Origination and Extinction through the Phanerozoic: A New Approach

Temporal patterns of origination and extinction are essential components of many paleontological studies, but it has been difficult to obtain accurate rate estimates because the observed record of first and last appearances is distorted by the incompleteness of the fossil record. Here I analyze observed first and last appearances of marine animal and microfossil genera in a way that explicitly takes incompleteness and its variation into consideration. This approach allows estimates of true rates of origination and extinction throughout the Phanerozoic. Substantial support is provided for the proposition that most rate peaks in the raw data are real in the sense that they do not arise as a consequence of temporal variability in the overall quality of the fossil record. Even though the existence of rate anomalies is supported, their timing is nevertheless open to question in many cases. If one assumes that rates of origination and extinction are constant through a given stratigraphic interval, then peaks in revised origination rates tend to be displaced backward and extinction peaks forward relative to the peaks in the raw data. If, however, one assumes a model of pulsed turnover, with true originations concentrated at lower interval boundaries and true extinctions concentrated at upper interval boundaries, the apparent timing of extinction peaks is largely reliable at face value. Thus, whereas rate anomalies may well be real, precisely when they occurred is a question that cannot be answered definitively without independent support for a model of smooth versus pulsed rate variation. The pattern of extinction, particularly the major events, is more faithfully represented in the fossil record than that of origination. There is a tendency for the major extinction events to occur during stages in which the quality of the record is relatively high and for recoveries from extinctions to occur when the record is less complete. These results imply that interpretations of origination and extinction history that depend only on the existence of rate anomalies are fairly robust, whereas interpretations of the timing of events and the temporal covariation between origination and extinction may require substantial revision.

[1]  F. T. Banner,et al.  The Cretaceous-Tertiary biotic transition , 1997, Journal of the Geological Society.

[2]  S. Peters,et al.  Determinants of extinction in the fossil record , 2002, Nature.

[3]  P. Vail,et al.  Seismic stratigraphy and global changes of sea level, Part 4 : Global cycles of relative changes of sea level , 1977 .

[4]  D. Raup The case for extraterrestrial causes of extinction. , 1989, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[5]  Arnold I. Miller,et al.  Global Ordovician faunal transitions in the marine benthos: proximate causes , 2001, Paleobiology.

[6]  C. Marshall,et al.  Sudden and Gradual Molluscan Extinctions in the Latest Cretaceous of Western European Tethys , 1996, Science.

[7]  D M Raup,et al.  A kill curve for Phanerozoic marine species , 1991, Paleobiology.

[8]  M. Gayet Systematics and the fossil record. Documenting evolutionary patterns , 1995 .

[9]  David R. Anderson,et al.  Model selection and inference : a practical information-theoretic approach , 2000 .

[10]  L. V. Van Valen A resetting of Phanerozoic community evolution , 1984 .

[11]  H. Akaike,et al.  Information Theory and an Extension of the Maximum Likelihood Principle , 1973 .

[12]  M. Conroy,et al.  Testing for variation in taxonomic extinction probabilities: a suggested methodology and some results , 1984, Paleobiology.

[13]  S. Stanley Delayed recovery and the spacing of major extinctions , 1990, Paleobiology.

[14]  Charles R. Marshall,et al.  Confidence intervals on stratigraphic ranges with nonrandom distributions of fossil horizons , 1997, Paleobiology.

[15]  A. Gale,et al.  Sea-level change and rock-record bias in the Cretaceous: a problem for extinction and biodiversity studies , 2001, Paleobiology.

[16]  N. Macleod,et al.  Hiatus distributions and mass extinctions at the Cretaceous/Tertiary boundary , 1991 .

[17]  A. Gray,et al.  I. THE ORIGIN OF SPECIES BY MEANS OF NATURAL SELECTION , 1963 .

[18]  D. J. Strauss,et al.  Extending Graphic Correlation to Many Dimensions: Stratigraphic Correlation as Constrained Optimization , 1995 .

[19]  James W. Kirchner,et al.  Evolutionary speed limits inferred from the fossil record , 2002, Nature.

[20]  A. Smith,et al.  Systematics and the Fossil Record: Documenting Evolutionary Patterns , 1994 .

[21]  D. Jablonski,et al.  Geographic variation in the molluscan recovery from the end-cretaceous extinction , 1998, Science.

[22]  J. Sepkoski,et al.  A compendium of fossil marine animal genera , 2002 .

[23]  S. Holland The quality of the fossil record: a sequence stratigraphic perspective , 2000, Paleobiology.

[24]  C. Payton Seismic Stratigraphy — Applications to Hydrocarbon Exploration , 1977 .

[25]  Erwin,et al.  U/Pb zircon geochronology and tempo of the end-permian mass extinction , 1998, Science.

