Recessive mutations in SLC38A8 cause foveal hypoplasia and optic nerve misrouting without albinism.

Foveal hypoplasia and optic nerve misrouting are developmental defects of the visual pathway and only co-occur in connection with albinism; to date, they have only been associated with defects in the melanin-biosynthesis pathway. Here, we report that these defects can occur independently of albinism in people with recessive mutations in the putative glutamine transporter gene SLC38A8. Nine different mutations were identified in seven Asian and European families. Using morpholino-mediated ablation of Slc38a8 in medaka fish, we confirmed that pigmentation is unaffected by loss of SLC38A8. Furthermore, by undertaking an association study with SNPs at the SLC38A8 locus, we showed that common variants within this gene modestly affect foveal thickness in the general population. This study reveals a melanin-independent component underpinning the development of the visual pathway that requires a functional role for SLC38A8.

[1]  J. Ohlsson,et al.  Subnormal visual acuity syndromes (SVAS): albinism in Swedish 12-13-year-old children , 2001, Documenta Ophthalmologica.

[2]  F. Abraham,et al.  Isolated foveal hypoplasia. , 1987, The British journal of ophthalmology.

[3]  M. V. Schiaffino Signaling pathways in melanosome biogenesis and pathology. , 2010, The international journal of biochemistry & cell biology.

[4]  G. Jeffery,et al.  Architecture of the optic chiasm and the mechanisms that sculpt its development. , 2001, Physiological reviews.

[5]  H. Zentgraf,et al.  Deletions and point mutations of LRRC50 cause primary ciliary dyskinesia due to dynein arm defects. , 2009, American journal of human genetics.

[6]  A. Moore,et al.  Clinical features of affected males with X linked ocular albinism. , 1993, The British journal of ophthalmology.

[7]  M. Michaelides,et al.  Developmental macular disorders: phenotypes and underlying molecular genetic basis , 2012, British Journal of Ophthalmology.

[8]  M. Mohamed,et al.  A new phenotype of recessively inherited foveal hypoplasia and anterior segment dysgenesis maps to a locus on chromosome 16q23.2–24.2. , 2004, Journal of Medical Genetics.

[9]  A. Shimada,et al.  Mutations in the gene encoding B, a novel transporter protein, reduce melanin content in medaka , 2001, Nature Genetics.

[10]  John Bradbury,et al.  A new recessively inherited disorder composed of foveal hypoplasia, optic nerve decussation defects and anterior segment dysgenesis maps to chromosome 16q23.3-24.1 , 2013, Molecular vision.

[11]  Ewan Birney,et al.  In Vivo Validation of a Computationally Predicted Conserved Ath5 Target Gene Set , 2007, PLoS genetics.

[12]  J. Eisen,et al.  Controlling morpholino experiments: don't stop making antisense , 2008, Development.

[13]  M. Tamai,et al.  X linked ocular albinism in Japanese patients. , 1995, The British journal of ophthalmology.

[14]  H. Schiöth,et al.  Evolutionary origin of amino acid transporter families SLC32, SLC36 and SLC38 and physiological, pathological and therapeutic aspects. , 2013, Molecular aspects of medicine.

[15]  A. Stratigos,et al.  A review of genetic disorders of hypopigmentation: lessons learned from the biology of melanocytes , 2009, Experimental dermatology.

[16]  R. Shetty,et al.  Gene Mapping in a Highly Inbred Consanguineous Foveal Hypoplasia Family to cytonenetic region 16q24.1 , 2011 .

[17]  R. Robb,et al.  Isolated foveal hypoplasia. , 1976, Archives of ophthalmology.

[18]  Manuel A. R. Ferreira,et al.  PLINK: a tool set for whole-genome association and population-based linkage analyses. , 2007, American journal of human genetics.

[19]  Carol A. Mason,et al.  Retinal axon growth at the optic chiasm: to cross or not to cross. , 2008, Annual review of neuroscience.

[20]  R. Fredriksson,et al.  Identification of SLC38A7 (SNAT7) Protein as a Glutamine Transporter Expressed in Neurons* , 2011, The Journal of Biological Chemistry.

[21]  C. Brenner,et al.  p53 Activation by Knockdown Technologies , 2007, PLoS genetics.

[22]  P. Bovolenta,et al.  miR-204 is required for lens and retinal development via Meis2 targeting , 2010, Proceedings of the National Academy of Sciences.

[23]  R. A. Pearson,et al.  Control of cell proliferation by neurotransmitters in the developing vertebrate retina , 2008, Brain Research.

[24]  B. Mackenzie,et al.  Sodium-coupled neutral amino acid (System N/A) transporters of the SLC38 gene family , 2004, Pflügers Archiv.

[25]  D. Reich,et al.  Principal components analysis corrects for stratification in genome-wide association studies , 2006, Nature Genetics.

[26]  T. Henrich,et al.  Mutations affecting retinotectal axonal pathfinding in Medaka, Oryzias latipes , 2004, Mechanisms of Development.

[27]  T. Iwamatsu Stages of normal development in the medaka Oryzias latipes , 1994, Mechanisms of Development.

[28]  F. Riemslag,et al.  Chiasmal misrouting and foveal hypoplasia without albinism , 2006, British Journal of Ophthalmology.

[29]  D. Mackey,et al.  Raine Eye Health Study: Design, Methodology and Baseline Prevalence of Ophthalmic Disease in a Birth-cohort Study of Young Adults , 2013, Ophthalmic genetics.

[30]  R. Shetty,et al.  Variable expressivity of ocular associations of foveal hypoplasia in a family , 2009, Eye.

[31]  A. Huberman,et al.  Pathway-Specific Genetic Attenuation of Glutamate Release Alters Select Features of Competition-Based Visual Circuit Refinement , 2011, Neuron.