The Equine PeptideAtlas: A resource for developing proteomics‐based veterinary research
暂无分享,去创建一个
R. Moritz | E. Deutsch | S. Jacobsen | E. Bendixen | Zhi Sun | L. Bundgaard | M. A. Sørensen | M. A. Sørensen
[1] R. Doolittle. Fibrinogen and fibrin. , 1981, Scientific American.
[2] R. Senior,et al. Fibrinogen-derived peptide B beta 1-42 is a multidomained neutrophil chemoattractant. , 1988, Blood.
[3] U. Schöffel,et al. Monitoring of the inflammatory response in early peritonitis. , 1989, American journal of surgery.
[4] M. Boisclair,et al. Assessment of hypercoagulable states by measurement of activation fragments and peptides. , 1990, Blood reviews.
[5] R. Canfield,et al. Isolation and partial structural characterization of an equine fibrinogen CNBr fragment that exhibits immunologic cross-reactivity with an A alpha-chain cross-linking region of human fibrinogen. , 1990, Biochemistry.
[6] M. Morimatsu,et al. Isolation and characterization of bovine haptoglobin from acute phase sera. , 1991, The Journal of biological chemistry.
[7] T. Fujinaga,et al. Equine haptoglobin: isolation, characterization, and the effects of ageing, delivery and inflammation on its serum concentration. , 1992, The Journal of veterinary medical science.
[8] D. Wagner,et al. A 130-kDa protein on endothelial cells binds to amino acids 15-42 of the B beta chain of fibrinogen. , 1992, The Journal of biological chemistry.
[9] M. Skinner,et al. Extrahepatic expression of fibrinogen by granulosa cells: potential role in ovulation. , 1993, Endocrinology.
[10] S. Gando,et al. Diagnostic and prognostic value of fibrinopeptides in patients with clinically suspected pulmonary embolism. , 1994, Thrombosis research.
[11] J. Yates,et al. Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database. , 1995, Analytical chemistry.
[12] M. Yamada,et al. The hemostatic profile of equine ovarian follicular fluid. , 1995, Thrombosis research.
[13] I. Kushner,et al. Acute-phase proteins and other systemic responses to inflammation. , 1999, The New England journal of medicine.
[14] M. Samama,et al. Laboratory Diagnosis of the Thrombophilic State in Cancer Patients , 1999, Seminars in thrombosis and hemostasis.
[15] D. Mack,et al. Elevated extrahepatic expression and secretion of mammary-associated serum amyloid A 3 (M-SAA3) into colostrum. , 2001, Veterinary immunology and immunopathology.
[16] S. Ochsner,et al. Ovulation: new dimensions and new regulators of the inflammatory-like response. , 2002, Annual review of physiology.
[17] Alexey I Nesvizhskii,et al. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. , 2002, Analytical chemistry.
[18] C. Hultén,et al. Dynamics in serum of the inflammatory markers serum amyloid A (SAA), haptoglobin, fibrinogen and alpha2-globulins during induced noninfectious arthritis in the horse. , 2010, Equine veterinary journal.
[19] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[20] M. Hellgren. Hemostasis during Normal Pregnancy and Puerperium , 2003, Seminars in thrombosis and hemostasis.
[21] Robertson Craig,et al. Open source system for analyzing, validating, and storing protein identification data. , 2004, Journal of proteome research.
[22] M. Yoshioka,et al. Current research on acute phase proteins in veterinary diagnosis: an overview. , 2004, Veterinary journal.
[23] Robertson Craig,et al. TANDEM: matching proteins with tandem mass spectra. , 2004, Bioinformatics.
[24] J. Nielsen,et al. Application of acute phase protein measurements in veterinary clinical chemistry. , 2004, Veterinary research.
[25] A. L. Jensen,et al. Use of serum amyloid A and other acute phase reactants to monitor the inflammatory response after castration in horses: a field study. , 2010, Equine veterinary journal.
[26] K. Wolff,et al. The fibrin-derived peptide Bβ15–42 protects the myocardium against ischemia-reperfusion injury , 2005, Nature Medicine.
[27] R. Aebersold,et al. A uniform proteomics MS/MS analysis platform utilizing open XML file formats , 2005, Molecular systems biology.
[28] P. Zacharowski,et al. The fibrin-derived peptide Bbeta~1~5~-~4~2 protects the myocardium against ischemia-reperfusion injury , 2005 .
[29] Eric W. Deutsch,et al. The PeptideAtlas project , 2005, Nucleic Acids Res..
[30] S. Jacobsen,et al. Concentrations of serum amyloid A in serum and synovial fluid from healthy horses and horses with joint disease. , 2006, American journal of veterinary research.
[31] C. di Ilio,et al. Proteome analysis of human follicular fluid. , 2006, Biochimica et biophysica acta.
[32] S. Jacobsen,et al. Serum amyloid A isoforms in serum and synovial fluid in horses with lipopolysaccharide-induced arthritis. , 2006, Veterinary immunology and immunopathology.
[33] S. Hobo,et al. Evaluation of serum amyloid A and surfactant protein D in sera for identification of the clinical condition of horses with bacterial pneumonia. , 2007, The Journal of veterinary medical science.
[34] A. Saalmüller,et al. Summary of the animal homologue section of HLDA8. , 2007, Veterinary immunology and immunopathology.
