Habitat restoration opportunities, climatic niche contraction, and conservation biogeography in California's San Joaquin Desert

A recent global trend toward retirement of farmland presents opportunities to reclaim habitat for threatened and endangered species. We examine habitat restoration opportunities in one of the world’s most converted landscapes, California’s San Joaquin Desert (SJD). Despite the presence of 35 threatened and endangered species, agricultural expansion continues to drive habitat loss in the SJD, even as marginal farmland is retired. Over the next decades a combination of factors, including salinization, climate change, and historical groundwater overdraft, are projected to lead to the retirement of more than 2,000 km2 of farmland in the SJD. To promote strategic habitat protection and restoration, we conducted a quantitative assessment of habitat loss and fragmentation, habitat suitability, climatic niche stability, climate change impacts, habitat protection, and reintroduction opportunities for an umbrella species of the SJD, the endangered blunt-nosed leopard lizard (Gambelia sila). We use our suitability models, in conjunction with modern and historical land use maps, to estimate the historical and modern rate of habitat loss to development. The estimated amount of habitat lost since the species became protected under endangered species law in 1967 is greater than the total amount of habitat currently protected through public ownership and conservation easement. We document climatic niche contraction and associated range contraction away from the more mesic margins of the species’ historical distribution, driven by the anthropogenic introduction of exotic grasses and forbs. The impact of exotic species on G. sila range dynamics appears to be still unfolding. Finally, we use NASA fallowed area maps to identify 610 km2 of fallowed or retired agricultural land with high potential to again serve as habitat. We discuss conservation strategies in light of the potential for habitat restoration and multiple drivers of ongoing and historical habitat loss.

[1]  C. Lortie,et al.  Better late than never: a synthesis of strategic land retirement and restoration in California , 2018, Ecosphere.

[2]  B. Sinervo,et al.  Climate change, thermal niches, extinction risk and maternal-effect rescue of toad-headed lizards, Phrynocephalus, in thermal extremes of the Arabian Peninsula to the Qinghai-Tibetan Plateau. , 2018, Integrative zoology.

[3]  K.,et al.  Homogenization of plant diversity, composition, and structure in North American urban yards , 2018 .

[4]  A. Leaché,et al.  Persistence of historical population structure in an endangered species despite near‐complete biome conversion in California's San Joaquin Desert , 2017, Molecular ecology.

[5]  B. Sinervo,et al.  Range increment or range detriment? Predicting potential changes in distribution caused by climate change for the endemic high-Andean lizard Phymaturus palluma , 2017 .

[6]  B. Sinervo,et al.  Contemporary Drought and Future Effects of Climate Change on the Endangered Blunt-Nosed Leopard Lizard, Gambelia sila , 2016, PloS one.

[7]  J. Chormański,et al.  Prediction accuracy of selected spatial interpolation methods for soil texture at farm field scale , 2015 .

[8]  G. Heuvelink,et al.  Mapping Soil Properties of Africa at 250 m Resolution: Random Forests Significantly Improve Current Predictions , 2015, PloS one.

[9]  A. Aghakouchak,et al.  Global warming and changes in risk of concurrent climate extremes: Insights from the 2014 California drought , 2014 .

[10]  Daniel Griffin,et al.  How unusual is the 2012–2014 California drought? , 2014 .

[11]  D. Germano,et al.  Mitochondrial phylogeography of the endangered blunt-nosed leopard lizard, Gambelia sila , 2014 .

[12]  G. Heuvelink,et al.  SoilGrids1km — Global Soil Information Based on Automated Mapping , 2014, PloS one.

[13]  J. Brashares,et al.  Species distribution models of an endangered rodent offer conflicting measures of habitat quality at multiple scales , 2014 .

[14]  C. Folke,et al.  Farmland abandonment: threat or opportunity for biodiversity conservation? A global review , 2014 .

[15]  L. Hipps,et al.  Probable causes of the abnormal ridge accompanying the 2013–2014 California drought: ENSO precursor and anthropogenic warming footprint , 2014 .

[16]  Boris Schröder,et al.  The importance of correcting for sampling bias in MaxEnt species distribution models , 2013 .

[17]  Jesse H. Ausubel,et al.  Peak Farmland and the Prospect for Land Sparing , 2013 .

[18]  Matthew J. Smith,et al.  The Effects of Sampling Bias and Model Complexity on the Predictive Performance of MaxEnt Species Distribution Models , 2013, PloS one.

[19]  S. Preston,et al.  Sources of Population Aging in More and Less Developed Countries. , 2012, Population and development review.

[20]  J. Bruinsma,et al.  World agriculture towards 2030/2050: the 2012 revision , 2012 .

[21]  G. Rathbun,et al.  Effects of grazing and invasive grasses on desert vertebrates in California , 2012 .

[22]  J. Brashares,et al.  Partitioning the effects of an ecosystem engineer: kangaroo rats control community structure via multiple pathways. , 2012, The Journal of animal ecology.

