Synthesis and Antimicrobial Activities of Oximes Derived from O‐Benzylhydroxylamine as FabH Inhibitors

Forty‐three oxime derivatives were synthesized by allowing O‐benzylhydroxylamines to react with primary benzaldehydes or salicylaldehydes; these products were gauged as potential inhibitors of β‐ketoacyl‐(acyl‐carrier‐protein) synthase III (FabH). Among the 43 compounds, 38 are reported herein for the first time. These compounds were assayed for antimicrobial activities against Escherichia coli, Pseudomonas aeruginosa, Pseudomonas fluorescens, Bacillus subtilis, Staphylococcus aureus, and Enterococcus faecalis. Compounds with prominent antibacterial activities were tested for their E. coli FabH inhibitory activities. 3‐((2,4‐Dichlorobenzyloxyimino)methyl)benzaldehyde O‐2,4‐dichlorobenzyl oxime (44) showed the best antibacterial activity, with minimum inhibitory concentrations of 3.13–6.25 μg mL−1 against the tested bacterial strains, exhibiting the best E. coli FabH inhibitory activity, with an IC50 value of 1.7 mM. Docking simulations were performed to position compound 44 into the E. coli FabH active site in order to determine the most probable binding conformation.

[1]  H. Nikaido,et al.  Broad-specificity efflux pumps and their role in multidrug resistance of Gram-negative bacteria. , 2012, FEMS microbiology reviews.

[2]  H.-L. Zhu,et al.  Advances in the research of β-ketoacyl-ACP synthase III (FabH) inhibitors. , 2012, Current medicinal chemistry.

[3]  Y. Jeong,et al.  Stereocontrolled facile synthesis and antimicrobial activity of oximes and oxime ethers of diversely substituted bispidines. , 2010, Bioorganic & medicinal chemistry letters.

[4]  N. Woodford,et al.  Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study , 2010, The Lancet. Infectious diseases.

[5]  I. Rosas,et al.  Fluoroquinolone resistance in clinical and environmental isolates of Escherichia coli in Mexico City , 2010, Journal of applied microbiology.

[6]  V. Ramkumar,et al.  Synthesis, stereochemistry and antimicrobial studies of novel oxime ethers of aza/diazabicycles. , 2009, Bioorganic & medicinal chemistry letters.

[7]  Zhu-Ping Xiao,et al.  Amines and oximes derived from deoxybenzoins as Helicobacter pylori urease inhibitors. , 2009, European journal of medicinal chemistry.

[8]  S. Prigge,et al.  Targeting the fatty acid biosynthesis enzyme, beta-ketoacyl-acyl carrier protein synthase III (PfKASIII), in the identification of novel antimalarial agents. , 2009, Journal of medicinal chemistry.

[9]  K. Jeong,et al.  Novel E. coli beta-ketoacyl-acyl carrier protein synthase III inhibitors as targeted antibiotics. , 2009, Bioorganic & medicinal chemistry.

[10]  P. Shukla,et al.  Tetrahydronaphthyl azole oxime ethers: the conformationally rigid analogues of oxiconazole as antibacterials. , 2009, European journal of medicinal chemistry.

[11]  David L. Steffen,et al.  Relationships among Ciprofloxacin, Gatifloxacin, Levofloxacin, and Norfloxacin MICs for Fluoroquinolone-Resistant Escherichia coli Clinical Isolates , 2008, Antimicrobial Agents and Chemotherapy.

[12]  Y. S. Prabhakar,et al.  QSAR studies on benzoylaminobenzoic acid derivatives as inhibitors of beta-ketoacyl-acyl carrier protein synthase III. , 2008, European journal of medicinal chemistry.

[13]  J. Frère,et al.  Treatment of health-care-associated infections caused by Gram-negative bacteria: a consensus statement. , 2008, The Lancet. Infectious diseases.

[14]  A. Henriksen,et al.  Structure of the human β‐ketoacyl [ACP] synthase from the mitochondrial type II fatty acid synthase , 2006, Protein science : a publication of the Protein Society.

[15]  S. Basak,et al.  Quantitative structure-activity relationship (QSAR) studies of quinolone antibacterials against M. fortuitum and M. smegmatis using theoretical molecular descriptors , 2006, Journal of molecular modeling.

[16]  S. Cho,et al.  A combined approach of docking and 3D QSAR study of beta-ketoacyl-acyl carrier protein synthase III (FabH) inhibitors. , 2006, Bioorganic & medicinal chemistry.

[17]  N. Petrovsky,et al.  Immunoinformatics and its relevance to understanding human immune disease , 2005, Expert review of clinical immunology.

[18]  K. Gajiwala,et al.  Structure-based design, synthesis, and study of potent inhibitors of β-ketoacyl-acyl carrier protein synthase III as potential antimicrobial agents , 2005 .

[19]  A. Shafiee,et al.  Stereoselective synthesis and antifungal activity of (Z)-trans-3-azolyl-2-methylchromanone oxime ethers. , 2004, Bioorganic & medicinal chemistry.

[20]  M. Leeb A shot in the arm , 2004 .

[21]  K. Reynolds,et al.  1,2-Dithiole-3-Ones as Potent Inhibitors of the Bacterial 3-Ketoacyl Acyl Carrier Protein Synthase III (FabH) , 2004, Antimicrobial Agents and Chemotherapy.

[22]  S. Khandekar,et al.  Bacterial beta-ketoacyl-acyl carrier protein synthases as targets for antibacterial agents. , 2003, Current protein & peptide science.

[23]  Xiayang Qiu,et al.  First X-ray cocrystal structure of a bacterial FabH condensing enzyme and a small molecule inhibitor achieved using rational design and homology modeling. , 2003, Journal of medicinal chemistry.

[24]  J. Stables,et al.  Synthesis of some 1-(2-naphthyl)-2-(imidazole-1-yl)ethanone oxime and oxime ether derivatives and their anticonvulsant and antimicrobial activities. , 2001, European journal of medicinal chemistry.

[25]  R. Puupponen-Pimiä,et al.  Antimicrobial properties of phenolic compounds from berries , 2001, Journal of applied microbiology.

[26]  M. Head,et al.  Refined structures of beta-ketoacyl-acyl carrier protein synthase III. , 2001, Journal of molecular biology.

[27]  Mary Jane Ferraro,et al.  Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically : approved standard , 2000 .

[28]  S. Abdel-Meguid,et al.  Crystal structure of beta-ketoacyl-acyl carrier protein synthase III. A key condensing enzyme in bacterial fatty acid biosynthesis. , 1999, The Journal of biological chemistry.

[29]  M. Gilmore,et al.  Multiple-drug resistant enterococci: the nature of the problem and an agenda for the future. , 1998, Emerging infectious diseases.

[30]  R. Heath,et al.  Regulation of Fatty Acid Elongation and Initiation by Acyl-Acyl Carrier Protein in Escherichia coli(*) , 1996, The Journal of Biological Chemistry.

[31]  G. Tsukamoto,et al.  Antibacterial activity of a new tetracyclic quinolone, No. 5290, against norfloxacin- and ciprofloxacin-resistant strains of Staphylococcus aureus. , 1991, Chemical & pharmaceutical bulletin.

[32]  G. Grassy,et al.  Relation structure—activité dans la série des quinolones , 1991 .

[33]  J. Waitz Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically , 1990 .

[34]  S. Mitsuhashi,et al.  In Vitro Antibacterial Activity of AM-715, a New Nalidixic Acid Analog , 1980, Antimicrobial Agents and Chemotherapy.