Advances in insect phylogeny at the dawn of the postgenomic era.
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David K Yeates | Rolf Beutel | R. Beutel | K. Kjer | D. Yeates | Michelle Trautwein | B. Wiegmann | Karl M Kjer | Michelle D Trautwein | Brian M Wiegmann
[1] N. P. Kristensen. Phylogeny of endopterygote insects, the most successful lineage of living organisms , 2013 .
[2] R. Beutel,et al. On the head morphology of Phyllium and the phylogenetic relationships of Phasmatodea (Insecta) , 2012 .
[3] A. Seago,et al. Phylogeny of the Coleoptera Based on Morphological Characters of Adults and Larvae , 2011 .
[4] R. Copley,et al. Improving animal phylogenies with genomic data. , 2011, Trends in genetics : TIG.
[5] R. Beutel,et al. On the head morphology of Grylloblattodea (Insecta) and the systematic position of the order, with a new nomenclature for the head muscles of Dicondylia , 2011 .
[6] Susan J. Brown,et al. Creating a buzz about insect genomes. , 2011, Science.
[7] Markus Friedrich,et al. Episodic radiations in the fly tree of life , 2011, Proceedings of the National Academy of Sciences.
[8] H. Philippe,et al. Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough , 2011, PLoS biology.
[9] Alex Boyd,et al. Hal: an Automated Pipeline for Phylogenetic Analyses of Genomic Data , 2011, PLoS currents.
[10] T. Miyata,et al. Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences. , 2011, Molecular phylogenetics and evolution.
[11] A. Ricci,et al. The mitochondrial genome of Bacillus stick insects (Phasmatodea) and the phylogeny of orthopteroid insects. , 2011, Molecular phylogenetics and evolution.
[12] J. Pardo,et al. First Fossil Orthoptera from the Jurassic of North America , 2011, Journal of Paleontology.
[13] T. Fischer,et al. First beetle elytra, abdomen (Coleoptera) and a mine trace from Lunz (Carnian, Late Triassic, Lunz‐am‐See, Austria) and their taphonomical and evolutionary aspects , 2011 .
[14] R. Beutel,et al. Adult head structures of Deuterophlebiidae (Insecta), a highly derived "ancestral" dipteran lineage. , 2011, Arthropod structure & development.
[15] G. Edgecombe,et al. A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata , 2011, Proceedings of the Royal Society B: Biological Sciences.
[16] C. Labandeira. The Pollination of Mid Mesozoic Seed Plants and the Early History of Long-proboscid Insects1,2,3 , 2010 .
[17] R. Beutel,et al. Goodbye Halteria? The thoracic morphology of Endopterygota (Insecta) and its phylogenetic implications , 2010, Cladistics : the international journal of the Willi Hennig Society.
[18] A. von Haeseler,et al. A phylogenomic approach to resolve the arthropod tree of life. , 2010, Molecular biology and evolution.
[19] Ryan J. Yoder,et al. Expressed sequence tags reveal Proctotrupomorpha (minus Chalcidoidea) as sister to Aculeata (Hymenoptera: Insecta). , 2010, Molecular phylogenetics and evolution.
[20] N. Wahlberg,et al. Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies , 2010, Proceedings of the Royal Society B: Biological Sciences.
[21] D. Grimaldi,et al. Reconstructing the anatomy of the 42-million-year-old fossil †Mengeatertiaria (Insecta, Strepsiptera) , 2010, Die Naturwissenschaften.
[22] Brian D. Farrell,et al. 9-Genes Reinforce the Phylogeny of Holometabola and Yield Alternate Views on the Phylogenetic Placement of Strepsiptera , 2010, PloS one.
[23] Gavin J. Svenson,et al. Family‐level relationships of the spittlebugs and froghoppers (Hemiptera: Cicadomorpha: Cercopoidea) , 2010 .
[24] N. Hardy,et al. On wings of lace: phylogeny and Bayesian divergence time estimates of Neuropterida (Insecta) based on morphological and molecular data , 2010 .
[25] R. Beutel,et al. Head morphology of Osmylus fulvicephalus (Osmylidae, Neuroptera) and its phylogenetic implications , 2010, Organisms Diversity & Evolution.
[26] A. Vogler,et al. Ribosomal protein genes of holometabolan insects reject the Halteria, instead revealing a close affinity of Strepsiptera with Coleoptera. , 2010, Molecular phylogenetics and evolution.
