Oxidative Stress Defense and Deterioration of Growth-arrestedEscherichia coli Cells*

Analysis of protein carbonylation demonstrates that the stasis-induced catalases and cytoplasmic superoxide dismutases (SOD) have a role in preventing accelerated protein oxidation during growth arrest of Escherichia coli cells. A larger number of proteins are carbonylated in cells lacking cytoplasmic SOD compared with cells lacking catalases, OxyR, or RpoS which, in turn, exhibit a larger number of oxidized proteins than the wild-type parent. Proteins exclusively oxidized during stasis in mutants lacking cytoplasmic SOD include GroEL, EF-G, and the acidic isoform of H-NS indicating that these mutants experience problems in peptide elongation and maintaining protein and DNA architecture. These mutants also survive stasis poorly. Likewise, but to a much lesser extent, mutations in oxyR, an oxidative stress regulator, shorten the life-span of stationary phase cells. The low plating efficiency of cells lacking OxyR is the result of their inability to grow on standard culture plates unless plating is performed anaerobically or with high concentration of catalase. In contrast, cells lacking cytoplasmic SOD appear to die prior to plating. Our data points to the importance of oxidative stress defense in stasis survival, and we also demonstrate that the life-span of growth-arrested wild-type E. coli cells can be significantly extended by omitting oxygen.

[1]  A. Matin The molecular basis of carbon‐starvation‐induced general resistance in Escherichia coli , 1991, Molecular microbiology.

[2]  R. S. Sohal,et al.  Protein oxidative damage is associated with life expectancy of houseflies. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[3]  B. Ames,et al.  Positive control of a regulon for defenses against oxidative stress and some heat-shock proteins in Salmonella typhimurium , 1985, Cell.

[4]  P. Loewen,et al.  Genetic mapping of katF, a locus that with katE affects the synthesis of a second catalase species in Escherichia coli , 1984, Journal of bacteriology.

[5]  T. Nyström,et al.  Expression and role of the universal stress protein, UspA, of Escherichia coli during growth arrest , 1994, Molecular microbiology.

[6]  R. Levine Oxidative modification of glutamine synthetase. I. Inactivation is due to loss of one histidine residue. , 1983, The Journal of biological chemistry.

[7]  R. S. Sohal,et al.  Oxidative damage during aging targets mitochondrial aconitase. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[8]  T. Johnson,et al.  Life extension and stress resistance in Caenorhabditis elegans. modulated by the tkr-1 gene , 1998, Current Biology.

[9]  T. Nyström The glucose‐starvation stimulon of Escherichia coli: induced and repressed synthesis of enzymes of central metabolic pathways and role of acetyl phosphate in gene expression and starvation survival , 1994, Molecular microbiology.

[10]  E. Stadtman,et al.  Protein Oxidation in Aging, Disease, and Oxidative Stress* , 1997, The Journal of Biological Chemistry.

[11]  P. Loewen,et al.  Catalases HPI and HPII in Escherichia coli are induced independently. , 1985, Archives of biochemistry and biophysics.

[12]  F. Neidhardt,et al.  Gene‐Protein database of Escherichia coli K ‐ 12: Edition 3 , 1990, Electrophoresis.

[13]  B. Demple,et al.  Homeostatic regulation of intracellular hydrogen peroxide concentration in aerobically growing Escherichia coli , 1997, Journal of bacteriology.

[14]  A. Nakamura,et al.  Analysis of protein carbonyls with 2,4-dinitrophenyl hydrazine and its antibodies by immunoblot in two-dimensional gel electrophoresis. , 1996, Journal of biochemistry.

[15]  T. Nyström The trials and tribulations of growth arrest. , 1995, Trends in microbiology.

[16]  T. Nyström,et al.  Bacterial senescence: stasis results in increased and differential oxidation of cytoplasmic proteins leading to developmental induction of the heat shock regulon. , 1998, Genes & development.

[17]  T. Nyström To be or not to be: the ultimate decision of the growth‐arrested bacterial cell , 1998 .

[18]  S. Benzer,et al.  Extended life-span and stress resistance in the Drosophila mutant methuselah. , 1998, Science.

[19]  R. Hengge-aronis,et al.  Identification of a central regulator of stationary‐phase gene expression in Escherichia coli , 1991, Molecular microbiology.

[20]  R. S. Sohal,et al.  Extension of life-span by overexpression of superoxide dismutase and catalase in Drosophila melanogaster. , 1994, Science.

[21]  I. Fridovich,et al.  A superoxide dismutase mimic protects sodA sodB Escherichia coli against aerobic heating and stationary-phase death. , 1995, Archives of biochemistry and biophysics.

[22]  A. Matin,et al.  Role of RpoH, a heat shock regulator protein, in Escherichia coli carbon starvation protein synthesis and survival , 1991, Journal of bacteriology.

[23]  G. Storz,et al.  Activation of the OxyR transcription factor by reversible disulfide bond formation. , 1998, Science.

[24]  E. Cabiscol,et al.  Identification of the Major Oxidatively Damaged Proteins inEscherichia coli Cells Exposed to Oxidative Stress* , 1998, The Journal of Biological Chemistry.

[25]  T Nyström,et al.  Bacterial defense against aging: role of the Escherichia coli ArcA regulator in gene expression, readjusted energy flux and survival during stasis. , 1996, The EMBO journal.

[26]  C. Miller,et al.  Escherichia coli genes involved in cell survival during dormancy: role of oxidative stress. , 1992, Biochemical and biophysical research communications.

[27]  A. Matin,et al.  Starvation-induced cross protection against heat or H2O2 challenge in Escherichia coli , 1988, Journal of bacteriology.

[28]  Jeffrey H. Miller Experiments in molecular genetics , 1972 .

[29]  P. O’Farrell High resolution two-dimensional electrophoresis of proteins. , 1975, The Journal of biological chemistry.

[30]  M. J. Coon,et al.  Inactivation of key metabolic enzymes by mixed-function oxidation reactions: possible implication in protein turnover and ageing. , 1983, Proceedings of the National Academy of Sciences of the United States of America.