A customized nonlocal restoration schemes with adaptive strength of smoothening for magnetic resonance images

Abstract Background Nonlocal Means (NLM) filter is a nonlinear filter exclusively suitable for images comprising redundant patterns at spatially distinct locations, like Magnetic Resonance (MR) images. However, its performance heavily depends on the selection of one of its arbitrary operational parameters termed as smoothening strength (ξ). Improper selection of ξ may lead to over-blurring or partial denoising. Objectives An image adaptive algorithm, to determine the optimum value of ξ, meant for customizing the NLM for MR images is proposed. Methods In the proposed scheme for initializing ξ, its value is increased in proportion to the standard deviation of noise σ ^ n , according to a linear model ξ=β σ ^ n . The optimum value of the arbitrary parameter β is identified through an iterative search, using a composite metric termed as Optimum Denoising Index (ODI), which objectively accounts for the noise suppression and edge preservation capability of the filter, as target function. Assuming the noise to be Gaussian distributed with zero mean, its standard deviation is computed using a ‘difference of Laplacian’ kernel. Results The techniques available in literature for the selection of β are (i) Coupe’s model with β derived out of minimum error sense, (ii) simple linear model ξ=βσ with empirically decided value β = 10 and global optimum of β modified locally in proportion to either (iii) local noise statistics or (iv) edge strength. ODI exhibited by the above techniques and the proposed iterative search are 0.3145 ± 0.0347, 0.2509 ± 0.0149, 0.1210 ± 0.0143, 0.1790 ± 0.0511 and 0.3678 ± 0.0022, respectively. Peak Signal to Noise Ratio (PSNR) between the denoised and the noise-free ground truth images exhibited by Kuwahara Filter, Total Variation (TV) Filter, Anisotropic Diffusion (AD) Filter, Bilateral Filter, SUSAN Filter and the proposed NLM Filter are 21.8739 ± 4.7310, 20.9596 ± 5.0518, 22.1553 ± 5.3369, 22.2142 ± 5.1275, 28.5628 ± 0.02 and 28.9967 ± 0.13, on 30 standard images. Conclusion The iterative search is superior to methods available in literature with regard to the sharpness of the true morphological edges and smoothness of the homogenous regions in the denoised image. The proposed scheme of NLM is found to be superior to Kuwahara, TV, AD, Bilateral and SUSAN Filters.

[1]  Dimitri Van De Ville,et al.  Nonlocal Means With Dimensionality Reduction and SURE-Based Parameter Selection , 2011, IEEE Transactions on Image Processing.

[2]  Mingyue Ding,et al.  SUSAN controlled decay parameter adaption for non-local means image denoising , 2013 .

[3]  Bo Li,et al.  Multifocus image fusion via fixed window technique of multiscale images and non-local means filtering , 2017, Signal Process..

[4]  Cornel Zachiu,et al.  An Adaptive Non-Local-Means Filter for Real-Time MR-Thermometry , 2017, IEEE Transactions on Medical Imaging.

[6]  Jean-Michel Morel,et al.  A non-local algorithm for image denoising , 2005, 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05).

[7]  Saime Akdemir Akar,et al.  Determination of optimal parameters for bilateral filter in brain MR image denoising , 2016, Appl. Soft Comput..

[8]  Justin Joseph,et al.  Noise Based Computation of Decay Control Parameter in Nonlocal Means Filter for MRI Restoration , 2016 .

[9]  Ming Zhang,et al.  Multiresolution Bilateral Filtering for Image Denoising , 2008, IEEE Transactions on Image Processing.

[10]  Justin Joseph,et al.  An analytical method for the adaptive computation of threshold of gradient modulus in 2D anisotropic diffusion filter , 2017 .

[11]  Se Young Chun,et al.  Bounded Self-Weights Estimation Method for Non-Local Means Image Denoising Using Minimax Estimators , 2017, IEEE Transactions on Image Processing.

[12]  Dinggang Shen,et al.  Denoising magnetic resonance images using collaborative non-local means , 2016, Neurocomputing.