[27] K. Yoshizawa,et al. How stable is the "Polyphyly of Lice" hypothesis (Insecta: Psocodea)?: a comparison of phylogenetic signal in multiple genes. , 2010, Molecular phylogenetics and evolution.
[28] L. Vilhelmsen,et al. Beyond the wasp‐waist: structural diversity and phylogenetic significance of the mesosoma in apocritan wasps (Insecta: Hymenoptera) , 2010 .
[29] J. Mallatt,et al. Nearly complete rRNA genes assembled from across the metazoan animals: effects of more taxa, a structure-based alignment, and paired-sites evolutionary models on phylogeny reconstruction. , 2010, Molecular phylogenetics and evolution.
[30] K. Yoshizawa,et al. Direct optimization overly optimizes data , 2010 .
[31] R. Beutel,et al. The larval head of Nevrorthidae and the phylogeny of Neuroptera (Insecta) , 2010 .
[32] D. Grimaldi. 400 million years on six legs: on the origin and early evolution of Hexapoda. , 2010, Arthropod structure & development.
[33] J. Shultz,et al. Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences , 2010, Nature.
[34] Daniel Janies,et al. Tracking the geographical spread of avian influenza (H5N1) with multiple phylogenetic trees , 2010, Cladistics : the international journal of the Willi Hennig Society.
[35] B. Schierwater,et al. On the value of Elongation factor-1alpha for reconstructing pterygote insect phylogeny. , 2010, Molecular phylogenetics and evolution.
[36] Mark Johnston,et al. Leveraging skewed transcript abundance by RNA-Seq to increase the genomic depth of the tree of life , 2010, Proceedings of the National Academy of Sciences.
[37] I-Min A. Chen,et al. The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..
[38] G. Edgecombe,et al. The position of crustaceans within Arthropoda - Evidence from nine molecular loci and morphology , 2010 .
[39] Fredrik Ronquist,et al. Bayesian phylogenetics and its influence on insect systematics. , 2010, Annual review of entomology.
[40] D. Janzen,et al. Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study , 2009, BMC Evolutionary Biology.
[41] J. Ribeiro,et al. The Tempo and Mode of Evolution of Transposable Elements as Revealed by Molecular Phylogenies Reconstructed from Mosquito Genomes , 2009, Evolution; international journal of organic evolution.
[42] A. von Haeseler,et al. A phylogenomic approach to resolve the basal pterygote divergence. , 2009, Molecular biology and evolution.
[43] Mark Johnston,et al. Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics. , 2009, Molecular biology and evolution.
[44] T. Burmester,et al. Hemocyanin suggests a close relationship of Remipedia and Hexapoda. , 2009, Molecular biology and evolution.
[45] M. Whiting,et al. A mitochondrial genome phylogeny of the Neuropterida (lace‐wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders , 2009 .
[46] A. V. Konstantinova,et al. On the phylogenetic position of insects in the Pancrustacea clade , 2009, Molecular Biology.
[47] R. Beutel,et al. Probing the Drosophila retinal determination gene network in Tribolium (II): The Pax6 genes eyeless and twin of eyeless. , 2009, Developmental biology.
[48] David K Yeates,et al. Single-copy nuclear genes resolve the phylogeny of the holometabolous insects , 2009, BMC Biology.
[49] M. Friedrich,et al. Molecular evolution of the Drosophila retinome: exceptional gene gain in the higher Diptera. , 2009, Molecular biology and evolution.
[50] Antonis Rokas,et al. Harnessing genomics for evolutionary insights. , 2009, Trends in ecology & evolution.
[51] Yan Qin,et al. Phylogenetic comparison of local length plasticity of the small subunit of nuclear rDNAs among all Hexapoda orders and the impact of hyper-length-variation on alignment. , 2009, Molecular phylogenetics and evolution.
[52] M. Telford,et al. Arthropods Are Monophyletic Arthropods Are Ecdysozoans the Origin and Evolution of Arthropods Insight Review , 2022 .
[53] Christophe Dessimoz,et al. Phylogenetic and Functional Assessment of Orthologs Inference Projects and Methods , 2009, PLoS Comput. Biol..
[54] P. Cranston,et al. Phylogeny of Insects , 2009 .
[55] Naomi S. Altman,et al. Comparison of next generation sequencing technologies for transcriptome characterization , 2009, BMC Genomics.