[35] A. S. Borges,et al. Serum iron and plasma fibrinogen concentrations as indicators of systemic inflammatory diseases in horses. , 2007, Journal of veterinary internal medicine.
[36] T. Miyasho,et al. Detection of an isoform of α1-antitrypsin in serum samples from foals with gastric ulcers , 2007, Veterinary Record.
[37] T. Miyasho,et al. Detection of an isoform of alpha(1)-antitrypsin in serum samples from foals with gastric ulcers. , 2007, The Veterinary record.
[38] A. L. Jensen,et al. Serum amyloid A isoforms in serum and synovial fluid from spontaneously diseased dogs with joint diseases or other conditions. , 2007, Veterinary immunology and immunopathology.
[39] R. Beynon,et al. Biomarkers for ragwort poisoning in horses: identification of protein targets , 2008, BMC veterinary research.
[40] Henry H. N. Lam,et al. PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows , 2008, EMBO reports.
[41] I. Quaye. Haptoglobin, inflammation and disease. , 2008, Transactions of the Royal Society of Tropical Medicine and Hygiene.
[42] Stephen E. Stein,et al. The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation , 2009, BMC Bioinformatics.
[43]
W. Qiu,et al.
A proteomic analysis of IVF follicular fluid in women
[44] J. Buhmann,et al. Protein Identification False Discovery Rates for Very Large Proteomics Data Sets Generated by Tandem Mass Spectrometry* , 2009, Molecular & Cellular Proteomics.
[45] Lennart Martens,et al. A guide to the Proteomics Identifications Database proteomics data repository , 2009, Proteomics.
[46] R. Kay,et al. Multiplexed LC‐MS/MS analysis of horse plasma proteins to study doping in sport , 2009, Proteomics.
[47] T. Martinussen,et al. Acute phase response to surgery of varying intensity in horses: a preliminary study. , 2009, Veterinary surgery : VS.
[48] Christoffersen Mette,et al. Evaluation of the systemic acute phase response and endometrial gene expression of serum amyloid A and pro- and anti-inflammatory cytokines in mares with experimentally induced endometritis. , 2010 .
[49] S. Jacobsen,et al. Evaluation of the systemic acute phase response and endometrial gene expression of serum amyloid A and pro- and anti-inflammatory cytokines in mares with experimentally induced endometritis. , 2010, Veterinary immunology and immunopathology.
[50] S. Jacobsen,et al. The acute phase protein serum amyloid A (SAA) as a marker of inflammation in horses , 2010 .
[51] Natalie I. Tasman,et al. A guided tour of the Trans‐Proteomic Pipeline , 2010, Proteomics.
[52] E. Fries,et al. Evolutionary aspects of hemoglobin scavengers. , 2010, Antioxidants & redox signaling.
[53] E. Mariman,et al. Differential expression of equine muscle biopsy proteins during normal training and intensified training in young standardbred horses using proteomics technology. , 2010, Comparative biochemistry and physiology. Part D, Genomics & proteomics.
[54] Eric W. Deutsch,et al. Mass Spectrometer Output File Format mzML , 2010, Proteome Bioinformatics.
[55] K. Nelson,et al. Upregulation of Surrogate Markers of Inflammation and Thrombogenesis in Patients With ESRD: Pathophysiologic and Therapeutic Implications , 2011, Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis.
[56] S. Jacobsen,et al. Serum amyloid A is expressed in histologically normal tissues from horses and cattle. , 2011, Veterinary immunology and immunopathology.
[57] Ruedi Aebersold,et al. Using the Human Plasma PeptideAtlas to study human plasma proteins. , 2011, Methods in molecular biology.
[58] Natalie I. Tasman,et al. iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates* , 2011, Molecular & Cellular Proteomics.
[59] M. Houška,et al. Fibrinopeptides A and B release in the process of surface fibrin formation. , 2011, Blood.
[60] S. Jacobsen,et al. Assay validation and diagnostic applications of major acute-phase protein testing in companion animals. , 2011, Clinics in laboratory medicine.
[61] A. Mobasheri,et al. High throughput proteomic analysis of the secretome in an explant model of articular cartilage inflammation , 2011, Journal of proteomics.
[62] A. Lavoie-Lamoureux,et al. Markers of systemic inflammation in horses with heaves. , 2012, Journal of veterinary internal medicine.
[63] S. Jacobsen,et al. Vaccination elicits a prominent acute phase response in horses. , 2012, Veterinary journal.
[64] Hojoong Kim,et al. Large-scale isotype-specific quantification of Serum amyloid A 1/2 by multiple reaction monitoring in crude sera. , 2012, Journal of proteomics.
[65] R. Mattos,et al. Effect of corticotherapy on proteomics of endometrial fluid from mares susceptible to persistent postbreeding endometritis. , 2012, Theriogenology.
[66] R. Aebersold,et al. A Bovine PeptideAtlas of milk and mammary gland proteomes , 2012, Proteomics.
[67] S. Jacobsen,et al. Serum amyloid A and haptoglobin concentrations in serum and peritoneal fluid of healthy horses and horses with acute abdominal pain. , 2013, Veterinary clinical pathology.
[68] B. McGorum,et al. In equine grass sickness, serum amyloid A and fibrinogen are elevated, and can aid differential diagnosis from non-inflammatory causes of colic , 2013, Veterinary Record.