[26]  Roger Pradel,et al.  ESTIMATION OF CONTRIBUTIONS TO POPULATION GROWTH: A REVERSE-TIME CAPTURE???RECAPTURE APPROACH , 2000 .

[27]  Kenneth H. Pollock,et al.  Sources of variation in extinction rates, turnover, and diversity of marine invertebrate families during the Paleozoic , 1986, Paleobiology.

[28]  '. R.Pradel Utilization of Capture-Mark-Recapture for the Study of Recruitment and Population Growth Rate , 2001 .

[29]  N. D. Newell Revolutions in the History of Life , 1967 .

[30]  M. Foote Inferring temporal patterns of preservation, origination, and extinction from taxonomic survivorship analysis , 2001, Paleobiology.

[31]  D. Jablonski Background and Mass Extinctions: The Alternation of Macroevolutionary Regimes , 1986, Science.

[32]  Philip M. Novack-Gottshall,et al.  Effects of sampling standardization on estimates of Phanerozoic marine diversification , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[33]  J. Kirchner,et al.  Correlations in fossil extinction and origination rates through geological time , 2000, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[34]  S. Holland,et al.  Extinction, invasion, and sequence stratigraphy: Patterns of faunal change in the Middle and Upper Ordovician of the eastern United States , 1996 .

[35]  J. Alroy,et al.  12. Equilibrial Diversity Dynamics in North American Mammals , 2001 .

[36]  P. Renne,et al.  Timing of the Permian–Triassic biotic crisis: implications from new zircon U/Pb age data (and their limitations) , 2001 .

[37]  A. Hallam Mass extinctions and sea-level changes , 1999 .

[38]  J. Sepkoski,et al.  A kinetic model of Phanerozoic taxonomic diversity. III. Post-Paleozoic families and mass extinctions , 1984, Paleobiology.

[39]  Roger Pradel,et al.  Utilization of capture-mark-recapture for the study of recruitment and population growth rate. , 1996 .

[40]  Arnold I. Miller,et al.  Joint estimation of sampling and turnover rates from fossil databases: capture-mark-recapture methods revisited , 2001, Paleobiology.

[41]  K. Niklas,et al.  The Quantification of Plant Biodiversity through Time , 1994 .

[42]  Arnold I. Miller,et al.  Global Ordovician faunal transitions in the marine benthos: ultimate causes , 2001, Paleobiology.

[43]  J. Sepkoski Phanerozoic Overview of Mass Extinction , 1986 .

[44]  Arnold I. Miller,et al.  Biotic transitions in global marine diversity. , 1998, Science.

[45]  G. Ludvigson,et al.  Paleozoic sequence stratigraphy : views from the North American Craton , 1996 .

[46]  C. F. Koch Species extinction across the cretaceous‐tertiary boundary: Observed patterns versus predicted sampling effects, stepwise or otherwise? , 1991 .

[47]  P. Harries,et al.  The importance of crisis progenitors in recovery from mass extinction , 1996, Geological Society, London, Special Publications.

[48]  C. A. Ross,et al.  Silurian sea-level fluctuations , 1996 .

[49]  J. Sepkoski Patterns of Phanerozoic Extinction: a Perspective from Global Data Bases , 1989 .

[50]  A. Hallam Phanerozoic Sea-Level Changes , 1992 .

[51]  S. Holland The stratigraphic distribution of fossils , 1995, Paleobiology.

[52]  David R. Anderson,et al.  AIC MODEL SELECTION IN OVERDISPERSED CAPTURE-RECAPTURE DATA' , 1994 .

[53]  J. Sepkoski,et al.  A factor analytic description of the Phanerozoic marine fossil record , 1981, Paleobiology.

[54]  S. Peters,et al.  Biodiversity in the Phanerozoic: a reinterpretation , 2001, Paleobiology.

[55]  A. Smith,et al.  Selectivity of extinction among sea urchins at the end of the Cretaceous period , 1998, Nature.

[56]  J. Sepkoski,et al.  Rates of speciation in the fossil record. , 1998, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[57]  D. Erwin,et al.  Pattern of marine mass extinction near the Permian-Triassic boundary in South China. , 2000, Science.

[58]  Kenneth H. Pollock,et al.  Design and Analysis Methods for Fish Survival Experiments Based on Release-Recapture. , 1988 .

[59]  J M Adrain,et al.  An empirical assessment of taxic paleobiology. , 2000, Science.

[60]  G. Bond Areas and volumes of cratonic sediments, western North America and eastern Europe: Comment and reply , 1977 .

[61]  Charlotte Jeffery Abt The Cretaceous-Tertiary biotic transition , 1997 .

[62]  Arnold I. Miller A new look at age and area: the geographic and environmental expansion of genera during the Ordovician Radiation , 1997, Paleobiology.