[56] J. Wägele,et al. Can comprehensive background knowledge be incorporated into substitution models to improve phylogenetic analyses? A case study on major arthropod relationships , 2009, BMC Evolutionary Biology.
[57] Jason E Stajich,et al. Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. , 2008, Systematic biology.
[58] K. Zhou,et al. The complete mitochondrial genome of Parafronurus youi (Insecta: Ephemeroptera) and phylogenetic position of the Ephemeroptera. , 2008, Gene.
[59] S. Pongor,et al. The quest for orthologs: finding the corresponding gene across genomes. , 2008, Trends in genetics : TIG.
[60] M. Whiting,et al. Head morphology of Caurinus (Boreidae, Mecoptera) and its phylogenetic implications. , 2008, Arthropod structure & development.
[61] T. Lovejoy. Climate change and biodiversity. , 2008, Revue scientifique et technique.
[62] K. Klass,et al. Relationships among the major lineages of Dictyoptera: the effect of outgroup selection on dictyopteran tree topology , 2008 .
[63] David Q. Matus,et al. Broad phylogenomic sampling improves resolution of the animal tree of life , 2008, Nature.
[64] Michael Q. Zhang,et al. Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species , 2008, Bioinform..
[65] D. Jarzen,et al. Early steps of angiosperm–pollinator coevolution , 2008, Proceedings of the National Academy of Sciences.
[66] R. Beutel,et al. The thorax of Zorotypus (Hexapoda, Zoraptera) and a new nomenclature for the musculature of Neoptera. , 2008, Arthropod structure & development.
[67] K. Kjer,et al. Ancient rapid radiations of insects: challenges for phylogenetic analysis. , 2008, Annual review of entomology.
[68] D. Roelofs,et al. Revealing pancrustacean relationships: Phylogenetic analysis of ribosomal protein genes places Collembola (springtails) in a monophyletic Hexapoda and reinforces the discrepancy between mitochondrial and nuclear DNA markers , 2008, BMC Evolutionary Biology.
[69] B. Misof,et al. Towards an 18S phylogeny of hexapods: accounting for group-specific character covariance in optimized mixed nucleotide/doublet models. , 2007, Zoology.
[70] Pietro Liò,et al. Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea , 2007, BMC Evolutionary Biology.
[71] Frank Hünefeld. The genital morphology of Zorotypus hubbardi Caudell, 1918 (Insecta: Zoraptera: Zorotypidae) , 2007, Zoomorphology.
[72] P. Eggleton,et al. Death of an order: a comprehensive molecular phylogenetic study confirms that termites are eusocial cockroaches , 2007, Biology Letters.
[73] J. Vermunt,et al. Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes , 2007, PloS one.
[74] K. Yoshizawa. The Zoraptera problem: evidence for Zoraptera + Embiodea from the wing base , 2007 .
[75] J. Rust,et al. The first fossil leaf insect: 47 million years of specialized cryptic morphology and behavior , 2007, Proceedings of the National Academy of Sciences.
[76] P. Bork,et al. Quantification of insect genome divergence. , 2007, Trends in genetics : TIG.
[77] S. Harzsch,et al. Evolution of eye development in arthropods: phylogenetic aspects. , 2006, Arthropod structure & development.
[78] G. Weinstock,et al. Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. , 2006, Genome research.
[79] H. Philippe,et al. Large-scale sequencing and the new animal phylogeny. , 2006, Trends in ecology & evolution.
[80] S. Carroll,et al. Bushes in the Tree of Life , 2006, PLoS biology.
[81] Stanislav N. Gorb,et al. A Revised Interpretation of the Evolution of Attachment Structures in Hexapoda with Special Emphasis on Mantophasmatodea , 2006 .
[82] M. Engel. A note on the relic silverfish Tricholepidion gertschi (Zygentoma) , 2006 .
[83] J. Mallatt,et al. Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch. , 2006, Molecular phylogenetics and evolution.
[84] F. Frati,et al. A review of molecular data for the phylogeny of basal hexapods , 2006 .
[85] V. Laudet,et al. The rapid divergence of the ecdysone receptor is a synapomorphy for Mecopterida that clarifies the Strepsiptera problem , 2006, Insect molecular biology.
[86] R. Beutel,et al. Endopterygote systematics – where do we stand and what is the goal (Hexapoda, Arthropoda)? , 2006 .
