Prioritizing human cancer microRNAs based on genes’ functional consistency between microRNA and cancer
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Shangwei Ning | Huan Ren | Sali Lv | Xia Li | Jie Sun | Xia Li | S. Ning | Qianghu Wang | Teng-Rui Huang | H. Ren | Sali Lv | Yixue Li | Xi-shan Wang | Jie Sun | Qianghu Wang | Yan Zheng | Teng Huang | Yan Zheng | Yixue Li | Qifan Zheng | Jin Xu | Xishan Wang | Qifan Zheng | Jin Xu | Shangwei Ning | Teng Huang | Q. Zheng
[1] Eva E. Rufino-Palomares,et al. MicroRNAs as Oncogenes and Tumor Suppressors , 2013 .
[2] Anton J. Enright,et al. Messenger RNA and microRNA profiling during early mouse EB formation. , 2011, Gene expression patterns : GEP.
[3] Catia Pesquita,et al. Application of gene ontology to gene identification. , 2011, Methods in molecular biology.
[4] J. Chi,et al. MicroRNA expression in Sezary syndrome: identification, function, and diagnostic potential. , 2010, Blood.
[5] Bing Hu,et al. MicroRNAs target gene and signaling pathway by bioinformatics analysis in the cardiac hypertrophy. , 2010, Biochemical and biophysical research communications.
[6] Dong Wang,et al. Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases , 2010, Bioinform..
[7] B. H. Miller,et al. MicroRNA dysregulation in psychiatric disease , 2010, Brain Research.
[8] Catalin C. Barbacioru,et al. Tracing the Derivation of Embryonic Stem Cells from the Inner Cell Mass by Single-Cell RNA-Seq Analysis , 2010, Cell stem cell.
[9] M. Loda,et al. Identification of the miR-106b~25 MicroRNA Cluster as a Proto-Oncogenic PTEN-Targeting Intron That Cooperates with Its Host Gene MCM7 in Transformation , 2010, Science Signaling.
[10] Christina Backes,et al. A dictionary on microRNAs and their putative target pathways , 2010, Nucleic acids research.
[11] J. Rivas,et al. Deregulation of microRNA expression in the different genetic subtypes of multiple myeloma and correlation with gene expression profiling , 2010, Leukemia.
[12] Ujjwal Maulik,et al. Development of the human cancer microRNA network , 2010 .
[13] Giorgio Valle,et al. The Gene Ontology in 2010: extensions and refinements , 2009, Nucleic Acids Res..
[14] P. M. Voorhoeve,et al. MicroRNAs: Oncogenes, tumor suppressors or master regulators of cancer heterogeneity? , 2010, Biochimica et biophysica acta.
[15] Zhao-dian Chen,et al. Up-regulation of microRNA in bladder tumor tissue is not common , 2010, International Urology and Nephrology.
[16] Monte Westerfield,et al. Linking Human Diseases to Animal Models Using Ontology-Based Phenotype Annotation , 2009, PLoS biology.
[17] Paula K Shireman,et al. Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis , 2009 .
[18] W. Kibbe,et al. Annotating the human genome with Disease Ontology , 2009, BMC Genomics.
[19] B. White,et al. Coordinate Regulation of FOXO1 by miR-27a, miR-96, and miR-182 in Breast Cancer Cells , 2009, The Journal of Biological Chemistry.
[20] Yang Li,et al. Role of the miR‐106b‐25 microRNA cluster in hepatocellular carcinoma , 2009, Cancer science.
[21] Phillip W. Lord,et al. Semantic Similarity in Biomedical Ontologies , 2009, PLoS Comput. Biol..
[22] Sanghamitra Bandyopadhyay,et al. Analyzing miRNA co-expression networks to explore TF-miRNA regulation , 2009, BMC Bioinformatics.
[23] R. Speich,et al. Interleukin-6 Modulates the Expression of the Bone Morphogenic Protein Receptor Type II Through a Novel STAT3–microRNA Cluster 17/92 Pathway , 2009, Circulation research.
[24] G. Calin,et al. Specific activation of microRNA106b enables the p73 apoptotic response in chronic lymphocytic leukemia by targeting the ubiquitin ligase Itch for degradation. , 2009, Blood.
