Hpf-2 scope of activities and motivating applications

[1]  Anoop Gupta,et al.  An efficient block-oriented approach to parallel sparse Cholesky factorization , 1993, Supercomputing '93. Proceedings.

[2]  Ken Kennedy,et al.  Integrated Support for Task and Data Parallelism , 1994, Int. J. High Perform. Comput. Appl..

[3]  Robert Schreiber,et al.  A New Implementation of Sparse Gaussian Elimination , 1982, TOMS.

[4]  Geoffrey C. Fox,et al.  Runtime Support and Compilation Methods for User-Specified Irregular Data Distributions , 1995, IEEE Trans. Parallel Distributed Syst..

[5]  Rajeev Thakur,et al.  Compiler and runtime support for out-of-core HPF programs , 1994, ICS '94.

[6]  P. Sadayappan,et al.  Multifrontal Factorization of Sparse Matrices on Shared-Memory Multiprocessors , 1991, ICPP.

[7]  Rajeev Thakur,et al.  Compilation of out-of-core data parallel programs for distributed memory machines , 1994, CARN.

[8]  Cleve Ashcraft,et al.  A Fan-In Algorithm for Distributed Sparse Numerical Factorization , 1990, SIAM J. Sci. Comput..

[9]  David J. Kuck,et al.  A Supercomputing Performance Evaluation Plan , 1988, ICS.

[10]  C. Loan.  Computational Frameworks for the Fast Fourier Transform , 1992 .

[11]  Ian Foster,et al.  A compilation system that integrates High Performance Fortran and Fortran M , 1994, Proceedings of IEEE Scalable High Performance Computing Conference.

[12]  Barbara M. Chapman,et al.  New data-parallel language features for sparse matrix computations , 1995, Proceedings of 9th International Parallel Processing Symposium.

[13]  Michael T. Heath,et al.  Sparse Cholesky factorization on a local-memory multiprocessor , 1988 .

[14]  H. Markowitz.  The Elimination form of the Inverse and its Application to Linear Programming , 1957 .

[15]  Dror G. Feitelson,et al.  Parallel access to files in the Vesta file system , 1993, Supercomputing '93. Proceedings.

[16]  Rafael Asenjo,et al.  Sparse Block and Cyclic Data Distributions for Matrix Computations , 1995 .

[17]  M. Gerndt,et al.  SUPERB support for irregular scientific computations , 1992, Proceedings Scalable High Performance Computing Conference SHPCC-92..

[18]  P. Sadayappan,et al.  Memory-adaptive parallel sparse Cholesky factorization , 1994, Proceedings of IEEE Scalable High Performance Computing Conference.

[19]  J. G. G. Vorst,et al.  Parallel Sparse LU Decomposition on a Mesh Network of Transputers , 1993, SIAM J. Matrix Anal. Appl..

[20]  P. Sadayappan,et al.  Parallel Direct Solution of Sparse Linear Systems , 1993 .

[21]  E. D. Dahl,et al.  Mapping and Compiled Communication on the Connection Machine System , 1990, Proceedings of the Fifth Distributed Memory Computing Conference, 1990..

[22]  T. Richmond,et al.  Solvent accessible surface area and excluded volume in proteins. Analytical equations for overlapping spheres and implications for the hydrophobic effect. , 1984, Journal of molecular biology.

[23]  Harry Berryman,et al.  Run-Time Scheduling and Execution of Loops on Message Passing Machines , 1990, J. Parallel Distributed Comput..

[24]  Michael S. Woronowicz,et al.  On predicting contamination levels of HALOE optics aboard UARS using direct simulation Monte Carlo , 1993 .

[25]  Joel H. Saltz,et al.  Runtime Support Dynamic Load Balancing Strategies for Structured Adaptive Applications , 1995, PPSC.

[26]  Robert J. Harrison,et al.  Toward high-performance computational chemistry: I. Scalable Fock matrix construction algorithms , 1996, J. Comput. Chem..

[27]  Barry W. Peyton,et al.  Progress in Sparse Matrix Methods for Large Linear Systems On Vector Supercomputers , 1987 .

[28]  Piyush Mehrotra,et al.  Vienna Fortran—a Fortran language extension for distributed memory multiprocessors , 1992 .

