Trace: Tennessee Research and Creative Exchange Biochemistry, Cellular and Molecular Biology Publications and Other Works Biochemistry, Cellular and Molecular Biology Down-regulation of the Caffeic Acid O- Methyltransferase Gene in Switchgrass Reveals a Novel Monolignol Analog Recommended Citation D

[1]  F. Dohleman,et al.  Composition of cell wall phenolics and polysaccharides of the potential bioenergy crop –Miscanthus , 2011 .

[2]  R. Dixon,et al.  Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass , 2011, Proceedings of the National Academy of Sciences.

[3]  T. Zwier,et al.  Single-conformation ultraviolet and infrared spectra of jet-cooled monolignols: p-coumaryl alcohol, coniferyl alcohol, and sinapyl alcohol. , 2011, Journal of the American Chemical Society.

[4]  Jørgen Holst Christensen,et al.  Engineering traditional monolignols out of lignin by concomitant up-regulation of F5H1 and down-regulation of COMT in Arabidopsis. , 2010, The Plant journal : for cell and molecular biology.

[5]  German Spangenberg,et al.  Functional Analyses of Caffeic Acid O-Methyltransferase and Cinnamoyl-CoA-Reductase Genes from Perennial Ryegrass (Lolium perenne)[W] , 2010, Plant Cell.

[6]  Tjerk P. Straatsma,et al.  NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations , 2010, Comput. Phys. Commun..

[7]  A. Ragauskas,et al.  Structural Characterization and Comparison of Switchgrass Ball-milled Lignin Before and After Dilute Acid Pretreatment , 2010, Applied biochemistry and biotechnology.

[8]  Y. Tobimatsu,et al.  Reactivity of syringyl quinone methide intermediates in dehydrogenative polymerization I: high-yield production of synthetic lignins (DHPs) in horseradish peroxidase-catalyzed polymerization of sinapyl alcohol in the presence of nucleophilic reagents , 2010, Journal of Wood Science.

[9]  J. Ralph,et al.  Identifying new lignin bioengineering targets: 1. Monolignol-substitute impacts on lignin formation and cell wall fermentability , 2010, BMC Plant Biology.

[10]  T. Umezawa,et al.  Profiling of phenylpropanoid monomers in developing xylem tissue of transgenic aspen (Populus tremuloides) , 2010, Journal of Wood Science.

[11]  L. Rastrelli,et al.  Magnoflorine and Phenolic Derivatives from the Leaves of Croton xalapensis L. (Euphorbiaceae) , 2009, Natural product communications.

[12]  M. Bhuiya,et al.  Engineering Monolignol 4-O-Methyltransferases to Modulate Lignin Biosynthesis* , 2009, The Journal of Biological Chemistry.

[13]  Xirong Xiao,et al.  Developmental Control of Lignification in Stems of Lowland Switchgrass Variety Alamo and the Effects on Saccharification Efficiency , 2009, BioEnergy Research.

[14]  Peiqiang Yu,et al.  Physicochemical characteristics, hydroxycinnamic acids (ferulic acid, P-coumaric acid) and their ratio, and in situ biodegradability: comparison of genotypic differences among six barley varieties. , 2009, Journal of agricultural and food chemistry.

[15]  R. Hatfield,et al.  Comparing corn types for differences in cell wall characteristics and p-coumaroylation of lignin. , 2009, Journal of agricultural and food chemistry.

[16]  Jane Glazebrook,et al.  Priming in Systemic Plant Immunity , 2009, Science.

[17]  M. Head‐Gordon,et al.  Long-range corrected hybrid density functionals with damped atom-atom dispersion corrections. , 2008, Physical chemistry chemical physics : PCCP.

[18]  S. Vanin,et al.  Metabolism of (-)-grandisin from Piper solmsianum in Coleoptera and Lepidoptera species. , 2008, Phytochemistry.

[19]  Yuan Liu,et al.  Effects of Cellulose Crystallinity, Hemicellulose, and Lignin on the Enzymatic Hydrolysis of Miscanthus sinensis to Monosaccharides , 2008, Bioscience, biotechnology, and biochemistry.

[20]  Y. Tobimatsu,et al.  Azide ion as a quinone methide scavenger in the horseradish peroxidasecatalyzed polymerization of sinapyl alcohol , 2008, Journal of Wood Science.

[21]  Richard A Dixon,et al.  Lignin modification improves fermentable sugar yields for biofuel production , 2007, Nature Biotechnology.

[22]  Lee R. Lynd,et al.  Regulation of Cellulase Synthesis in Batch and Continuous Cultures of Clostridium thermocellum , 2005, Journal of bacteriology.

[23]  P. Herdewijn,et al.  Phenolic Profiling of Caffeic Acid O-Methyltransferase-Deficient Poplar Reveals Novel Benzodioxane Oligolignols1 , 2004, Plant Physiology.

[24]  B. Ahring,et al.  Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass , 2004, Applied Microbiology and Biotechnology.

[25]  J. Bell,et al.  Transgenic down-regulation of caffeic acid O-methyltransferase (COMT) led to improved digestibility in tall fescue (Festuca arundinacea). , 2004, Functional plant biology : FPB.

