Phylogenetic relationship of 16 Oedipodidae species (Insecta: Orthoptera) based on the 16S rRNA gene sequences

Abstract The sequences of the mitochondrial 16S rRNA gene of 16 Oedipodidae species were amplified and sequenced. All sequences were aligned and analyzed and the phylogenetic relationships were inferred. The properties of 16S gene in Oedipodidae showed typical patterns of many insects such as a high A+T content and variable distance‐dependent transition/transversion ratios. The 0.2 weight for sites of loops may be advisable for phylogeny reconstruction using the maximum parsimony method. The phylogenetic analysis results do not support the current subfamily classification systems of Oedipodidae. Bryodemellinae and Bryodeminae are closely related and should be merged as one subfamily. The status of Oedipodinae and Locustinae is also problematic.

[1]  Michael P. Cummings,et al.  PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)] , 2004 .

[2]  J. Bond,et al.  AN ANALYSIS OF THE SECONDARY STRUCTURE OF THE MITOCHONDRIAL LARGE SUBUNIT rRNA GENE (16S) IN SPIDERS AND ITS IMPLICATIONS FOR PHYLOGENETIC RECONSTRUCTION , 2003 .

[3]  Sudhir Kumar,et al.  MEGA2: molecular evolutionary genetics analysis software , 2001, Bioinform..

[4]  J. Bond,et al.  Deep molecular divergence in the absence of morphological and ecological change in the Californian coastal dune endemic trapdoor spider Aptostichus simus , 2001, Molecular ecology.

[5]  C. Simon,et al.  Secondary structure and conserved motifs of the frequently sequenced domains IV and V of the insect mitochondrial large subunit rRNA gene , 2000, Insect molecular biology.

[6]  J. Thompson,et al.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.

[7]  C. Rowell,et al.  The phylogeny of the Caelifera (Insecta, Orthoptera) as deduced from mtrRNA gene sequences. , 1997, Molecular phylogenetics and evolution.

[8]  C. Rowell,et al.  The sequence, organization, and evolution of the Locusta migratoria mitochondrial genome , 1995, Journal of Molecular Evolution.

[9]  B. Crespi,et al.  Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers , 1994 .

[10]  J. Thompson,et al.  Mitochondrial Dna Phylogeny of the Prodoxidae (Lepidoptera: Incurvarioidea) Indicates Rapid Ecological Diversification of Yucca Moths , 1994 .

[11]  F. Sperling,et al.  Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera). , 1994, Molecular biology and evolution.

[12]  R. DeSalle,et al.  DNA sequences from a fossil termite in Oligo-Miocene amber and their phylogenetic implications. , 1992, Science.

[13]  J. Huelsenbeck,et al.  Signal, noise, and reliability in molecular phylogenetic analyses. , 1992, The Journal of heredity.

[14]  K. Bremer THE LIMITS OF AMINO ACID SEQUENCE DATA IN ANGIOSPERM PHYLOGENETIC RECONSTRUCTION , 1988, Evolution; international journal of organic evolution.

[15]  J. Felsenstein Confidence Limits on Phylogenies With a Molecular Clock , 1985 .

[16]  R. Holmquist Transitions and transversions in evolutionary descent: An approach to understanding , 1983, Journal of Molecular Evolution.

[17]  R. DeSalle,et al.  Tempo and mode of sequence evolution in mitochondrial DNA of HawaiianDrosophila , 2005, Journal of Molecular Evolution.

[18]  T. A. Hall,et al.  BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .

[19]  M. Donoghue,et al.  Phylogenetic relationships of Dipsacales based on rbcl sequences , 1992 .