Sustaining the development of cyberinfrastructure: an organization adapting to change

Cyberinfrastructures are virtual organizations comprised of people and large-scale scientific computational infrastructures. Cyberinfrastructures endeavor to support "cutting-edge" science and must continually evolve and be under development in order to maintain their relevance and usefulness. This qualitative study of a cyberinfrastructure development project to support the new science of metagenomics investigates how sustaining cyberinfrastructure entails continually realigning the relationships among people, technologies, and organizations.

[1]  Pamela J. Hinds,et al.  Managing Distance over Time: The Evolution of Technologies of Dis/Ambiguation , 2002 .

[2]  Karen Ruhleder,et al.  Steps Toward an Ecology of Infrastructure: Design and Access for Large Information Spaces , 1996, Inf. Syst. Res..

[3]  Thomas A. Finholt,et al.  The Long Now of Technology Infrastructure: Articulating Tensions in Development , 2009, J. Assoc. Inf. Syst..

[4]  C. Lynch Big data: How do your data grow? , 2008, Nature.

[5]  J. Simpson,et al.  The Oxford English Dictionary , 1884 .

[6]  David Ribes,et al.  Sociotechnical Studies of Cyberinfrastructure and e-Research: Current Themes and Future Trajectories , 2010, Computer Supported Cooperative Work (CSCW).

[7]  Chris F. Taylor,et al.  The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.

[8]  L. Fulton,et al.  Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. , 2008, Cell host & microbe.

[9]  Helena Karasti,et al.  Infrastructuring for the long-term: ecological information management , 2004 .

[10]  Charlotte P. Lee,et al.  Synergizing in Cyberinfrastructure Development , 2010, Computer Supported Cooperative Work (CSCW).

[11]  James D. Myers,et al.  Semantic middleware for e‐Science knowledge spaces , 2011, Concurr. Comput. Pract. Exp..

[12]  R. Knight,et al.  The Human Microbiome Project , 2007, Nature.

[13]  Paul Dourish,et al.  The human infrastructure of cyberinfrastructure , 2006, CSCW '06.

[14]  Carla Simone,et al.  Coordination mechanisms: Towards a conceptual foundation of CSCW systems design , 1996, Computer Supported Cooperative Work (CSCW).

[15]  Edward A. Lee,et al.  Scientific workflow management and the Kepler system , 2006, Concurr. Comput. Pract. Exp..

[16]  E. Aronova,et al.  Big Science and Big Data in Biology: From the International Geophysical Year through the International Biological Program to the Long Term Ecological Research (LTER) Network, 1957––Present , 2010 .

[17]  Matthew J. Bietz,et al.  Collaboration in metagenomics , 2009 .

[18]  Jillian F. Banfield,et al.  Community genomics in microbial ecology and evolution , 2005, Nature Reviews Microbiology.

[19]  A. Strauss,et al.  The discovery of grounded theory: strategies for qualitative research aldine de gruyter , 1968 .

[20]  Ann Zimmerman,et al.  DataNet: An emerging cyberinfrastructure for sharing, reusing and preserving digital data for scientific discovery and learning , 2009 .

[21]  N. Hoffart Basics of Qualitative Research: Techniques and Procedures for Developing Grounded Theory , 2000 .

[22]  Christopher J. Mackie Cyberinfrastructure, institutions and sustainability , 2007, First Monday.

[23]  Marlon Pierce,et al.  Cyberinfrastructure Software Sustainability and Reusability: Report from an NSF-funded workshop held 27 & 28 March 2009 , 2010 .

[24]  Daniel Atkins,et al.  Revolutionizing Science and Engineering Through Cyberinfrastructure: Report of the National Science Foundation Blue-Ribbon Advisory Panel on Cyberinfrastructure , 2003 .

[25]  Charlotte P. Lee,et al.  Collaboration in Metagenomics: Sequence Databases and the Organization of Scientific Work , 2009, ECSCW.

[26]  Jennifer M. Schopf Sustainability and the Office of CyberInfrastructure , 2009, 2009 Eighth IEEE International Symposium on Network Computing and Applications.

[27]  S. L. Star,et al.  The Ethnography of Infrastructure , 1999 .

[28]  S. L. Star,et al.  How to Infrastructure , 2002 .

[29]  Elihu M. Gerson,et al.  Reach, Bracket, and the Limits of Rationalized Coordination: Some Challenges for CSCW , 2008, Theory in CSCW.

[30]  Anselm L. Strauss,et al.  Basics of qualitative research : techniques and procedures for developing grounded theory , 1998 .