A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
暂无分享,去创建一个
James K. Hane | R. Oliver | T. Friesen | S. Ellwood | Zhaohui Liu | R. Syme | Z. Lai | C. Moffat | F. Keiper | Zhibing Lai
[1] J. Walton. HC-toxin. , 2020, Phytochemistry.
[2] R. Oliver,et al. Genetic diversity and population structure of Ascochyta rabiei from the western Iranian Ilam and Kermanshah provinces using MAT and SSR markers , 2011, Mycological Progress.
[3] C. Cassa,et al. Automated validation of genetic variants from large databases: ensuring that variant references refer to the same genomic locations , 2011, Bioinform..
[4] L. Ciuffetti,et al. Host-selective toxins, Ptr ToxA and Ptr ToxB, as necrotrophic effectors in the Pyrenophora tritici-repentis-wheat interaction. , 2010, The New phytologist.
[5] J. Stajich,et al. De novo Assembly of a 40 Mb Eukaryotic Genome from Short Sequence Reads: Sordaria macrospora, a Model Organism for Fungal Morphogenesis , 2010, PLoS genetics.
[6] G. Murray,et al. Estimating disease losses to the Australian barley industry , 2010, Australasian Plant Pathology.
[7] B. Howlett,et al. Spot form of net blotch, caused by Pyrenophora teres f. maculata, is the most prevalent foliar disease of barley in Victoria, Australia , 2010, Australasian Plant Pathology.
[8] James K. Hane,et al. Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum , 2009, BMC Bioinformatics.
[9] Steven J. M. Jones,et al. Circos: an information aesthetic for comparative genomics. , 2009, Genome research.
[10] B. McDonald,et al. SnTox3 Acts in Effector Triggered Susceptibility to Induce Disease on Wheat Carrying the Snn3 Gene , 2009, PLoS pathogens.
[11] P. D. de Wit,et al. Fungal effector proteins. , 2009, Annual review of phytopathology.
[12] B. Howlett,et al. Epidemiology and control of spot form of net blotch (Pyrenophora teres f. maculata) of barley: a review , 2009 .
[13] N. Suzuki,et al. Cytological and electrophoretic karyotyping of the chestnut blight fungus Cryphonectria parasitica. , 2009, Fungal genetics and biology : FG & B.
[14] T. Friesen,et al. Host-selective toxins produced by Stagonospora nodorum confer disease susceptibility in adult wheat plants under field conditions , 2009, Theoretical and Applied Genetics.
[15] T. Friesen,et al. Development and characterization of expressed sequence tag-derived microsatellite markers for the wheat stem rust fungus Puccinia graminis f. sp. tritici. , 2009, Phytopathology.
[16] M. Borodovsky,et al. Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training. , 2008, Genome research.
[17] D. Catcheside,et al. Characterisation of low molecular weight phytotoxins isolated from Pyrenophora teres , 2008 .
[18] Nancy F. Hansen,et al. Accurate Whole Human Genome Sequencing using Reversible Terminator Chemistry , 2008, Nature.
[19] H. Wallwork,et al. Diagnostic microsatellite markers for the barley net blotch pathogens, Pyrenophora teres f. maculata and Pyrenophora teres f. teres , 2008, Australasian Plant Pathology.
[20] A. Waterman,et al. Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping , 2008, BMC Genomics.
[21] A. Kohler,et al. Fungi have three tetraspanin families with distinct functions , 2008, BMC Genomics.
[22] Mikihiro Yamamoto,et al. Expression profiles of genes encoded by the supernumerary chromosome controlling AM-toxin biosynthesis and pathogenicity in the apple pathotype of Alternaria alternata. , 2007, Molecular plant-microbe interactions : MPMI.
[23] James K. Hane,et al. Dothideomycete–Plant Interactions Illuminated by Genome Sequencing and EST Analysis of the Wheat Pathogen Stagonospora nodorum[W][OA] , 2007, The Plant Cell Online.
[24] G. Kema,et al. Electrophoretic and cytological karyotyping of the foliar wheat pathogen Mycosphaerella graminicola reveals many chromosomes with a large size range. , 2007, Mycologia.
