Hypoxia and Human Genome Stability: Downregulation of BRCA2 Expression in Breast Cancer Cell Lines

Previously, it has been reported that hypoxia causes increased mutagenesis and alteration in DNA repair mechanisms. In 2005, an interesting study showed that hypoxia-induced decreases in BRCA1 expression and the consequent suppression of homologous recombination may lead to genetic instability. However, nothing is yet known about the involvement of BRCA2 in hypoxic conditions in breast cancer. Initially, a cell proliferation assay allowed us to hypothesize that hypoxia could negatively regulate the breast cancer cell growth in short term in vitro studies. Subsequently, we analyzed gene expression in breast cancer cell lines exposed to hypoxic condition by microarray analysis. Interestingly, genes involved in DNA damage repair pathways such as mismatch repair, nucleotide excision repair, nonhomologous end-joining and homologous recombination repair were downregulated. In particular, we focused on the BRCA2 downregulation which was confirmed at mRNA and protein level. In addition, breast cancer cells were treated with dimethyloxalylglycine (DMOG), a cell-permeable inhibitor of both proline and asparaginyl hydroxylases able to induce HIF-1α stabilization in normoxia, providing results comparable to those previously described. These findings may provide new insights into the mechanisms underlying genetic instability mediated by hypoxia and BRCA involvement in sporadic breast cancers.

[1]  Benjamin M. Bolstad,et al.  affy - analysis of Affymetrix GeneChip data at the probe level , 2004, Bioinform..

[2]  G. Semenza,et al.  Hypoxia, Clonal Selection, and the Role of HIF-1 in Tumor Progression , 2000, Critical reviews in biochemistry and molecular biology.

[3]  Y. Benjamini,et al.  Controlling the false discovery rate in behavior genetics research , 2001, Behavioural Brain Research.

[4]  A. Harris,et al.  HIF-1α Induces Genetic Instability by Transcriptionally Downregulating MutSα Expression , 2005 .

[5]  Montserrat Garcia-Closas,et al.  Genetic susceptibility to breast cancer , 2010, Molecular oncology.

[6]  B. Karlan,et al.  Localization of human BRCA1 and its loss in high-grade, non-inherited breast carcinomas , 1999, Nature Genetics.

[7]  A. Jemal,et al.  Breast Cancer Statistics , 2013 .

[8]  R. Bristow,et al.  Hypoxia down-regulates DNA double strand break repair gene expression in prostate cancer cells. , 2005, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[9]  Masahiro Hiraoka,et al.  Microenvironment and Radiation Therapy , 2012, BioMed research international.

[10]  F. Toledo,et al.  A new role for hypoxia in tumor progression: induction of fragile site triggering genomic rearrangements and formation of complex DMs and HSRs. , 1998, Molecular cell.

[11]  P. Groep,et al.  High frequency of HIF-1α overexpression in BRCA1 related breast cancer , 2008, Breast Cancer Research and Treatment.

[12]  M. Neeman,et al.  Hypoxic stress and cancer: imaging the axis of evil in tumor metastasis , 2011, NMR in biomedicine.

[13]  J. Gabert,et al.  Hypoxia-inducible factor-1α as prognostic marker. , 2013, Expert opinion on medical diagnostics.

[14]  R. Bristow,et al.  Defective DNA Strand Break Repair after DNA Damage in Prostate Cancer Cells , 2004, Cancer Research.

[15]  Y. Pommier,et al.  Homologous recombination is the principal pathway for the repair of DNA damage induced by tirapazamine in mammalian cells. , 2008, Cancer research.

[16]  J. Jónasson,et al.  Epigenetic silencing and deletion of the BRCA1 gene in sporadic breast cancer , 2006, Breast Cancer Research.

[17]  R. Hill,et al.  Hypoxia and Metastasis , 2007, Clinical Cancer Research.

[18]  A. Giaccia,et al.  ATR/ATM Targets Are Phosphorylated by ATR in Response to Hypoxia and ATM in Response to Reoxygenation* , 2003, The Journal of Biological Chemistry.

[19]  Hiroyuki Ogata,et al.  KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..

[20]  A. Giordano,et al.  R-Roscovitine (Seliciclib) prevents DNA damage-induced cyclin A1 upregulation and hinders non-homologous end-joining (NHEJ) DNA repair , 2010, Molecular Cancer.

[21]  Peter Vaupel,et al.  The role of hypoxia-induced factors in tumor progression. , 2004, The oncologist.

[22]  P. Glazer,et al.  Genetic instability and the tumor microenvironment: towards the concept of microenvironment-induced mutagenesis. , 2005, Mutation research.

[23]  Lin Guo-yuan Molecular responses to hypoxia in tumor cells , 2006 .

[24]  M. Moynahan,et al.  BRCA Gene Structure and Function in Tumor Suppression: A Repair-Centric Perspective , 2010, Cancer journal.

[25]  D. Brizel,et al.  Prognostic value of tumor oxygenation in 397 head and neck tumors after primary radiation therapy. An international multi-center study. , 2005, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[26]  H. Burris,et al.  Dual kinase inhibition in the treatment of breast cancer: initial experience with the EGFR/ErbB-2 inhibitor lapatinib. , 2004, The oncologist.

[27]  Manfred Kunz,et al.  Molecular responses to hypoxia in tumor cells , 2003, Molecular Cancer.

[28]  Simon Lord,et al.  Gene expression and hypoxia in breast cancer , 2011, Genome Medicine.

[29]  Gordon K Smyth,et al.  Statistical Applications in Genetics and Molecular Biology Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments , 2011 .

[30]  Ahmedin Jemal,et al.  Breast cancer statistics, 2011 , 2011, CA: a cancer journal for clinicians.

[31]  G. Semenza Cancer–stromal cell interactions mediated by hypoxia-inducible factors promote angiogenesis, lymphangiogenesis, and metastasis , 2013, Oncogene.

[32]  Helen H. W. Chen,et al.  Hypoxia-inducible factor-1α correlates with MET and metastasis in node-negative breast cancer , 2007, Breast Cancer Research and Treatment.

[33]  P. Glazer,et al.  Genetic instability induced by the tumor microenvironment. , 1996, Cancer research.

[34]  R. Bristow,et al.  Hypoxia-induced down-regulation of BRCA1 expression by E2Fs. , 2005, Cancer research.

[35]  Florentia Fostira,et al.  Hereditary Breast Cancer: The Era of New Susceptibility Genes , 2013, BioMed research international.

[36]  Gordon K. Smyth,et al.  affylmGUI: a graphical user interface for linear modeling of single channel microarray data , 2006, Bioinform..

[37]  M. Jasin Homologous repair of DNA damage and tumorigenesis:the BRCA connection , 2002, Oncogene.

[38]  Christophe Picard,et al.  Hypoxia inducible factor 1α gene (HIF-1α) splice variants: potential prognostic biomarkers in breast cancer , 2010, BMC medicine.

[39]  Rafael A Irizarry,et al.  Exploration, normalization, and summaries of high density oligonucleotide array probe level data. , 2003, Biostatistics.

[40]  R. Bristow,et al.  Tumor hypoxia, DNA repair and prostate cancer progression: new targets and new therapies. , 2007, Future oncology.