[29]  Jerry Avorn.  Technology , 1929, Nature.

[30]  Robert B. Schnabel,et al.  Automatic mapping and load balancing of pointer-based dynamic data structures on distributed memory machines , 1992, Proceedings Scalable High Performance Computing Conference SHPCC-92..

[31]  J. Seinfeld,et al.  Development of a second-generation mathematical model for Urban air pollution—I. Model formulation , 1982 .

[32]  Siegfried Benkner.  Vienna Fortran 90 and its Compilation , 1994 .

[33]  Geoffrey C. Fox,et al.  Supporting irregular distributions in FORTRAN 90D/HPF compilers , 1994 .

[34]  Rakesh Krishnaiyer,et al.  PASSION: Parallel And Scalable Software for Input-Output , 1994 .

[35]  Warren J. Hehre,et al.  AB INITIO Molecular Orbital Theory , 1986 .

[36]  Joel H. Saltz,et al.  Run-time and compile-time support for adaptive irregular problems , 1994, Proceedings of Supercomputing '94.

[37]  I. Duff,et al.  Direct Methods for Sparse Matrices , 1987 .

[38]  J. A. Webb.  Latency and bandwidth considerations in parallel robotics image processing , 1993, Supercomputing '93.

[39]  J. T. Poole.  Preliminary survey of i/o intensive applications , 1994 .

[40]  Peter Brezany,et al.  Concurrent file operations in a high performance FORTRAN , 1992, Proceedings Supercomputing '92.

[41]  Joel H. Saltz,et al.  Communication Optimizations for Irregular Scientific Computations on Distributed Memory Architectures , 1994, J. Parallel Distributed Comput..

[42]  Ken Kennedy,et al.  Fortran D Language Specification , 1990 .

[43]  Michael T. Heath,et al.  Parallel Algorithms for Sparse Linear Systems , 1991, SIAM Rev..

[44]  A. Shrake,et al.  Environment and exposure to solvent of protein atoms. Lysozyme and insulin. , 1973, Journal of molecular biology.

[45]  Anne Rogers,et al.  Process decomposition through locality of reference , 1989, PLDI '89.

[46]  Michael Gerndt,et al.  SUPERB: A tool for semi-automatic MIMD/SIMD parallelization , 1988, Parallel Comput..

[47]  Takeo Kanade,et al.  A Multiple-Baseline Stereo , 1993, IEEE Trans. Pattern Anal. Mach. Intell..

[48]  Douglas C. Noll,et al.  Deblurring for non‐2D fourier transform magnetic resonance imaging , 1992, Magnetic resonance in medicine.

[49]  Rafael Asenjo,et al.  Sparse LU factorization on the CRAY T3D , 1995, HPCN Europe.

[50]  P. Sadayappan,et al.  Efficient transposition algorithms for large matrices , 1993, Supercomputing '93. Proceedings.

[51]  Message Passing Interface Forum.  MPI: A message - passing interface standard , 1994 .

[52]  K. Mani Chandy,et al.  Fortran M: A Language for Modular Parallel Programming , 1995, J. Parallel Distributed Comput..

[53]  P. Sadayappan,et al.  On mapping data and computation for parallel sparse Cholesky factorization , 1995, Proceedings Frontiers '95. The Fifth Symposium on the Frontiers of Massively Parallel Computation.

[54]  A. Choudhary,et al.  Design and Evaluation of primitives for Parallel I/O , 1993, Supercomputing '93.

[55]  Joel H. Saltz,et al.  Compiler and runtime support for structured and block structured applications , 1993, Supercomputing '93. Proceedings.

[56]  B. Lee,et al.  The interpretation of protein structures: estimation of static accessibility. , 1971, Journal of molecular biology.

[57]  G. C. Fox,et al.  Solving Problems on Concurrent Processors , 1988 .

[58]  Charles Koelbel,et al.  Programming data parallel algorithms on distributed memory using Kali , 1991, ICS '91.

[59]  Henri E. Bal,et al.  Programming languages for distributed computing systems , 1989, CSUR.

[60]  Steven J. Plimpton,et al.  Synthetic aperture radar image processing on parallel supercomputers , 1991, Proceedings of the 1991 ACM/IEEE Conference on Supercomputing (Supercomputing '91).

