Extracted haralick's texture features and morphological parameters from segmented multispectrale texture bio-images for classification of colon cancer cells

The automatic recognition and classification of biomedical objects can enhance work efficiency while identifying new inter-relationships among biological features. In this paper two features types, Haralick's features based GLCM are applied for classification of cancer cell of textured images and morphological parameters based of cells detection. The objective in our work is the selection of the most discriminating parameters for cancer cells classification. In this work, a new approach aiming to detect and classify colon cancer cells is presented. Our detection approach was derived from the "Snake" method but using a progressive division of the dimensions of the image to achieve faster segmentation. Classification of three cell types was based on nine morphological parameters and five Haralick's features on probabilistic neural network. Three morphological parameters and three Haralick's features were used to assess the efficiency classifications models, including Benign Hyperplasia (BH), Intraepithelial Neoplasia (IN) that is a precursor state for cancer, and Carcinoma (Ca) that corresponds to abnormal tissue proliferation (cancer). Results showed that segmentation of microscopic images using this technique was of higher efficiency than the conventional Snake method. The time consumed during segmentation was decreased to more than 50%. The efficiency of this method resides in its ability to segment Ca type cells that was difficult through other segmentation procedures. Among the nine parameters morphology and five Haralick's features used to classify cells, only three morphologic parameters (Area, Xor convex and Solidity) and three Haralick's features (Correlation, Entropy and Contrast) were found to be effective to discriminate between the three types of cells. In addition, classification of unknown cells was possible using the morphology method. However, some IN cells were wrongly classified as BH cells due to their shapes that were similar to those of BH cells. On the other side, the classification based on three parameters (Correlation, Entropy and Contrast) were found to be effective to discriminate between the three types of cells without wrong. The results obtained using several images show the efficacy of our proposed method.

[1]  Luciano da Fontoura Costa,et al.  Biological shape characterization for automatic image recognition and diagnosis of protozoan parasites of the genus Eimeria , 2007, Pattern Recognit..

[2]  Robert M. Haralick,et al.  Textural Features for Image Classification , 1973, IEEE Trans. Syst. Man Cybern..

[3]  Tony F. Chan,et al.  Active contours without edges , 2001, IEEE Trans. Image Process..

[4]  Xiaobo Zhou,et al.  Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy , 2006, IEEE Transactions on Biomedical Engineering.

[5]  Luis Weruaga,et al.  Convergence analysis of active contours , 2008, Image Vis. Comput..

[6]  Shao-Hu Peng,et al.  Texture feature extraction based on a uniformity estimation method for local brightness and structure in chest CT images , 2010, Comput. Biol. Medicine.

[7]  Michel Petit,et al.  Using SPOT–5 HRG Data in Panchromatic Mode for Operational Detection of Small Ships in Tropical Area , 2008, Sensors.

[8]  M. A. Roula Machine vision and texture analysis for the automated identification of tissue pattern in prostatic neoplasia. , 2004 .

[9]  Jie Gui,et al.  Tumor classification by combining PNN classifier ensemble with neighborhood rough set based gene reduction , 2010, Comput. Biol. Medicine.

[10]  Luciano da Fontoura Costa,et al.  A texture approach to leukocyte recognition , 2004, Real Time Imaging.

[11]  Domènec Puig,et al.  Supervised texture classification by integration of multiple texture methods and evaluation windows , 2007, Image Vis. Comput..

[12]  Abbes Amira,et al.  A quadratic classifier based on multispectral texture features for prostate cancer diagnosis , 2003, Seventh International Symposium on Signal Processing and Its Applications, 2003. Proceedings..

[13]  Anil K. Jain Fundamentals of Digital Image Processing , 2018, Control of Color Imaging Systems.

[14]  A. Bouridane,et al.  Classification of cancer cells based on Haralick's Coefficients using Multi-spectral images , 2010 .

[15]  Cenk Sokmensuer,et al.  Object-oriented texture analysis for the unsupervised segmentation of biopsy images for cancer detection , 2009, Pattern Recognit..

[16]  Barry Smith,et al.  Bridging the gap between medical and bioinformatics: An ontological case study in colon carcinoma , 2006, Comput. Biol. Medicine.

[17]  John B. Shoven,et al.  I , Edinburgh Medical and Surgical Journal.

[18]  Trygve Randen,et al.  Filtering for Texture Classification: A Comparative Study , 1999, IEEE Trans. Pattern Anal. Mach. Intell..

[19]  Camel Tanougast,et al.  A scalable and embedded FPGA architecture for efficient computation of grey level co-occurrence matrices and Haralick textures features , 2010, Microprocess. Microsystems.