RNA folding: beyond Watson-Crick pairs.
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[1] K. Hoogsteen,et al. The crystal and molecular structure of a hydrogen-bonded complex between 1-methylthymine and 9-methyladenine , 1963 .
[2] M. Sundaralingam,et al. Stereochemistry of nucleic acids and their constituents. IV. Allowed and preferred conformations of nucleosides, nucleoside mono‐, di‐, tri‐, tetraphosphates, nucleic acids and polynucleotides , 1969 .
[3] A. Rich,et al. The crystal structures of purines, pyrimidines and their intermolecular complexes. , 1970, Progress in nucleic acid research and molecular biology.
[4] N C Seeman,et al. RNA double-helical fragments at atomic resolution. I. The crystal and molecular structure of sodium adenylyl-3',5'-uridine hexahydrate. , 1976, Journal of molecular biology.
[5] N C Seeman,et al. RNA double-helical fragments at atomic resolution. II. The crystal structure of sodium guanylyl-3',5'-cytidine nonahydrate. , 1976, Journal of molecular biology.
[6] A. Rich,et al. Structural domains of transfer RNA molecules. , 1976, Science.
[7] S. Arnott,et al. Models of triple-stranded polynucleotides with optimised stereochemistry. , 1976, Nucleic acids research.
[8] M. Sundaralingam,et al. Interrelationships between the pseudorotation parameters P and .tau.m and the geometry of the furanose ring , 1980 .
[9] N. Leontis,et al. Effect of magnesium ion on the structure of the 5S RNA from Escherichia coli. An imino proton magnetic resonance study of the helix I, IV, and V regions of the molecule. , 1986, Biochemistry.
[10] E. Westhof,et al. Higher order structure of chloroplastic 5S ribosomal RNA from spinach. , 1988, Biochemistry.
[11] E. Westhof,et al. Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. , 1990, Journal of molecular biology.
[12] E Westhof,et al. Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components. , 1993, Journal of molecular biology.
[13] G. Varani,et al. The conformation of loop E of eukaryotic 5S ribosomal RNA. , 1993, Biochemistry.
[14] D. Turner,et al. Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure. , 1993, Biochemistry.
[15] D Gautheret,et al. A major family of motifs involving G.A mismatches in ribosomal RNA. , 1994, Journal of molecular biology.
[16] K. Flaherty,et al. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix , 1994, Nature.
[17] T. Jovin,et al. Triad-DNA: a model for trinucleotide repeats , 1995, Nature Genetics.
[18] A. Klug,et al. The crystal structure of an AII-RNAhammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage , 1995, Cell.
[19] F. Michel,et al. Frequent use of the same tertiary motif by self‐folding RNAs. , 1995, The EMBO journal.
[20] C. Kundrot,et al. RNA Tertiary Structure Mediation by Adenosine Platforms , 1996, Science.
[21] C. Kundrot,et al. Crystal Structure of a Group I Ribozyme Domain: Principles of RNA Packing , 1996, Science.
[22] T. Garestier,et al. Oligonucleotide directed triple helix formation. , 1996, Current opinion in structural biology.
[23] E. Westhof,et al. Hydration of C-H groups in tRNA. , 1996, Faraday discussions.
[24] T. Cech,et al. Activity and thermostability of the small self-splicing group I intron in the pre-tRNA(lle) of the purple bacterium Azoarcus. , 1996, RNA.
[25] J. Doudna,et al. Metal-binding sites in the major groove of a large ribozyme domain. , 1996, Structure.
[26] J. Doudna,et al. A magnesium ion core at the heart of a ribozyme domain , 1997, Nature Structural Biology.
[27] F. Michel,et al. A group II self-splicing intron from the brown alga Pylaiella littoralis is active at unusually low magnesium concentrations and forms populations of molecules with a uniform conformation. , 1997, Journal of molecular biology.
[28] P. Moore,et al. The structure of an essential splicing element: stem loop IIa from yeast U2 snRNA. , 1997, Structure.
[29] T. Steitz,et al. Metals, Motifs, and Recognition in the Crystal Structure of a 5S rRNA Domain , 1997, Cell.
[30] S. Neidle. Oxford handbook of nucleic acid structure , 1998 .
[31] A. Ferré-D’Amaré,et al. Crystal structure of a hepatitis delta virus ribozyme , 1998, Nature.
