Perspective on the reactions between F- and CH3CH2F: the free energy landscape of the E2 and SN2 reaction channels.

Recently, we computed the 3D free energy surface of the base-induced elimination reaction between F(-) and CH(3)CH(2)F by using a powerful technique within Car-Parrinello molecular dynamics simulation. Here, the set of three order parameters is expanded to six, which allows the study of the competing elimination and substitution reactions simultaneously. The power of the method is exemplified by the exploration of the six-dimensional free energy landscape, sampling, and mapping out the eight stable states as well as the connecting bottlenecks. The free energy profile and barrier along the E2 and S(N)2 reaction channels are refined by using umbrella sampling. The two mechanisms do not share a common "E2C-like" transition state. Comparison with the zero temperature profiles shows a particularly significant entropy contribution to the S(N)2 channel.

[1]  Gianni Cardini,et al.  Substitution and Elimination Reaction of F- with C2H5Cl: An ab Initio Molecular Dynamics Study , 2003 .

[2]  J. Beauchamp,et al.  Reactions of strong bases with alkyl halides in the gas phase. New look at E2 base-induced elimination reactions without solvent participation , 1974 .

[3]  K. Fukui The path of chemical reactions - the IRC approach , 1981 .

[4]  Andrew E. Torda,et al.  Local elevation: A method for improving the searching properties of molecular dynamics simulation , 1994, J. Comput. Aided Mol. Des..

[5]  R. Swendsen,et al.  THE weighted histogram analysis method for free‐energy calculations on biomolecules. I. The method , 1992 .

[6]  K. Fukui Formulation of the reaction coordinate , 1970 .

[7]  G. Merrill,et al.  Systematic Study of the Potential Energy Surface for the Base-Induced Elimination Reaction of Fluoride Ion with Ethyl Fluoride Using Density Functional Theory , 1997 .

[8]  Alessandro Laio,et al.  Efficient exploration of reactive potential energy surfaces using Car-Parrinello molecular dynamics. , 2003, Physical review letters.

[9]  Alessandro Laio,et al.  A minimum free energy reaction path for the E2 reaction between fluoro ethane and a fluoride ion. , 2004, Journal of the American Chemical Society.

[10]  Car,et al.  Unified approach for molecular dynamics and density-functional theory. , 1985, Physical review letters.

[11]  A. Laio,et al.  Escaping free-energy minima , 2002, Proceedings of the National Academy of Sciences of the United States of America.