[63]  C. Marshall,et al.  Mass Extinctions and Their Aftermath , 1997 .

[64]  S. Holland,et al.  Stratigraphic Variation in the Timing of First and Last Occurrences , 2002 .

[65]  T. Jacquin,et al.  Major Transgressive/Regressive Cycles: The Stratigraphic Signature of European Basin Development , 1998 .

[66]  D. Raup,et al.  Selectivity of end-Cretaceous marine bivalve extinctions. , 1995, Science.

[67]  David R. Anderson,et al.  Statistical Inference from Band Recovery Data: A Handbook , 1978 .

[68]  D. Kendall On the Generalized "Birth-and-Death" Process , 1948 .

[69]  D. Erwin The end and the beginning: recoveries from mass extinctions. , 1998, Trends in ecology & evolution.

[70]  A. Smith,et al.  Large-scale heterogeneity of the fossil record: implications for Phanerozoic biodiversity studies. , 2001, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[71]  Arnold I. Miller,et al.  13. Scales of Diversification and the Ordovician Radiation , 2001 .

[72]  Arnold I. Miller,et al.  Association of orogenic activity with the Ordovician radiation of marine life. , 1995, Geology.

[73]  Kenneth H. Pollock,et al.  Estimating taxonomic diversity, extinction rates, and speciation rates from fossil data using capture-recapture models , 1983, Paleobiology.

[74]  S. Holland,et al.  Sequence stratigraphy and long-term paleoceanographic change in the Middle and Upper Ordovician of the eastern United States , 1996 .

[75]  M. Foote Origination and extinction components of taxonomic diversity: general problems , 2000, Paleobiology.

[76]  A. Hallam,et al.  The Pliensbachian and Tithonian extinction events , 1986, Nature.

[77]  A. Hallam Why was there a delayed radiation after the end‐Palaeozoic extinctions? , 1991 .

[78]  J. Alroy Constant extinction, constrained diversification, and uncoordinated stasis in North American mammals , 1996 .

[79]  D. Raup Cohort analysis of generic survivorship , 1978, Paleobiology.

[80]  Jere H. Lipps,et al.  Sampling bias, gradual extinction patterns and catastrophes in the fossil record , 1982 .

[81]  D. Raup,et al.  Mass Extinctions in the Marine Fossil Record , 1982, Science.

[82]  W. Kiessling,et al.  Phanerozoic Time Scale and Definition of Time Slices , 2002 .

[83]  Wang Xiaofeng,et al.  The Permian-Triassic boundary & mass extinction in China , 2001 .

[84]  D. Jablonski,et al.  Extinctions: a paleontological perspective. , 1991, Science.

[85]  J. Kirchner,et al.  Information for : Delayed biological recovery from extinctions throughout the fossil record , 1999 .

[86]  P. Coorough,et al.  Brachiopod zoogeography across the Ordovician-Silurian extinction event , 1990, Geological Society, London, Memoirs.

[87]  R. Bambach,et al.  Asymmetrical patterns of origination and extinction in higher taxa. , 1987, Paleobiology.

[88]  J. Sepkoski,et al.  Biodiversity: Past, Present, and Future , 1997, Journal of Paleontology.

[89]  M. House Strength, timing, setting and cause of mid-Palaeozoic extinctions , 2002 .

[90]  R. Plotnick,et al.  A multiplicative multifractal model for originations and extinctions , 2001, Paleobiology.

[91]  J. Crampton,et al.  Quantitative biostratigraphy of the Taranaki Basin, New Zealand: A deterministic and probabilistic approach , 2001 .

[92]  R. Fortey There are Extinctions and Extinctions: Examples from the Lower Palaeozoic , 1989 .

[93]  Arnold I. Miller,et al.  Dissecting global diversity patterns: examples from the Ordovician Radiation. , 1997, Annual review of ecology and systematics.

[94]  D. Erwin,et al.  A New Look at Evolutionary Rates in Deep Time: Uniting Paleontology and High-Precision Geochronology , 1998 .

[95]  J. Nichols,et al.  Statistical inference for capture-recapture experiments , 1992 .

[96]  M. Foote Temporal variation in extinction risk and temporal scaling of extinction metrics , 1994, Paleobiology.

[97]  B. Kummel Status of invertebrate paleontology, 1953 , 1954 .

[98]  D. Bottjer,et al.  Decoupling of taxonomic and ecologic severity of Phanerozoic marine mass extinctions , 2000 .

[99]  S. Culver,et al.  On the value of taxonomic standardization in evolutionary studies , 1987, Paleobiology.

[100]  D. Erwin Regional paleoecology of Permian gastropod genera, Southwestern United States and the End-Permian mass extinction , 1989 .

[101]  J. Hardenbol,et al.  Mesozoic and Cenozoic Sequence Stratigraphy of European Basins , 1998 .