Suppression of the SWI/SNF Component Arid1a Promotes Mammalian Regeneration.

[1]  Kathleen R. Cho,et al.  Arid1a inactivation in an Apc‐ and Pten‐defective mouse ovarian cancer model enhances epithelial differentiation and prolongs survival , 2016, The Journal of pathology.

[2]  Jonathan H. Dennis,et al.  BAF250a Protein Regulates Nucleosome Occupancy and Histone Modifications in Priming Embryonic Stem Cell Differentiation* , 2015, The Journal of Biological Chemistry.

[3]  L. Timchenko,et al.  Cooperation of C/EBP family proteins and chromatin remodeling proteins is essential for termination of liver regeneration , 2015, Hepatology.

[4]  Jeffrey S. Damrauer,et al.  Coexistent ARID1A-PIK3CA mutations promote ovarian clear-cell tumorigenesis through pro-tumorigenic inflammatory cytokine signaling , 2014, Nature Communications.

[5]  Christophe Romier,et al.  TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation , 2014, eLife.

[6]  Zhidong Tu,et al.  Baf250a orchestrates an epigenetic pathway to repress the Nkx2.5-directed contractile cardiomyocyte program in the sinoatrial node , 2014, Cell Research.

[7]  I. Shih,et al.  Roles of deletion of Arid1a, a tumor suppressor, in mouse ovarian tumorigenesis. , 2014, Journal of the National Cancer Institute.

[8]  Richard T. Lee,et al.  Restoring Systemic GDF11 Levels Reverses Age-Related Dysfunction in Mouse Skeletal Muscle , 2014, Science.

[9]  W. Hahn,et al.  ARID1B is a specific vulnerability in ARID1A-mutant cancers , 2014, Nature Medicine.

[10]  G. Daley,et al.  Lin28 Enhances Tissue Repair by Reprogramming Cellular Metabolism , 2013, Cell.

[11]  Swe Swe Myint,et al.  Exome sequencing identifies distinct mutational patterns in liver fluke–related and non-infection-related bile duct cancers , 2013, Nature Genetics.

[12]  T. Pawlik,et al.  Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas , 2013, Nature Genetics.

[13]  G. Crabtree,et al.  mSWI/SNF (BAF) Complexes Facilitate Decatentation of DNA by Topoisomerase IIα , 2013, Nature.

[14]  G. Crabtree,et al.  Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy , 2013, Nature Genetics.

[15]  J. Brennan,et al.  ARID1a-DNA Interactions Are Required for Promoter Occupancy by SWI/SNF , 2012, Molecular and Cellular Biology.

[16]  Jacob R. Goheen,et al.  Skin shedding and tissue regeneration in African spiny mice (Acomys) , 2012, Nature.

[17]  Boping Zhou,et al.  Exome sequencing of hepatitis B virus–associated hepatocellular carcinoma , 2012, Nature Genetics.

[18]  Satoko Arakawa,et al.  Hypertrophy and Unconventional Cell Division of Hepatocytes Underlie Liver Regeneration , 2012, Current Biology.

[19]  Keith A. Boroevich,et al.  Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators , 2012, Nature Genetics.

[20]  S. Imbeaud,et al.  Integrated analysis of somatic mutations and focal copy-number changes identifies key genes and pathways in hepatocellular carcinoma , 2012, Nature Genetics.

[21]  Steven L Salzberg,et al.  Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.

[22]  Eric S. Lander,et al.  Chromatin modifying enzymes as modulators of reprogramming , 2012, Nature.

[23]  I. Ellis,et al.  Differential oestrogen receptor binding is associated with clinical outcome in breast cancer , 2011, Nature.

[24]  P. Reddien,et al.  The cellular basis for animal regeneration. , 2011, Developmental cell.

[25]  G. Crabtree,et al.  ATP-dependent chromatin remodeling: genetics, genomics and mechanisms , 2011, Cell Research.

[26]  K. Poss,et al.  Advances in understanding tissue regenerative capacity and mechanisms in animals , 2010, Nature Reviews Genetics.

[27]  Julien Sage,et al.  Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian muscle. , 2010, Cell stem cell.

[28]  J. Rinn,et al.  Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies , 2010, Nature Genetics.

[29]  C. Glass,et al.  Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. , 2010, Molecular cell.

[30]  Tomohiro Kono,et al.  Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells , 2010, Nature.

[31]  Clifford A. Meyer,et al.  Model-based Analysis of ChIP-Seq (MACS) , 2008, Genome Biology.

[32]  D. Felsher,et al.  Hepatotoxin-Induced Changes in the Adult Murine Liver Promote MYC-Induced Tumorigenesis , 2008, PloS one.

[33]  R. Tjian,et al.  ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a , 2008, Proceedings of the National Academy of Sciences.

[34]  Detlef Schuppan,et al.  Liver cirrhosis , 2008, The Lancet.

[35]  Xiaomei Wang,et al.  Distinct mammalian SWI/SNF chromatin remodeling complexes with opposing roles in cell‐cycle control , 2007, The EMBO journal.

[36]  S. Iijima,et al.  Mammalian chromatin remodeling complex SWI/SNF is essential for enhanced expression of the albumin gene during liver development. , 2006, Journal of biochemistry.

[37]  Pablo Tamayo,et al.  Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[38]  I. Weissman,et al.  Rejuvenation of aged progenitor cells by exposure to a young systemic environment , 2005, Nature.

[39]  M. Daly,et al.  PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes , 2003, Nature Genetics.

[40]  S. Awad,et al.  Aging Reduces Proliferative Capacities of Liver by Switching Pathways of C/EBPα Growth Arrest , 2003, Cell.

[41]  J. Albrecht,et al.  C/EBPα triggers proteasome‐dependent degradation of cdk4 during growth arrest , 2002 .

[42]  Triona Goode,et al.  C/EBPα Arrests Cell Proliferation through Direct Inhibition of Cdk2 and Cdk4 , 2001 .

[43]  M. Nakanishi,et al.  CCAAT/Enhancer-binding Protein-α Cooperates with p21 to Inhibit Cyclin-dependent Kinase-2 Activity and Induces Growth Arrest Independent of DNA Binding* , 2001, The Journal of Biological Chemistry.

[44]  E. Heber-Katz,et al.  The regenerating mouse ear. , 1999, Seminars in cell & developmental biology.

[45]  E. Blankenhorn,et al.  Genetic analysis of a mammalian wound-healing trait. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[46]  N. Bucher,et al.  THE INFLUENCE OF AGE UPON THE INCORPORATION OF THYMIDINE-2-C14 INTO THE DNA OF REGENERATING RAT LIVER. , 1964, Cancer research.

[47]  S. Dupont,et al.  Transcriptomic and proteomic analyses of Amphiura filiformis arm tissue-undergoing regeneration. , 2015, Journal of proteomics.

[48]  G. Michalopoulos Liver regeneration after partial hepatectomy: critical analysis of mechanistic dilemmas. , 2010, The American journal of pathology.

[49]  H. Willenbring,et al.  A reproducible and well-tolerated method for 2/3 partial hepatectomy in mice , 2008, Nature Protocols.

[50]  J. Albrecht,et al.  C/EBPalpha triggers proteasome-dependent degradation of cdk4 during growth arrest. , 2002, The EMBO journal.

[51]  A. Welm,et al.  C/EBPalpha arrests cell proliferation through direct inhibition of Cdk2 and Cdk4. , 2001, Molecular cell.