[25] D. Catcheside,et al. Proteinaceous Metabolites from Pyrenophora teres Contribute to Symptom Development of Barley Net Blotch. , 2007, Phytopathology.
[26] T. Friesen,et al. The Stagonospora nodorum-wheat pathosystem involves multiple proteinaceous host-selective toxins and corresponding host sensitivity genes that interact in an inverse gene-for-gene manner. , 2007, The Plant journal : for cell and molecular biology.
[27] T. Friesen,et al. Genetic mapping of Pyrenophora teres f. teres genes conferring avirulence on barley. , 2007, Fungal genetics and biology : FG & B.
[28] R. Papa,et al. Phylogeny and evolution of mating-type genes from Pyrenophora teres, the causal agent of barley “net blotch” disease , 2007, Current Genetics.
[29] Locating proteins in the cell using TargetP, SignalP and related tools , 2007, Nature Protocols.
[30] S. Brunak,et al. Locating proteins in the cell using TargetP, SignalP and related tools , 2007, Nature Protocols.
[31] A. J. Foster,et al. Ferricrocin synthesis in Magnaporthe grisea and its role in pathogenicity in rice. , 2007, Molecular plant pathology.
[32] Hua Ling,et al. Emergence of a new disease as a result of interspecific virulence gene transfer , 2006, Nature Genetics.
[33] Feng Chen,et al. OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups , 2005, Nucleic Acids Res..
[34] P. Horton,et al. PROTEIN SUBCELLULAR LOCALIZATION PREDICTION WITH WOLF PSORT , 2005 .
[35] T. Friesen,et al. A wheat intervarietal genetic linkage map based on microsatellite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci , 2005, Theoretical and Applied Genetics.
[36] Cathryn J. Rehmeyer,et al. The genome sequence of the rice blast fungus Magnaporthe grisea , 2005, Nature.
[37] J. Ovesná,et al. AFLP-based PCR markers that differentiate spot and net forms of Pyrenophora teres , 2005 .
[38] G. Kema,et al. A combined amplified fragment length polymorphism and randomly amplified polymorphism DNA genetic kinkage map of Mycosphaerella graminicola, the septoria tritici leaf blotch pathogen of wheat. , 2002, Genetics.
[39] L. Ciuffetti,et al. A molecular genetic map and electrophoretic karyotype of the plant pathogenic fungus Cochliobolus sativus. , 2002, Molecular plant-microbe interactions : MPMI.
[40] P. Crous,et al. Evidence of recombination between net- and spot-type populations of Pyrenophora teres as determined by RAPD analysis , 2002 .
[41] H. Giese,et al. A genetic map of Blumeria graminis based on functional genes, avirulence genes, and molecular markers. , 2002, Fungal genetics and biology : FG & B.
[42] R. Müller,et al. Multiple hybrid polyketide synthase/non-ribosomal peptide synthetase gene clusters in the myxobacterium Stigmatella aurantiaca. , 2001, Gene.
[43] B. Howlett,et al. Pathogenicity genes of phytopathogenic fungi. , 2001, Molecular plant pathology.
[44] L. Francl,et al. Characterization of the ToxB gene from Pyrenophora tritici-repentis. , 2001, Molecular plant-microbe interactions : MPMI.
[45] M. Daub,et al. The Photoactivated Cercospora Toxin Cercosporin: Contributions to Plant Disease and Fundamental Biology. , 2000, Annual review of phytopathology.
[46] Y. Itoh,et al. Cloning and characterization of a cyclic peptide synthetase gene from Alternaria alternata apple pathotype whose product is involved in AM-toxin synthesis and pathogenicity. , 2000, Molecular plant-microbe interactions : MPMI.
[47] M. Aragona,et al. Electrophoretic karyotypes of the phytopathogenic Pyrenophora graminea and P. teres , 2000 .
[48] H. Schoonbeek,et al. Fungal transporters involved in efflux of natural toxic compounds and fungicides. , 2000, Fungal genetics and biology : FG & B.
[49] H. Vanetten,et al. Visualization of a conditionally dispensable chromosome in the filamentous ascomycete Nectria haematococca by fluorescence in situ hybridization. , 1999, Fungal genetics and biology : FG & B.
