sparse Coding , 2008, IEEE Transactions on Neural Networks.

[27]  Kunio Doi,et al.  Improving radiologists' recommendations with computer-aided diagnosis for management of small nodules detected by CT. , 2006, Academic radiology.

[28]  Matti Pietikäinen,et al.  A comparative study of texture measures with classification based on featured distributions , 1996, Pattern Recognit..

[29]  Vicky Goh,et al.  Quantifying tumour heterogeneity in 18F-FDG PET/CT imaging by texture analysis , 2012, European Journal of Nuclear Medicine and Molecular Imaging.

[30]  Matti Pietikäinen,et al.  Dynamic Texture Recognition Using Local Binary Patterns with an Application to Facial Expressions , 2007, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[31]  Chih-Jen Lin,et al.  LIBSVM: A library for support vector machines , 2011, TIST.

[32]  Yasuji Oshiro,et al.  Erratum to: Kurtosis and skewness assessments of solid lung nodule density histograms: differentiating malignant from benign nodules on CT , 2014, Japanese Journal of Radiology.

[33]  Matti Pietikäinen,et al.  Multiresolution Gray-Scale and Rotation Invariant Texture Classification with Local Binary Patterns , 2002, IEEE Trans. Pattern Anal. Mach. Intell..

[34]  D. Aberle,et al.  Computed tomography screening for lung cancer: has it finally arrived? Implications of the national lung screening trial. , 2013, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.