Correspondence between spin-dynamic phases and pulse program phases of NMR spectrometers.

Spin state selective experiments have become very useful tools in solution NMR spectroscopy, particularly in the context of TROSY line narrowing. However, the practical implementation of such pulse sequences is frequently complicated by unexpected instrument behavior. Furthermore, a literal theoretical analysis of sequences published with specific phase settings can fail to rationalize such experiments and can seemingly contradict experimental findings. In this communication, we develop a practical approach to this ostensible paradox. Spin-dynamic design, rationalization, and simulation of NMR pulse sequences, as well as their confident and reliable implementation across current spectrometer hardware platforms, require precise understanding of the underlying nutation axis conventions. While currently often approached empirically, we demonstrate with a simple but general pulse program how to uncover these correspondences a priori in the general case. From this, we deduce a correspondence table between the spin-dynamic phases used in NMR theory and simulation on the one hand and pulse program phases of current commercial spectrometers on the other. As a practical application of these results, we analyze implementations of the original (1)H-(15)N TROSY experiment and illustrate how steady-state magnetization can be predictably, rather than empirically, added to a desired component. We show why and under which circumstances a literal adoption of phases from published sequences can lead to incorrect results. We suggest that pulse sequences should be consistently given with spin-dynamically correct (physical) phases, rather than in spectrometer-specific (software) syntax.

[1]  Ad Bax,et al.  Protein Backbone Dynamics and 15N Chemical Shift Anisotropy from Quantitative Measurement of Relaxation Interference Effects , 1996 .

[2]  A. Meissner,et al.  Three-dimensional protein NMR TROSY-type (15)N-resolved (1)H(N)-(1)H(N) NOESY spectra with diagonal peak suppression. , 2000, Journal of magnetic resonance.

[3]  G. Bodenhausen,et al.  Principles of nuclear magnetic resonance in one and two dimensions , 1987 .

[4]  K Wüthrich,et al.  TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[5]  L. Kay,et al.  A 4D TROSY-based pulse scheme for correlating 1HNi,15Ni,13Cαi,13C′i−1 chemical shifts in high molecular weight, 15N,13C, 2H labeled proteins , 1999, Journal of biomolecular NMR.

[6]  T. Parella,et al.  Spin-state-selective excitation in gradient-selected heteronuclear cross-polarization NMR experiments. , 2004, Journal of magnetic resonance.

[7]  Magnus Helgstrand,et al.  QSim, a program for NMR simulations , 2004, Journal of biomolecular NMR.

[8]  R. Riek,et al.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[9]  Ad Bax,et al.  Solution NMR Measurement of Amide Proton Chemical Shift Anisotropy in 15N-Enriched Proteins. Correlation with Hydrogen Bond Length§ , 1997 .

[10]  Teodor Parella A complete set of novel 2D correlation NMR experiments based on heteronuclear J-cross polarization , 2004, Journal of biomolecular NMR.

[11]  Malcolm H. Levitt,et al.  The Signs of Frequencies and Phases in NMR , 1997 .

[12]  O G Johannessen,et al.  Signs of frequencies and phases in NMR: the role of radiofrequency mixing. , 2000, Journal of magnetic resonance.

[13]  K Wüthrich,et al.  Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY , 1998, Journal of biomolecular NMR.