[23]  Alan L. Flint,et al.  Downscaling future climate scenarios to fine scales for hydrologic and ecological modeling and analysis , 2012, Ecological Processes.

[24]  Larry M. Vredenburgh,et al.  The San Joaquin Desert of California: Ecologically Misunderstood and Overlooked , 2011 .

[25]  B. Gimeno,et al.  Nitrogen critical loads and management alternatives for N-impacted ecosystems in California. , 2010, Journal of environmental management.

[26]  C. Atkinson,et al.  Thermal Constraints to the Sporogonic Development and Altitudinal Distribution of Avian Malaria Plasmodium relictum in Hawai'i , 2010, The Journal of parasitology.

[27]  K. Beard,et al.  A Meta‐Analytic Review of Corridor Effectiveness , 2010, Conservation biology : the journal of the Society for Conservation Biology.

[28]  M. Massot,et al.  Erosion of Lizard Diversity by Climate Change and Altered Thermal Niches , 2010, Science.

[29]  A. Newton,et al.  Enhancement of Biodiversity and Ecosystem Services by Ecological Restoration: A Meta-Analysis , 2009, Science.

[30]  J. Lawler Climate Change Adaptation Strategies for Resource Management and Conservation Planning , 2009, Annals of the New York Academy of Sciences.

[31]  Kalle Ruokolainen,et al.  Analysing botanical collecting effort in Amazonia and correcting for it in species range estimation , 2007 .

[32]  D. Germano,et al.  FOOD HABITS OF THE BLUNT-NOSED LEOPARD LIZARD (GAMBELIA SILA) , 2007 .

[33]  M. Pace,et al.  Understanding the long-term effects of species invasions. , 2006, Trends in ecology & evolution.

[34]  Gerrit Schoups,et al.  Sustainability of irrigated agriculture in the San Joaquin Valley, California , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[35]  E. Lacey,et al.  Mammalian Diversification: From Chromosomes to Phylogeography (A Celebration of the Career of James L. Patton) , 2005 .

[36]  S. Carpenter,et al.  Global Consequences of Land Use , 2005, Science.

[37]  E. Dzialowski Use of operative temperature and standard operative temperature models in thermal biology , 2005 .

[38]  Daniel F. Williams,et al.  Population Ecology of Blunt-Nosed Leopard Lizards in High Elevation Foothill Habitat , 2005 .

[39]  J. Crooks Lag times and exotic species: The ecology and management of biological invasions in slow-motion , 2005 .

[40]  Richard Field,et al.  ENERGY, WATER, AND BROAD‐SCALE GEOGRAPHIC PATTERNS OF SPECIES RICHNESS , 2003 .

[41]  David R. Anderson,et al.  Model selection and multimodel inference : a practical information-theoretic approach , 2003 .

[42]  R. Kinerson,et al.  Primary Productivity and Water Use in Native Forest, Grassland, and Desert Ecosystems , 1978 .

[43]  D. B. Means Competitive exclusion along a habitat gradient between two species of salamanders (Desmognathus) in western Florida , 1975 .

[44]  R. R. Montanucci OBSERVATIONS ON THE SAN JOAQUIN LEOPARD LIZARD, CROTAPHYTUS WISLIZENII SILUS STEJNEGER , 2016 .

[45]  B. Cypher,et al.  Quantity and distribution of suitable habitat for endangered San Joaquin kit foxes : conservation implications , 2013 .

[46]  Dave M. Augeri,et al.  RESEARCH The importance of correcting for sampling bias in MaxEnt species distribution models , 2013 .

[47]  E. Allen Restoration Ecology: Limits and Possibilities in Arid and Semiarid Lands , 2010 .

[48]  Bear Creek,et al.  CENTRAL VALLEY REGIONAL WATER QUALITY CONTROL BOARD , 2009 .

[49]  C. Keen,et al.  California Agriculture , 2007 .

[50]  Aaron Schusteff,et al.  5-Year Review: Summary and Evaluation , 2007 .

[51]  Daniel F. Williams,et al.  Documenting Ecological Change in Time and Space: The San Joaquin Valley of California , 2005 .

[52]  G. Rathbun,et al.  Managing exotic grasses and conserving declining species , 2001 .

[53]  Daniel F. Williams,et al.  The Kangaroo Rats of California: endemism and conservation of keystone species , 1997 .

[54]  L. S. Pereira,et al.  Sustainability of irrigated agriculture. , 1996 .

[55]  Daniel F. Williams Recovery of the Blunt-Nosed Leopard Lizard: Past Efforts, Present Knowledge, and Future Opportunities , 1992 .

[56]  L. Wester Composition of native grasslands in the San Joaquin Valley, California. , 1981 .

[57]  Stewart Udall Native Fish and Wildlife Endangered Species , 1967 .