[32] E. Westhof,et al. A common motif organizes the structure of multi-helix loops in 16 S and 23 S ribosomal RNAs. , 1998, Journal of molecular biology.
[33] C. W. Hilbers,et al. New developments in structure determination of pseudoknots , 1998, Biopolymers.
[34] T. Steitz,et al. Crystal structure of the ribosomal RNA domain essential for binding elongation factors. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[35] T. Steitz,et al. A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[36] E Westhof,et al. The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure. , 1998, RNA.
[37] J. Wedekind,et al. Crystallographic structures of the hammerhead ribozyme: relationship to ribozyme folding and catalysis. , 1998, Annual review of biophysics and biomolecular structure.
[38] E Westhof,et al. Conserved geometrical base-pairing patterns in RNA , 1998, Quarterly Reviews of Biophysics.
[39] D. Draper,et al. On the role of magnesium ions in RNA stability , 1998, Biopolymers.
[40] I. Tinoco,et al. How RNA folds. , 1999, Journal of molecular biology.
[41] A. Brunger,et al. The 1.8 A crystal structure of a statically disordered 17 base-pair RNA duplex: principles of RNA crystal packing and its effect on nucleic acid structure. , 1999, Journal of molecular biology.
[42] J. Wedekind,et al. Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis , 1999, Nature Structural Biology.
[43] U. Heinemann,et al. Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution. , 1999, RNA.
[44] S Cusack,et al. The 2 A structure of helix 6 of the human signal recognition particle RNA. , 1999, Structure.
[45] E. Westhof,et al. Aminoglycoside-RNA interactions. , 1999, Current opinion in chemical biology.
[46] D. Patel,et al. Stitching together RNA tertiary architectures. , 1999, Journal of molecular biology.
[47] E Westhof,et al. Analysis of the cooperative thermal unfolding of the td intron of bacteriophage T4. , 1999, Nucleic acids research.
[48] H. Noller,et al. Identification of an RNA-protein bridge spanning the ribosomal subunit interface. , 1999, Science.
[49] I. Wool,et al. The two faces of the Escherichia coli 23 S rRNA sarcin/ricin domain: the structure at 1.11 A resolution. , 1999, Journal of molecular biology.
[50] T. Earnest,et al. X-ray crystal structures of 70S ribosome functional complexes. , 1999, Science.
[51] C. Ehresmann,et al. The Structure of Threonyl-tRNA Synthetase-tRNAThr Complex Enlightens Its Repressor Activity and Reveals an Essential Zinc Ion in the Active Site , 1999, Cell.
[52] J. Berger,et al. Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot , 1999, Nature Structural Biology.
[53] Susan A. White,et al. A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex , 1999, Nature Structural Biology.
[54] E. Westhof,et al. A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA. , 1999, RNA.
[55] C. Ehresmann,et al. The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges. , 1999, Structure.
[56] Ignacio Tinoco,et al. Quantifying the energetic interplay of RNA tertiary and secondary structure interactions. , 1999, RNA.
[57] J. McCutcheon,et al. A Detailed View of a Ribosomal Active Site The Structure of the L11–RNA Complex , 1999, Cell.
[58] E Westhof,et al. Singly and bifurcated hydrogen-bonded base-pairs in tRNA anticodon hairpins and ribozymes. , 1999, Journal of molecular biology.
[59] E. Lattman,et al. Crystal structure of a conserved ribosomal protein-RNA complex. , 1999, Science.
[60] E Westhof,et al. Non-Watson-Crick base pairs in RNA-protein recognition. , 1999, Chemistry & biology.
[61] T. Steitz,et al. Crystal structures of two plasmid copy control related RNA duplexes: An 18 base pair duplex at 1.20 A resolution and a 19 base pair duplex at 1.55 A resolution. , 1999, Biochemistry.
[62] P. Moore,et al. Structural motifs in RNA. , 1999, Annual review of biochemistry.
[63] Batey,et al. Tertiary Motifs in RNA Structure and Folding. , 1999, Angewandte Chemie.
[64] D. Patel,et al. Adaptive recognition by nucleic acid aptamers. , 2000, Science.
[65] E Westhof,et al. On the wobble GoU and related pairs. , 2000, RNA.