[50] J. Weiland,et al. Identification of Molecular Genetic Markers in Pyrenophora teres f. teres Associated with Low Virulence on 'Harbin' Barley. , 1999, Phytopathology.
[51] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[52] M. Farman,et al. Genome organization of Magnaporthe grisea: integration of genetic maps, clustering of transposable elements and identification of genome duplications and rearrangements , 1997, Theoretical and Applied Genetics.
[53] J. Nelson. QGENE: software for marker-based genomic analysis and breeding , 1997, Molecular Breeding.
[54] S. Christiansen,et al. Efficient cloning of ascomycete mating type genes by PCR amplification of the conserved MAT HMG Box. , 1997, Fungal genetics and biology : FG & B.
[55] J. Walton,et al. Host-selective toxins: agents of compatibility. , 1996, The Plant cell.
[56] S. Covert,et al. A gene for maackiain detoxification from a dispensable chromosome ofNectria haematococca , 1996, Molecular and General Genetics MGG.
[57] H. Vanetten,et al. A gene from the fungal plant pathogen Nectria haematococca that encodes the phytoalexin-detoxifying enzyme pisatin demethylase defines a new cytochrome P450 family , 1994, Molecular and General Genetics MGG.
[58] N. Talbot,et al. Karyotypic Variation within Clonal Lineages of the Rice Blast Fungus, Magnaporthe grisea , 1993, Applied and environmental microbiology.
[59] S. Covert,et al. A fungal gene for antibiotic resistance on a dispensable ("B") chromosome. , 1991, Science.
[60] A. Tekauz. Characterization and distribution of pathogenic variation in Pyrenophora teres f. teres and P. teres f. maculata from western Canada , 1990 .
[61] M. Daly,et al. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. , 1987, Genomics.
[62] H H Flor,et al. Current Status of the Gene-For-Gene Concept , 1971 .
[63] R. Oliver,et al. Pyrenophora teres: profile of an increasingly damaging barley pathogen. , 2011, Molecular plant pathology.
[64] D. Catcheside,et al. Initial characterisation of phytotoxic proteins isolated from Pyrenophora teres , 2008 .
[65] Claude-Alain H. Roten,et al. Theoretical and practical advances in genome halving , 2004 .
[66] R. Voorrips. MapChart: software for the graphical presentation of linkage maps and QTLs. , 2002, The Journal of heredity.
[67] C. Lottaz,et al. BIOINFORMATICS APPLICATIONS NOTE , 2001 .
[68] S Rozen,et al. Primer3 on the WWW for general users and for biologist programmers. , 2000, Methods in molecular biology.
[69] G. Benson,et al. Tandem repeats finder: a program to analyze DNA sequences. , 1999, Nucleic acids research.
[70] Sean R. Eddy,et al. HMMER User's Guide - Biological sequence analysis using profile hidden Markov models , 1998 .
[71] Donald E. Mathre,et al. Compendium of barley diseases , 1997 .
[72] L. Ciuffetti,et al. Purification and immunological characterization of toxic components from cultures of Pyrenophora tritici-repentis. , 1995, Molecular plant-microbe interactions : MPMI.
[73] P. Vos,et al. AFLP: a new technique for DNA fingerprinting. , 1995, Nucleic acids research.
[74] B. Steffenson,et al. Pathotype diversity of Pyrrenophora teres f.teres on barley , 1992 .
[75] Steven J. M. Jones,et al. Abyss: a Parallel Assembler for Short Read Sequence Data Material Supplemental Open Access , 2022 .
[76] Shivashankar H. Nagaraj,et al. University of Birmingham High throughput functional annotation and data mining with the Blast2GO suite , 2022 .
[77] Christina A. Cuomo,et al. Source (or Part of the following Source): Type Article Title Comparative Genomics Reveals Mobile Pathogenicity Chromosomes in Fusarium Author(s) , 2022 .
[78] R. Dean,et al. Bmc Evolutionary Biology the Evolutionary History of Cytochrome P450 Genes in Four Filamentous Ascomycetes , 2022 .