Three dimension optical imaging in a high throughput layered expression system.

Layered peptide array (LPA) system enables multiplex screening of biomarkers [1-3]. One of the main problems of the LPA system is the screening of the layered-membranes stack. Nowadays, each membrane is imaged separately using conventional fluorescent imaging. This process is time consuming and requires extensive manual interaction. This paper describes a general solution for optical imaging of a layered grid medium using photogrammetric methods. The suggested method enables visualization of the LPA membranes stack by using only two images of the stack. This study is a proof of concept of the suggested solution using MATLAB simulation and phantom experiments.

[1]  Stephen J. Lomnes,et al.  Tissue-like phantoms for near-infrared fluorescence imaging system assessment and the training of surgeons. , 2006, Journal of biomedical optics.

[2]  Armin Gruen,et al.  Particle tracking velocimetry in three-dimensional flows , 1993, Experiments in Fluids.

[3]  Heidi S Erickson,et al.  Layered peptide arrays: high-throughput antibody screening of clinical samples. , 2005, The Journal of molecular diagnostics : JMD.

[4]  Gallya Gannot,et al.  Layered expression scanning: multiplex molecular analysis of diverse life science platforms. , 2007, Clinica chimica acta; international journal of clinical chemistry.

[5]  J. MacQueen Some methods for classification and analysis of multivariate observations , 1967 .

[6]  Stuart N. Lane,et al.  REMOTE SENSING OF CLEAR-WATER, SHALLOW, GRAVEL-BED RIVERS USING DIGITAL PHOTOGRAMMETRY , 2001 .

[7]  G. Zack,et al.  Automatic measurement of sister chromatid exchange frequency. , 1977, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[8]  A. Verri,et al.  A compact algorithm for rectification of stereo pairs , 2000 .

[9]  Paul L. Rosin Unimodal thresholding , 2001, Pattern Recognit..

[10]  Luc Vincent,et al.  Morphological grayscale reconstruction in image analysis: applications and efficient algorithms , 1993, IEEE Trans. Image Process..

[11]  Janne Heikkilä,et al.  A four-step camera calibration procedure with implicit image correction , 1997, Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

[12]  Heidi S Erickson,et al.  Layered peptide array for multiplex immunohistochemistry. , 2007, The Journal of molecular diagnostics : JMD.

[13]  Pierre Machart Morphological Segmentation , 2009 .

[14]  H. L. Mitchell,et al.  Medical photogrammetric measurement: overview and prospects , 2002 .