Phylogeography by diffusion on a sphere: whole world phylogeography
暂无分享,去创建一个
[1] Rodrigo Lopez,et al. Clustal W and Clustal X version 2.0 , 2007, Bioinform..
[2] Nando de Freitas,et al. An Introduction to Sequential Monte Carlo Methods , 2001, Sequential Monte Carlo Methods in Practice.
[3] Rachel S. G. Sealfon,et al. Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak , 2014, Science.
[4] M. Suchard,et al. On the biogeography of Centipeda: a species-tree diffusion approach. , 2014, Systematic biology.
[5] Alexei J. Drummond,et al. Computational statistical inference for molecular evolution and population genetics. , 2002 .
[6] R. Hudson. Gene genealogies and the coalescent process. , 1990 .
[7] Simon J. Greenhill,et al. Mapping the Origins and Expansion of the Indo-European Language Family , 2012, Science.
[8] James H. Brown,et al. Foundations of Biogeography: Classic Papers with Commentaries , 2005 .
[9] Marc A. Suchard,et al. SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics , 2011, Bioinform..
[10] M. Suchard,et al. The early spread and epidemic ignition of HIV-1 in human populations , 2014, Science.
[11] Alexei J. Drummond,et al. Bayesian Phylogeography Finds Its Roots , 2009, PLoS Comput. Biol..
[12] S. Ho,et al. Dating the origin and dispersal of hepatitis B virus infection in humans and primates , 2013, Hepatology.
[13] Nicola De Maio,et al. New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation , 2015, PLoS genetics.
[14] M. Suchard,et al. Phylogeography takes a relaxed random walk in continuous space and time. , 2010, Molecular biology and evolution.
[15] M. Suchard,et al. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. , 2012, Molecular biology and evolution.
[16] S. Sinha,et al. A “Gaussian” for diffusion on the sphere , 2012, 1303.1278.
[17] S. Ho,et al. Relaxed Phylogenetics and Dating with Confidence , 2006, PLoS biology.
[18] Forrest W. Crawford,et al. Unifying the spatial epidemiology and molecular evolution of emerging epidemics , 2012, Proceedings of the National Academy of Sciences.
[19] Dong Xie,et al. BEAST 2: A Software Platform for Bayesian Evolutionary Analysis , 2014, PLoS Comput. Biol..
[20] Ross Ihaka,et al. Gentleman R: R: A language for data analysis and graphics , 1996 .
[21] David Welch,et al. Efficient Bayesian inference under the structured coalescent , 2014, Bioinform..
[22] Remco R. Bouckaert,et al. DensiTree 2: Seeing Trees Through the Forest , 2014, bioRxiv.
[23] Remco Bouckaert,et al. Evolutionary Rates and Hbv: Issues of Rate Estimation with Bayesian Molecular Methods , 2013, Antiviral therapy.