[13]  Yiming Tang,et al.  A new metric for measuring structure-preserving capability of despeckling of SAR images , 2014 .

[14]  Justin Joseph,et al.  A full reference Morphological Edge Similarity Index to account processing induced edge artefacts in magnetic resonance images , 2017 .

[15]  Justin Joseph,et al.  A fully customized enhancement scheme for controlling brightness error and contrast in magnetic resonance images , 2018, Biomed. Signal Process. Control..

[16]  Dimitri Van De Ville,et al.  SURE-Based Non-Local Means , 2009, IEEE Signal Processing Letters.

[17]  Ajay Gupta,et al.  Speckle reduction in medical ultrasound images using an unbiased non-local means method , 2016, Biomed. Signal Process. Control..

[18]  Enmin Song,et al.  Denoising 3D MR images by the enhanced non-local means filter for Rician noise. , 2010, Magnetic resonance imaging.

[19]  Göran Salomonsson,et al.  Image enhancement based on a nonlinear multiscale method , 1997, IEEE Trans. Image Process..

[20]  José V. Manjón,et al.  MRI denoising using Non-Local Means , 2008, Medical Image Anal..

[21]  John Immerkær,et al.  Fast Noise Variance Estimation , 1996, Comput. Vis. Image Underst..

[22]  Linghong Zhou,et al.  Iterative image reconstruction using modified non-local means filtering for limited-angle computed tomography. , 2016, Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics.

[23]  Krzysztof Bartyzel,et al.  Adaptive Kuwahara filter , 2016, Signal Image Video Process..

[24]  Pierrick Coupé,et al.  An Optimized Blockwise Nonlocal Means Denoising Filter for 3-D Magnetic Resonance Images , 2008, IEEE Transactions on Medical Imaging.

[25]  Lishan Qiao,et al.  A general non-local denoising model using multi-kernel-induced measures , 2014, Pattern Recognit..

[26]  Jun Zhou,et al.  Adaptive non-local means filtering for image deblocking , 2011, 2011 4th International Congress on Image and Signal Processing.

[27]  Danni Ai,et al.  Local statistics and non-local mean filter for speckle noise reduction in medical ultrasound image , 2016, Neurocomputing.

[28]  Stuart Crozier,et al.  Denoising of Dynamic Contrast-Enhanced MR Images Using Dynamic Nonlocal Means , 2010, IEEE Transactions on Medical Imaging.

[29]  Stephen M. Smith,et al.  SUSAN—A New Approach to Low Level Image Processing , 1997, International Journal of Computer Vision.

[30]  Damiana Lazzaro,et al.  An Iterative $L_{1}$-Based Image Restoration Algorithm With an Adaptive Parameter Estimation , 2012, IEEE Transactions on Image Processing.

[31]  Justin Joseph,et al.  An Edge Preservation Index for Evaluating Nonlinear Spatial Restoration in MR Images , 2017 .

[32]  Dongrong Xu,et al.  Evaluation of Non-Local Means Based Denoising Filters for Diffusion Kurtosis Imaging Using a New Phantom , 2015, PloS one.

[33]  Danni Ai,et al.  Brain MR image denoising for Rician noise using pre-smooth non-local means filter , 2015, Biomedical engineering online.

[34]  Xiangchu Feng,et al.  Edge Strength Similarity for Image Quality Assessment , 2013, IEEE Signal Processing Letters.

[35]  Pierrick Coupé,et al.  Author manuscript, published in "Journal of Magnetic Resonance Imaging 2010;31(1):192-203" DOI: 10.1002/jmri.22003 Adaptive Non-Local Means Denoising of MR Images with Spatially Varying Noise Levels , 2010 .

[36]  Russell C. Hardie,et al.  Recursive non-local means filter for video denoising , 2017, 2016 IEEE National Aerospace and Electronics Conference (NAECON) and Ohio Innovation Summit (OIS).

[37]  Byungcheol Kang,et al.  Noise reduction in magnetic resonance images using adaptive non-local means filtering , 2013 .