[25] Richard Grundy,et al. The miR-17/92 polycistron is up-regulated in sonic hedgehog-driven medulloblastomas and induced by N-myc in sonic hedgehog-treated cerebellar neural precursors. , 2009, Cancer research.
[26] A. Delacourte,et al. MicroRNA regulation of Alzheimer's Amyloid precursor protein expression , 2009, Neurobiology of Disease.
[27] N. Lynam‐Lennon,et al. The roles of microRNA in cancer and apoptosis , 2009, Biological reviews of the Cambridge Philosophical Society.
[28] V. Narry Kim,et al. Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer , 2009, Nucleic acids research.
[29] Min Liu,et al. MicroRNA-27a functions as an oncogene in gastric adenocarcinoma by targeting prohibitin. , 2009, Cancer letters.
[30] Hiroyuki Tagawa,et al. MicroRNA-17-92 down-regulates expression of distinct targets in different B-cell lymphoma subtypes. , 2008, Blood.
[31] Tongbin Li,et al. miRecords: an integrated resource for microRNA–target interactions , 2008, Nucleic Acids Res..
[32] Yadong Wang,et al. miR2Disease: a manually curated database for microRNA deregulation in human disease , 2008, Nucleic Acids Res..
[33] A. Ballabio,et al. MicroRNA target prediction by expression analysis of host genes. , 2009, Genome research.
[34] A. Bittner,et al. Characterization of global microRNA expression reveals oncogenic potential of miR-145 in metastatic colorectal cancer , 2009, BMC Cancer.
[35] P. Robinson,et al. The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease. , 2008, American journal of human genetics.
[36] C. Croce,et al. Emerging role of miR-106b-25/miR-17-92 clusters in the control of transforming growth factor beta signaling. , 2008, Cancer research.
[37] Sun Mi Park,et al. MicroRNAs: key players in the immune system, differentiation, tumorigenesis and cell death , 2008, Oncogene.
[38] C. Croce,et al. MicroRNAs regulate critical genes associated with multiple myeloma pathogenesis , 2008, Proceedings of the National Academy of Sciences.
[39] Mihaela Zavolan,et al. Elevated expression of the miR-17-92 polycistron and miR-21 in hepadnavirus-associated hepatocellular carcinoma contributes to the malignant phenotype. , 2008, The American journal of pathology.
[40] Jinjun Li,et al. Upregulation of miR‐23a∼27a∼24 decreases transforming growth factor‐beta‐induced tumor‐suppressive activities in human hepatocellular carcinoma cells , 2008, International journal of cancer.
[41] Terry Hyslop,et al. A cyclin D1/microRNA 17/20 regulatory feedback loop in control of breast cancer cell proliferation , 2008, The Journal of cell biology.
[42] H. Namba,et al. Oncogenic role of miR‐17‐92 cluster in anaplastic thyroid cancer cells , 2008, Cancer science.
[43] A. Donfrancesco,et al. Antagomir-17-5p Abolishes the Growth of Therapy-Resistant Neuroblastoma through p21 and BIM , 2008, PloS one.
[44] Jean-Baptiste Cazier,et al. Distinctive Patterns of MicroRNA Expression Associated with Karyotype in Acute Myeloid Leukaemia , 2008, PloS one.
[45] Michael Q. Zhang,et al. Network-based global inference of human disease genes , 2008, Molecular systems biology.
[46] Catia Pesquita,et al. Metrics for GO based protein semantic similarity: a systematic evaluation , 2008, BMC Bioinformatics.
[47] D. Iliopoulos,et al. E2F1-regulated microRNAs impair TGFbeta-dependent cell-cycle arrest and apoptosis in gastric cancer. , 2008, Cancer cell.
[48] Hugo Naya,et al. Small RNAs analysis in CLL reveals a deregulation of miRNA expression and novel miRNA candidates of putative relevance in CLL pathogenesis , 2008, Leukemia.
[49] L. Lim,et al. MicroRNAs in the miR-106b Family Regulate p21/CDKN1A and Promote Cell Cycle Progression , 2008, Molecular and Cellular Biology.
[50] Sanghyuk Lee,et al. miRGator: an integrated system for functional annotation of microRNAs , 2007, Nucleic Acids Res..
[51] T. Golub,et al. MicroRNA expression signatures accurately discriminate acute lymphoblastic leukemia from acute myeloid leukemia , 2007, Proceedings of the National Academy of Sciences.