[26]  Richard A Dixon,et al.  Improved forage digestibility of tall fescue (Festuca arundinacea) by transgenic down-regulation of cinnamyl alcohol dehydrogenase. , 2003, Plant biotechnology journal.

[27]  L. Eriksson,et al.  Formation of β-O-4 Lignin Models -A Theoretical Study , 2003 .

[28]  Y. Barrière,et al.  A new Arabidopsis thaliana mutant deficient in the expression of O-methyltransferase impacts lignins and sinapoyl esters , 2003, Plant Molecular Biology.

[29]  L. Eriksson,et al.  A Density Functional Theory Study of Coniferyl Alcohol Intermonomeric Cross Linkages in Lignin - Three-Dimensional Structures, Stabilities and the Thermodynamic Control Hypothesis , 2003 .

[30]  Y. Barrière,et al.  Down-Regulation of Caffeic Acid O-Methyltransferase in Maize Revisited Using a Transgenic Approach1 , 2002, Plant Physiology.

[31]  R. Dixon,et al.  Structural Basis for the Modulation of Lignin Monomer Methylation by Caffeic Acid/5-Hydroxyferulic Acid 3/5-O-Methyltransferase Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.001412. , 2002, The Plant Cell Online.

[32]  W. Boerjan,et al.  NMR characterization of lignins from transgenic poplars with suppressed caffeic acid O-methyltransferase activity , 2001 .

[33]  R. Dixon,et al.  Downregulation of Caffeic Acid 3-O-Methyltransferase and Caffeoyl CoA 3-O-Methyltransferase in Transgenic Alfalfa: Impacts on Lignin Structure and Implications for the Biosynthesis of G and S Lignin , 2001, Plant Cell.

[34]  B. Chabbert,et al.  Lignification in transgenic poplars with extremely reduced caffeic acid O-methyltransferase activity. , 2000, Plant physiology.

[35]  Bärbel Hahn-Hägerdal,et al.  Fermentation of lignocellulosic hydrolysates. II: inhibitors and mechanisms of inhibition. , 2000 .

[36]  B. Cathala,et al.  Evaluation of the reproducibility of the synthesis of dehydrogenation polymer models of lignin , 1998 .

[37]  I. Chen,et al.  Studies on the Chemical Constituents of Xanthoxylum nitidum (Roxb.) D. C. (Fagara nitida Roxb.). Part 3. The Chemical Constituents of the Wood. , 1996 .

[38]  I. Chen,et al.  Studies on the Chemical Constituents of Xanthoxylum nitidum (Roxb.) D. C. (Fagara nitida Roxb.). III. The Chemical Constituents of the Wood. , 1995 .

[39]  F. Vignols,et al.  The brown midrib3 (bm3) mutation in maize occurs in the gene encoding caffeic acid O-methyltransferase. , 1995, The Plant cell.

[40]  A. Becke.  Density-functional thermochemistry. III. The role of exact exchange , 1993 .

[41]  J. Ralph,et al.  Facile large-scale synthesis of coniferyl, sinapyl, and p-coumaryl alcohol , 1992 .

[42]  P. Brodelius,et al.  Phenylpropanoid Metabolism in Suspension Cultures of Vanilla planifolia Andr. : III. Conversion of 4-Methoxycinnamic Acids into 4-Hydroxybenzoic Acids. , 1990, Plant physiology.

[43]  Norman L. Allinger,et al.  Molecular mechanics. The MM3 force field for hydrocarbons. 1 , 1989 .

[44]  N. Lewis,et al.  Plant Cell Wall Polymers: Biogenesis and Biodegradation , 1989 .

[45]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[46]  J. Ponder,et al.  An efficient newton‐like method for molecular mechanics energy minimization of large molecules , 1987 .

[47]  S. F. Boys,et al.  The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors , 1970 .

[48]  C. Wyman,et al.  Dilute acid and autohydrolysis pretreatment. , 2009, Methods in molecular biology.

[49]  Jonathan R. Mielenz,et al.  Biofuels : methods and protocols , 2009 .

[50]  Giovanni Scalmani,et al.  Gaussian 09W, revision A. 02 , 2009 .

[51]  Gerald A Tuskan,et al.  Variation of S/G ratio and lignin content in a Populus family influences the release of xylose by dilute acid hydrolysis , 2006, Applied biochemistry and biotechnology.

[52]  B. Saha,et al.  Lignocellulose biodegradation and applications in biotechnology , 2004 .

[53]  W. Boerjan,et al.  Lignin biosynthesis. , 2003, Annual review of plant biology.

[54]  W. Boerjan,et al.  NMR evidence for benzodioxane structures resulting from incorporation of 5-hydroxyconiferyl alcohol into Lignins of O-methyltransferase-deficient poplars. , 2001, Journal of agricultural and food chemistry.

[55]  A. Becke.  Density-functional thermochemistry. , 1996 .

[56]  A. Ahmed.  Daucanes and other constituents from Ferula sinaica , 1991 .

[57]  N. Lewis,et al.  Phenolic constituents of plant cell walls and wall biodegradability. , 1989 .