[61]  P. Sadayappan,et al.  Iteration space tiling for distributed memory machines , 1992 .

[62]  K. S. Holian,et al.  MESA: A 3-D computer code for armor/anti-armor applications , 1989 .

[63]  David H. Bailey,et al.  FFTs in external or hierarchical memory , 1989, Proceedings of the 1989 ACM/IEEE Conference on Supercomputing (Supercomputing '89).

[64]  John K. Reid,et al.  Some Design Features of a Sparse Matrix Code , 1979, TOMS.

[65]  Alok N. Choudhary,et al.  The design of VIP-FS: a virtual, parallel file system for high performance parallel and distributed computing , 1995, OPSR.

[66]  Takeo Kanade,et al.  A multiple-baseline stereo , 1991, Proceedings. 1991 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

[67]  Alok N. Choudhary,et al.  High-performance I/O for massively parallel computers: problems and prospects , 1994, Computer.

[68]  P. Sadayappan,et al.  Circuit Simulation on Shared-Memory Multiprocessors , 1988, IEEE Trans. Computers.

[69]  P. Sadayappan,et al.  Supernodal Sparse Cholesky Factorization on Distributed-Memory Multiprocessors , 1993, 1993 International Conference on Parallel Processing - ICPP'93.

[70]  Jon A. Webb.  Implementation and performance of fast parallel multi-baseline stereo vision , 1993, 1993 Computer Architectures for Machine Perception.

[71]  W. M. Gentleman,et al.  Fast Fourier Transforms: for fun and profit , 1966, AFIPS '66 (Fall).

[72]  P. Messina,et al.  Architectural requirements of parallel scientific applications with explicit communication , 1993, ISCA '93.

[73]  Edith Schonberg,et al.  A Unified Data-Flow Framework for Optimizing Communication , 1994, LCPC.

[74]  Monica S. Lam,et al.  Global optimizations for parallelism and locality on scalable parallel machines , 1993, PLDI '93.

[75]  V. Vatsa,et al.  An Integrated Runtime and Compile-time Approach for Parallelizing Structured and Block Structured Applications , 1995 .

[76]  Vipin Kumar,et al.  A Scalable Parallel Algorithm for Sparse Matrix Factorization , 1994 .

[77]  Thomas R. Gross,et al.  Do&Merge: Integrating Parallel Loops and Reductions , 1993, LCPC.

[78]  Michael Gerndt,et al.  Automatic parallelization for distributed-memory multiprocessing systems , 1989 .

[79]  A. P. Reeves,et al.  The Paragon programming paradigm and distributed memory multicomputers , 1992 .

[80]  Alok Choudhary,et al.  PASSION Runtime Library for parallel I/O , 1994, Proceedings Scalable Parallel Libraries Conference.

[81]  J. Pasciak,et al.  Computer solution of large sparse positive definite systems , 1982 .

[82]  Z. Zlatev.  Computational Methods for General Sparse Matrices , 1991 .

[83]  Michael S. Woronowicz,et al.  Spacecraft contamination investigation by direct simulation Monte Carlo - Contamination on UARS/HALOE , 1993 .

[84]  Kent D. Kimsey,et al.  CALCULATION OF ELASTIC-PLASTIC WAVE PROPAGATION ON THE CONNECTION MACHINE , 1992 .

[85]  Joel H. Saltz,et al.  Slicing Analysis and Indirect Accesses to Distributed Arrays , 1993, LCPC.

[86]  Ken Kennedy,et al.  Value-Based Distributions in Fortran D: A Preliminary Report , 1993 .

[87]  Barbara M. Chapman,et al.  A Software Architecture for Multidisciplinary Applications: Integrating Task and Data Parallelism , 1994, CONPAR.

[88]  Joel H. Saltz,et al.  Interprocedural Communication Optimizations for Distributed Memory Compilation , 1994, LCPC.

[89]  Katherine A. Yelick,et al.  Implementing an irregular application on a distributed memory multiprocessor , 1993, PPOPP '93.

[90]  Zahari Zlatev,et al.  Y12M - Solution of Large and Sparse Systems of Linear Algebraic Equations , 1981, Lecture Notes in Computer Science.

[91]  Thomas R. Gross,et al.  Exploiting task and data parallelism on a multicomputer , 1993, PPOPP '93.