Gaining efficiency by parallel quantification and identification of iTRAQ-labeled peptides using HCD and decision tree guided CID/ETD on an LTQ Orbitrap.
暂无分享,去创建一个
A. Heck | A. Smit | A. Altelaar | K. Li | N. Mischerikow | Pim van Nierop | Albert J. R. Heck | P. van Nierop | Nikolai Mischerikow | Ka Wan Li | Hans-Gert Bernstein | August B. Smit | A. F. Maarten Altelaar | Hans-Gert Bernstein
[1] Scott A McLuckey,et al. Electron transfer ion/ion reactions in a three-dimensional quadrupole ion trap: reactions of doubly and triply protonated peptides with SO2*-. , 2005, Analytical chemistry.
[2] Albert J R Heck,et al. Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates , 2008, Proteomics.
[3] S. Ficarro,et al. Optimized orbitrap HCD for quantitative analysis of phosphopeptides , 2009, Journal of the American Society for Mass Spectrometry.
[4] M. Mann,et al. Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics* , 2002, Molecular & Cellular Proteomics.
[5] Madalina M. Drugan,et al. Strong Cation Exchange-based Fractionation of Lys-N-generated Peptides Facilitates the Targeted Analysis of Post-translational Modifications* , 2009, Molecular & Cellular Proteomics.
[6] A. Makarov,et al. Interfacing the orbitrap mass analyzer to an electrospray ion source. , 2003, Analytical chemistry.
[7] Ronald J. Moore,et al. Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides. , 2009, Analytical chemistry.
[8] B. Bogerts,et al. A comparison of the synaptic proteome in human chronic schizophrenia and rat ketamine psychosis suggest that prohibitin is involved in the synaptic pathology of schizophrenia , 2008, Molecular Psychiatry.
[9] B. V. Breukelen,et al. Targeted SCX Based Peptide Fractionation for Optimal Sequencing by Collision Induced, and Electron Transfer Dissociation , 2008 .
[10] M. Mann,et al. Higher-energy C-trap dissociation for peptide modification analysis , 2007, Nature Methods.
[11] Frank Fischer,et al. Targeted data acquisition for improved reproducibility and robustness of proteomic mass spectrometry assays , 2010, Journal of the American Society for Mass Spectrometry.
[12] Karl Mechtler,et al. High precision quantitative proteomics using iTRAQ on an LTQ Orbitrap: a new mass spectrometric method combining the benefits of all. , 2009, Journal of proteome research.
[13] Carla Pasquarello,et al. Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags. , 2010, Journal of proteomics.
[14] K. Parker,et al. Multiplexed Protein Quantitation in Saccharomyces cerevisiae Using Amine-reactive Isobaric Tagging Reagents*S , 2004, Molecular & Cellular Proteomics.
[15] G. McAlister,et al. Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors. , 2007, Analytical chemistry.
[16] Hongwei Xie,et al. Identification of carbonylated proteins from enriched rat skeletal muscle mitochondria using affinity chromatography‐stable isotope labeling and tandem mass spectrometry , 2007, Proteomics.
[17] S. Gygi,et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags , 1999, Nature Biotechnology.
[18] Yi Zhang,et al. Peptide and protein quantification using iTRAQ with electron transfer dissociation , 2008, Journal of the American Society for Mass Spectrometry.
[19] G. McAlister,et al. Decision tree–driven tandem mass spectrometry for shotgun proteomics , 2008, Nature Methods.
[20] Christoph H Borchers,et al. A comparison of MS/MS‐based, stable‐isotope‐labeled, quantitation performance on ESI‐quadrupole TOF and MALDI‐TOF/TOF mass spectrometers , 2009, Proteomics.
[21] R. Aebersold,et al. Mass spectrometry-based proteomics , 2003, Nature.
[22] Timothy J Griffin,et al. iTRAQ reagent-based quantitative proteomic analysis on a linear ion trap mass spectrometer. , 2007, Journal of proteome research.
[23] A. Pandey,et al. Comprehensive Comparison of Collision Induced Dissociation and Electron Transfer Dissociation , 2008, Analytical chemistry.
[24] Jeroen Krijgsveld,et al. Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics , 2003, Nature Biotechnology.
[25] Bernhard Kuster,et al. Robust and Sensitive iTRAQ Quantification on an LTQ Orbitrap Mass Spectrometer*S , 2008, Molecular & Cellular Proteomics.
[26] Jeroen Krijgsveld,et al. Mass spectrometry-based quantitative proteomics , 2004, Expert review of proteomics.
[27] M. Mann,et al. SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function , 2008, Cell.
[28] Ishtiaq Rehman,et al. iTRAQ underestimation in simple and complex mixtures: "the good, the bad and the ugly". , 2009, Journal of proteome research.
[29] B. Blagoev,et al. Stable isotope labeling by amino acids in cell culture (SILAC). , 2008, Methods in molecular biology.
[30] Beatrix Ueberheide,et al. Protein identification using sequential ion/ion reactions and tandem mass spectrometry. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[31] F. Cross,et al. Accurate quantitation of protein expression and site-specific phosphorylation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[32] Reinout Raijmakers,et al. Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics , 2009, Nature Protocols.
[33] Richard Unwin,et al. Peptide quantification using 8-plex isobaric tags and electron transfer dissociation tandem mass spectrometry. , 2009, Analytical chemistry.
[34] Ka Wan Li,et al. Quantitative proteomics and protein network analysis of hippocampal synapses of CaMKIIalpha mutant mice. , 2007, Journal of proteome research.
[35] Hongling Han,et al. Electron transfer dissociation of iTRAQ labeled peptide ions. , 2008, Journal of proteome research.
[36] J. Yates,et al. Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis. , 2004, Analytical chemistry.