Intestinal Transcriptomes of Nematodes: Comparison of the Parasites Ascaris suum and Haemonchus contortus with the Free-living Caenorhabditis elegans
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Makedonka Mitreva | Sahar Abubucker | James P. McCarter | R. Wilson | A. Scott | M. Mitreva | J. McCarter | John C. Martin | Sahar Abubucker | Yong Yin | D. Jasmer | Richard K. Wilson | John Martin | Alan L. Scott | Yong Yin | Douglas P. Jasmer | R. Wilson
[1] Todd Wylie,et al. Analysis and functional classification of transcripts from the nematode Meloidogyne incognita , 2003, Genome Biology.
[2] A. Loukas,et al. A survey of the intestinal transcriptomes of the hookworms, Necator americanus and Ancylostoma caninum, using tissues isolated by laser microdissection microscopy. , 2006, International journal for parasitology.
[3] Richard K. Wilson,et al. Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes , 2004, Nucleic Acids Res..
[4] A. Rehman,et al. Defined characteristics of cathepsin B-like proteins from nematodes: inferred functional diversity and phylogenetic relationships. , 1999, Molecular and biochemical parasitology.
[5] D. Jasmer,et al. Distinct characteristics of two intestinal protein compartments discriminated by using fenbendazole and a benzimidazole resistant isolate of Haemonchus contortus. , 2002, Experimental parasitology.
[6] Rolf Apweiler,et al. InterProScan: protein domains identifier , 2005, Nucleic Acids Res..
[7] S. Brooker,et al. Hookworm vaccines: past, present, and future. , 2006, The Lancet. Infectious diseases.
[8] J. McGhee,et al. Bacterial residence time in the intestine of Caenorhabditis elegans , 2007 .
[9] Redmond,et al. Further immunization and biochemical studies with a protective antigen complex from the microvillar membrane of the intestine of Haemonchus contortus , 1999, Parasite immunology.
[10] Todd Wylie,et al. Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans. , 2004, Genome research.
[11] Mark L. Blaxter,et al. A molecular evolutionary framework for the phylum Nematoda , 1998, Nature.
[12] A. Fire,et al. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans , 1998, Nature.
[13] Trevor S. Smith,et al. Vaccination of young Dorset lambs against haemonchosis , 1992, Parasite immunology.
[14] D. Jasmer,et al. Protective immunity to a blood-feeding nematode (Haemonchus contortus) induced by parasite gut antigens , 1991, Infection and immunity.
[15] Tao Cai,et al. Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabulary , 2005, Bioinform..
[16] D. Jasmer,et al. Multiple lethal effects induced by a benzimidazole anthelmintic in the anterior intestine of the nematode Haemonchus contortus. , 2000, Molecular and biochemical parasitology.
[17] A. Krogh,et al. A combined transmembrane topology and signal peptide prediction method. , 2004, Journal of molecular biology.
[18] F. N. David,et al. Principles and procedures of statistics. , 1961 .
[19] A. Coulson,et al. Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans , 2005, Nature.
[20] M. Dante,et al. Gene discovery in the adenophorean nematode Trichinella spiralis: an analysis of transcription from three life cycle stages. , 2004, Molecular and biochemical parasitology.
[21] J. McGhee. The C. elegans intestine. , 2007, WormBook : the online review of C. elegans biology.
[22] P. Tyler,et al. An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa. , 2007, Molecular phylogenetics and evolution.
[23] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[24] Anton J. Enright,et al. An efficient algorithm for large-scale detection of protein families. , 2002, Nucleic acids research.
[25] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[26] P. Myler,et al. Cathepsin B-like cysteine proteases and Caenorhabditis elegans homologues dominate gene products expressed in adult Haemonchus contortus intestine. , 2001, Molecular and biochemical parasitology.
[27] J. H. Torrie,et al. Principles and procedures of statistics: McGraw-Hill Book Company, Inc. New York Toronto London. , 1960 .
[28] A. Rehman,et al. A tissue specific approach for analysis of membrane and secreted protein antigens from Haemonchus contortus gut and its application to diverse nematode species. , 1998, Molecular and biochemical parasitology.
[29] A. Loukas,et al. Digestive proteases of blood-feeding nematodes. , 2003, Trends in parasitology.
[30] X. Gu,et al. Tissue-driven hypothesis of genomic evolution and sequence-expression correlations , 2007, Proceedings of the National Academy of Sciences.
[31] D. Barrell,et al. The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. , 2003, Genome research.
[32] W. Smith,et al. Vaccination against gastrointestinal nematode parasites of ruminants using gut-expressed antigens. , 2001, Veterinary parasitology.
[33] Cathy H. Wu,et al. InterPro, progress and status in 2005 , 2004, Nucleic Acids Res..
[34] Christian E. V. Storm,et al. Automatic clustering of orthologs and in-paralogs from pairwise species comparisons. , 2001, Journal of molecular biology.
[35] J. Claverie,et al. The significance of digital gene expression profiles. , 1997, Genome research.
[36] W. Smith. Protection in lambs immunised with Haemonchus contortus gut membrane proteins. , 1993, Research in veterinary science.
[37] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[38] Susumu Goto,et al. The KEGG resource for deciphering the genome , 2004, Nucleic Acids Res..
[39] D L Riddle,et al. Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans. , 2003, Cold Spring Harbor symposia on quantitative biology.
[40] Mark L. Blaxter,et al. prot4EST: Translating Expressed Sequence Tags from neglected genomes , 2004, BMC Bioinformatics.
[41] R. Wilson,et al. Identification and analysis of genes expressed in the adult filarial parasitic nematode Dirofilaria immitis. , 2006, International journal for parasitology.
[42] P. Urwin,et al. Meloidogyne incognita: molecular and biochemical characterisation of a cathepsin L cysteine proteinase and the effect on parasitism following RNAi. , 2007, Experimental parasitology.
[43] Y. van de Peer,et al. Molecular genealogy of some nematode taxa as based on cytochrome c and globin amino acid sequences. , 1994, Molecular phylogenetics and evolution.
[44] M. Mitreva,et al. mRNA sequences for Haemonchus contortus intestinal cathepsin B-like cysteine proteases display an extreme in abundance and diversity compared with other adult mammalian parasitic nematodes. , 2004, Molecular and biochemical parasitology.
[45] Makedonka Mitreva,et al. Comparative genomics of nematodes. , 2005, Trends in genetics : TIG.
[46] David E Hill,et al. Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. , 2004, Genome research.
[47] T. Hunter,et al. The protein kinases of Caenorhabditis elegans: a model for signal transduction in multicellular organisms. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[48] M. Kanehisa,et al. Reconstruction of amino acid biosynthesis pathways from the complete genome sequence. , 1998, Genome research.
[49] Y. Dong,et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi , 2003, Nature.
[50] M. Dante,et al. A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans , 2004, Molecular Genetics and Genomics.
[51] Jonathan E. Allen,et al. Draft Genome of the Filarial Nematode Parasite Brugia malayi , 2007, Science.
[52] Stuart K. Kim,et al. Chromosomal clustering and GATA transcriptional regulation of intestine-expressed genes in C. elegans , 2005, Development.