Transposons: a blessing curse.

[1]  P. Nithiarasu,et al.  A multiscale active structural model of the arterial wall accounting for smooth muscle dynamics , 2018, Journal of The Royal Society Interface.

[2]  S. Jackson,et al.  Horizontal Transfer of Non-LTR Retrotransposons from Arthropods to Flowering Plants , 2017, Molecular biology and evolution.

[3]  Gengyun Zhang,et al.  Genome-wide characterization of non-reference transposable element insertion polymorphisms reveals genetic diversity in tropical and temperate maize , 2017, BMC Genomics.

[4]  S. Balzergue,et al.  Inhibition of RNA polymerase II allows controlled mobilisation of retrotransposons for plant breeding , 2017, Genome Biology.

[5]  D. Adelson,et al.  Transposable elements (TEs) contribute to stress‐related long intergenic noncoding RNAs in plants , 2017, The Plant journal : for cell and molecular biology.

[6]  R. Martienssen,et al.  Genetic and epigenetic variation of transposable elements in Arabidopsis. , 2017, Current opinion in plant biology.

[7]  Xiaofeng Cao,et al.  Transposon-mediated epigenetic regulation contributes to phenotypic diversity and environmental adaptation in rice. , 2017, Current opinion in plant biology.

[8]  Kai Guo,et al.  Domestication of rice has reduced the occurrence of transposable elements within gene coding regions , 2017, BMC Genomics.

[9]  A. Merotto,et al.  Recurrent evolution of heat-responsiveness in Brassicaceae COPIA elements , 2016, Genome Biology.

[10]  G. Mayhew,et al.  The Arabidopsis thaliana mobilome and its impact at the species level , 2016, eLife.

[11]  Detlef Weigel,et al.  Hyperosmotic stress memory in Arabidopsis is mediated by distinct epigenetically labile sites in the genome and is restricted in the male germline by DNA glycosylase activity , 2016, eLife.

[12]  H. Quesneville,et al.  Impact and insights from ancient repetitive elements in plant genomes. , 2016, Current opinion in plant biology.

[13]  Yuliya V. Karpievitch,et al.  Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation , 2016, bioRxiv.

[14]  R. Slotkin,et al.  The First Rule of Plant Transposable Element Silencing: Location, Location, Location , 2016, Plant Cell.

[15]  Sarah G. Choudury,et al.  Silencing of active transposable elements in plants. , 2015, Current opinion in plant biology.

[16]  L. Tran,et al.  A transposable element in a NAC gene is associated with drought tolerance in maize seedlings , 2015, Nature Communications.

[17]  J. Burke,et al.  Evolutionary transitions in the Asteraceae coincide with marked shifts in transposable element abundance , 2015, BMC Genomics.

[18]  Ahmad Tarmizi Hashim,et al.  Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm , 2015, Nature.

[19]  Matthew D. Schultz,et al.  Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements , 2015, eLife.

[20]  Zuxin Zhang,et al.  Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement , 2015, BMC Genomics.

[21]  Zuxin Zhang,et al.  Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement , 2015, BMC Genomics.

[22]  J. Paszkowski Controlled activation of retrotransposition for plant breeding. , 2015, Current opinion in biotechnology.

[23]  M. Zytnicki,et al.  Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation , 2015, Nature Plants.

[24]  D. Weigel,et al.  Evolution of DNA Methylation Patterns in the Brassicaceae is Driven by Differences in Genome Organization , 2014, PLoS genetics.

[25]  Nathan M. Springer,et al.  Transposable elements contribute to activation of maize genes in response to abiotic stress , 2014, bioRxiv.

[26]  M. Matzke,et al.  RNA-directed DNA methylation: an epigenetic pathway of increasing complexity , 2014, Nature Reviews Genetics.

[27]  D. Weigel,et al.  Mating system shifts and transposable element evolution in the plant genus Capsella , 2014, BMC Genomics.

[28]  H. Quesneville,et al.  Ancestral repeats have shaped epigenome and genome composition for millions of years in Arabidopsis thaliana , 2014, Nature Communications.

[29]  M. Pindo,et al.  A MITE Transposon Insertion Is Associated with Differential Methylation at the Maize Flowering Time QTL Vgt1 , 2014, G3: Genes, Genomes, Genetics.

[30]  S. Jackson,et al.  Widespread and frequent horizontal transfers of transposable elements in plants , 2014, Genome research.

[31]  Nicole Lettner,et al.  How a Retrotransposon Exploits the Plant's Heat Stress Response for Its Activation , 2014, PLoS genetics.

[32]  Xiaohong Yang,et al.  CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize , 2013, Proceedings of the National Academy of Sciences.

[33]  K. Naito,et al.  Utilization of transposable element mPing as a novel genetic tool for modification of the stress response in rice , 2013, Molecular Breeding.

[34]  Josefa González,et al.  The impact of transposable elements in environmental adaptation , 2013, Molecular ecology.

[35]  Rebecca J. Oakey,et al.  Transposable Elements Re-Wire and Fine-Tune the Transcriptome , 2013, PLoS genetics.

[36]  Damon Lisch,et al.  How important are transposons for plant evolution? , 2012, Nature Reviews Genetics.

[37]  E. Bucher,et al.  Epigenetic control of transposon transcription and mobility in Arabidopsis. , 2012, Current opinion in plant biology.

[38]  P. Bailey,et al.  Retrotransposons Control Fruit-Specific, Cold-Dependent Accumulation of Anthocyanins in Blood Oranges[W][OA] , 2012, Plant Cell.

[39]  Andreas Wagner,et al.  The predominantly selfing plant Arabidopsis thaliana experienced a recent reduction in transposable element abundance compared to its outcrossing relative Arabidopsis lyrata , 2012, Mobile DNA.

[40]  Jeffrey Ross-Ibarra,et al.  Identification of a functional transposon insertion in the maize domestication gene tb1 , 2011, Nature Genetics.

[41]  E. Bucher,et al.  An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress , 2011, Nature.

[42]  Richard M. Clark,et al.  The Arabidopsis lyrata genome sequence and the basis of rapid genome size change , 2011, Nature Genetics.

[43]  B. Gaut,et al.  The evolution of transposable elements in natural populations of self-fertilizing Arabidopsis thaliana and its outcrossing relative Arabidopsis lyrata , 2010, BMC Evolutionary Biology.

[44]  Dawn H. Nagel,et al.  The B73 Maize Genome: Complexity, Diversity, and Dynamics , 2009, Science.

[45]  Hiroki Saito,et al.  Unexpected consequences of a sudden and massive transposon amplification on rice gene expression , 2009, Nature.

[46]  Abdelhafid Bendahmane,et al.  A transposon-induced epigenetic change leads to sex determination in melon , 2009, Nature.

[47]  E. Stockinger,et al.  A Retrotransposon-Mediated Gene Duplication Underlies Morphological Variation of Tomato Fruit , 2008, Science.

[48]  J. Bennetzen,et al.  A unified classification system for eukaryotic transposable elements , 2007, Nature Reviews Genetics.

[49]  The Arabidopsis Genome Initiative Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.

[50]  B. Mcclintock,et al.  The significance of responses of the genome to challenge. , 1984, Science.

[51]  Nathan M. Springer,et al.  Transposable element influences on gene expression in plants. , 2017, Biochimica et biophysica acta. Gene regulatory mechanisms.