[52] A. Gafni,et al. Second primary malignancy risk in thyroid cancer survivors: a systematic review and meta-analysis. , 2007, Thyroid : official journal of the American Thyroid Association.
[53] C. Croce,et al. Specific microRNAs are downregulated in human thyroid anaplastic carcinomas , 2007, Oncogene.
[54] Isaac S. Kohane,et al. Distinctive patterns of microRNA expression in primary muscular disorders , 2007, Proceedings of the National Academy of Sciences.
[55] T Takahashi,et al. Apoptosis induction by antisense oligonucleotides against miR-17-5p and miR-20a in lung cancers overexpressing miR-17-92 , 2007, Oncogene.
[56] H. Tagawa,et al. Synergistic action of the microRNA‐17 polycistron and Myc in aggressive cancer development , 2007, Cancer science.
[57] L. Lim,et al. A microRNA component of the p53 tumour suppressor network , 2007, Nature.
[58] S. Landais,et al. Oncogenic potential of the miR-106-363 cluster and its implication in human T-cell leukemia. , 2007, Cancer research.
[59] A. Barabasi,et al. The human disease network , 2007, Proceedings of the National Academy of Sciences.
[60] Michaela Scherr,et al. Expression of the miR-17-92 polycistron in chronic myeloid leukemia (CML) CD34+ cells. , 2007, Blood.
[61] Jason H. Moore,et al. Characterization of microRNA expression levels and their biological correlates in human cancer cell lines. , 2007, Cancer research.
[62] Danish Sayed,et al. MicroRNAs Play an Essential Role in the Development of Cardiac Hypertrophy , 2007, Circulation research.
[63] N. Nikitakis,et al. High mobility group A2 is a target for miRNA-98 in head and neck squamous cell carcinoma , 2007, Molecular Cancer.
[64] Stephanie A Booth,et al. Target labelling for the detection and profiling of microRNAs expressed in CNS tissue using microarrays , 2006, BMC biotechnology.
[65] C. Croce,et al. MicroRNA signatures in human cancers , 2006, Nature Reviews Cancer.
[66] M. Jovanović,et al. miRNAs and apoptosis: RNAs to die for , 2006, Oncogene.
[67] Thomas Lengauer,et al. A new measure for functional similarity of gene products based on Gene Ontology , 2006, BMC Bioinformatics.
[68] Yitzhak Pilpel,et al. Differentially Regulated Micro-RNAs and Actively Translated Messenger RNA Transcripts by Tumor Suppressor p53 in Colon Cancer , 2006, Clinical Cancer Research.
[69] R. Stephens,et al. Unique microRNA molecular profiles in lung cancer diagnosis and prognosis. , 2006, Cancer cell.
[70] C. Croce,et al. A microRNA expression signature of human solid tumors defines cancer gene targets , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[71] Chang-Zheng Chen,et al. MicroRNAs as oncogenes and tumor suppressors. , 2005, The New England journal of medicine.
[72] MicroRNA: fine-tunes the function of genes in zebrafish. , 2005, Biochemical and biophysical research communications.
[73] S. Lowe,et al. A microRNA polycistron as a potential human oncogene , 2005, Nature.
[74] H. Horvitz,et al. MicroRNA expression profiles classify human cancers , 2005, Nature.
[75] D. Bartel,et al. Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes. , 2005, RNA.
[76] Ranit Aharonov,et al. MicroRNA expression detected by oligonucleotide microarrays: system establishment and expression profiling in human tissues. , 2004, Genome research.
[77] V. Ambros. The functions of animal microRNAs , 2004, Nature.
[78] A. Barabasi,et al. Hierarchical Organization of Modularity in Metabolic Networks , 2002, Science.
[79] Thomas D. Schmittgen,et al. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.
[80] Dekang Lin,et al. An Information-Theoretic Definition of Similarity , 1998, ICML.
[81] W. Böcker,et al. [Immunohistology and prognosis in thyroid cancer. Determination of the malignancy potential of papillary and medullary neoplasms by the detection of S-100 protein and Leu-M1 antigen]. , 1989, Acta Medica Austriaca.
[82] M. DePamphilis,et al. HUMAN DISEASE , 1957, The Ulster Medical Journal.