Generalized Beta Regression to Elicit Conditional Distributions of Medical Variables

Univariate conditional models are of core importance in supporting medical reasoning, as they allow to decompose a joint probability distribution using the chain rule. Although several methods are available for the elicitation of the joint prior distribution of parameters when the response is a medical categorical variable, the case of a medical continuous response is typically difficult to address, because its sample space is often bounded to an interval and its relationship with explanatory variables may be not linear. In these situations, the elicitation of an informative prior distribution on parameters of a univariate conditional model is challenging, because some level of statistical training is required to a medical expert for interpreting parameters and for retrieving appropriate quantitative information about them. The task can be eased and made efficient by recognizing that physicians typically distinguish among values involving medically normal and pathological patient conditions on the grounds of their personal clinical experience. In this paper, we propose a Generalized Beta regression where parameter elicitation is performed by establishing a correspondence among measured values expressed as relative positions within intervals with a clinical interpretation, regardless the original scales of variables. Software implementing the elicitation procedure is freely available.

[1]  H. Hricak,et al.  Evidence-based medicine. , 1997, Singapore medical journal.

[2]  Davide Luciani,et al.  Automated interviews on clinical case reports to elicit directed acyclic graphs , 2012, Artif. Intell. Medicine.

[3]  Nir Friedman,et al.  Probabilistic Graphical Models , 2009, Data-Driven Computational Neuroscience.

[4]  J. Ibrahim,et al.  Prior elicitation, variable selection and Bayesian computation for logistic regression models , 1999 .

[5]  Joanne Shannon,et al.  Physiologic basis of respiratory disease , 2005 .

[6]  James M. Rippe,et al.  Irwin and Rippe's intensive care medicine , 2003 .

[7]  G Bertolini,et al.  The role of Bayesian Networks in the diagnosis of pulmonary embolism , 2003, Journal of thrombosis and haemostasis : JTH.

[8]  Robert Tibshirani,et al.  The Elements of Statistical Learning: Data Mining, Inference, and Prediction, 2nd Edition , 2001, Springer Series in Statistics.

[9]  David S. Jacobs,et al.  Jacobs & DeMott laboratory test handbook , 2001 .

[10]  G. Hommel,et al.  Linear regression analysis: part 14 of a series on evaluation of scientific publications. , 2010, Deutsches Arzteblatt international.

[11]  Marek J Druzdzel,et al.  Canonical Probabilistic Models for Knowledge Engineering , 2007 .

[12]  S. Braun Respiratory Rate and Pattern , 1990 .

[13]  H. White,et al.  Logistic regression in the medical literature: standards for use and reporting, with particular attention to one medical domain. , 2001, Journal of clinical epidemiology.

[14]  C. Roussos,et al.  Clinical review: Severe asthma , 2001, Critical care.

[15]  M. Kynn The ‘heuristics and biases’ bias in expert elicitation , 2007 .

[16]  J. Gorman,et al.  Respiratory psychophysiology of panic disorder: three respiratory challenges in 98 subjects. , 1997, The American journal of psychiatry.

[17]  J. Kadane,et al.  Experiences in elicitation , 1998 .

[18]  José Mira Mira,et al.  DIAVAL, a Bayesian expert system for echocardiography , 1997, Artif. Intell. Medicine.

[19]  Marek J. Druzdzel,et al.  Learning Bayesian network parameters from small data sets: application of Noisy-OR gates , 2001, Int. J. Approx. Reason..

[20]  N. L. Johnson,et al.  Continuous Univariate Distributions. , 1995 .

[21]  Leonhard Held,et al.  Hyper-$g$ priors for generalized linear models , 2010, 1008.1550.

[22]  A. Cheng,et al.  Respiratory rate: the neglected vital sign , 2008, The Medical journal of Australia.

[23]  L. C. van der Gaag,et al.  Building probabilistic networks: Where do the numbers come from? - a guide to the literature , 2000 .

[24]  S. Ferrari,et al.  Beta Regression for Modelling Rates and Proportions , 2004 .

[25]  Luca Antiga,et al.  Bayes pulmonary embolism assisted diagnosis: a new expert system for clinical use , 2007, Emergency Medicine Journal.

[26]  Wayne S. Smith,et al.  Interactive Elicitation of Opinion for a Normal Linear Model , 1980 .

[27]  Jeremy E. Oakley,et al.  Uncertain Judgements: Eliciting Experts' Probabilities , 2006 .

[28]  R. Kirby,et al.  Breathing frequency and pattern are poor predictors of work of breathing in patients receiving pressure support ventilation. , 1995, Chest.

[29]  Fadlalla G. Elfadaly,et al.  Prior distribution elicitation for generalized linear and piecewise-linear models , 2013 .

[30]  Gerd Gigerenzer,et al.  Calculated Risks: How to Know When Numbers Deceive You , 2002 .

[31]  Federico M Stefanini,et al.  A probabilistic network for the diagnosis of acute cardiopulmonary diseases , 2016, Biometrical journal. Biometrische Zeitschrift.

[32]  Elizabeth C. Hirschman,et al.  Judgment under Uncertainty: Heuristics and Biases , 1974, Science.

[33]  R. Christensen,et al.  A New Perspective on Priors for Generalized Linear Models , 1996 .

[34]  Karin Baier,et al.  Medical Physiology Principles For Clinical Medicine , 2016 .

[35]  Alfred DeMaris,et al.  Regression With Social Data: Modeling Continuous and Limited Response Variables , 2004 .