[87] Alfried P Vogler,et al. Dense taxonomic EST sampling and its applications for molecular systematics of the Coleoptera (beetles). , 2006, Molecular biology and evolution.
[88] M. Whiting,et al. Evidence from mitochondrial genomics on interordinal relationships in insects , 2006, Arthropod Systematics & Phylogeny.
[89] M. Whiting,et al. Mitochondrial genomics and the new insect order Mantophasmatodea. , 2006, Molecular phylogenetics and evolution.
[90] S. Carroll,et al. Animal Evolution and the Molecular Signature of Radiations Compressed in Time , 2005, Science.
[91] R. Machida,et al. Embryonic development of Galloisiana yuasai Asahina, with special reference to external morphology (Insecta: Grylloblattodea) , 2005, Journal of morphology.
[92] K. Yoshizawa,et al. Aligned 18S for Zoraptera (Insecta): phylogenetic position and molecular evolution. , 2005, Molecular phylogenetics and evolution.
[93] R. Beutel,et al. The phylogeny of Strepsiptera (Hexapoda) , 2005, Cladistics : the international journal of the Willi Hennig Society.
[94] S. Barker,et al. Multiple origins of parasitism in lice: phylogenetic analysis of SSU rDNA indicates that the Phthiraptera and Psocoptera are not monophyletic , 2005, Parasitology Research.
[95] F. Haas,et al. Phylogeny of earwigs (Insecta: Dermaptera) based on molecular and morphological evidence: reconsidering the classification of Dermaptera , 2005 .
[96] J. Mallatt,et al. The phylogenetic positions of three Basal-hexapod groups (protura, diplura, and collembola) based on ribosomal RNA gene sequences. , 2005, Molecular biology and evolution.
[97] M. Whiting,et al. Mantophasmatodea and phylogeny of the lower neopterous insects , 2005 .
[98] R. Beutel,et al. Cephalic anatomy of Zorotypus hubbardi (Hexapoda: Zoraptera): new evidence for a relationship with Acercaria , 2005, Zoomorphology.
[99] S. Edwards,et al. Phylogenetics of modern birds in the era of genomics , 2005, Proceedings of the Royal Society B: Biological Sciences.
[100] D. Grimaldi,et al. Evolution of the insects , 2005 .
[101] M. Dowton,et al. The position of the Hymenoptera within the Holometabola as inferred from the mitochondrial genome of Perga condei (Hymenoptera: Symphyta: Pergidae). , 2005, Molecular phylogenetics and evolution.
[102] J. Shultz,et al. Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic , 2005, Proceedings of the Royal Society B: Biological Sciences.
[103] Veiko Krauss,et al. Phylogenetic mapping of intron positions: a case study of translation initiation factor eIF2gamma. , 2005, Molecular biology and evolution.
[104] M. Bastiani,et al. The structure of the USP/RXR of Xenos pecki indicates that Strepsiptera are not closely related to Diptera , 2005, Development Genes and Evolution.
[105] James M. Carpenter,et al. Is Ellipura monophyletic? A combined analysis of basal hexapod relationships with emphasis on the origin of insects , 2004 .
[106] Pavel A Pevzner,et al. Mammalian phylogenomics comes of age. , 2004, Trends in genetics : TIG.
[107] V. Smith,et al. Multiple origins of parasitism in lice , 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[108] E. Haring,et al. Phylogeny of the Neuropterida: a first molecular approach , 2004 .
[109] K. Kjer,et al. Aligned 18S and insect phylogeny. , 2004, Systematic biology.
[110] J. Shultz,et al. Phylogeny of Basal Hexapod Lineages and Estimates of Divergence Times , 2004 .
[111] J. Kukalová-Peck,et al. Relationships among coleopteran suborders and major endoneopteran lineages: Evidence from hind wing characters , 2004 .
[112] Martin Fanenbruck,et al. The brain of the Remipedia (Crustacea) and an alternative hypothesis on their phylogenetic relationships. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[113] M. Whiting,et al. The problem with “the Paleoptera Problem:” sense and sensitivity , 2003, Cladistics : the international journal of the Willi Hennig Society.
[114] C. Bandi,et al. Evidence for cocladogenesis between diverse dictyopteran lineages and their intracellular endosymbionts. , 2003, Molecular biology and evolution.
[115] J. Boore,et al. Hexapod Origins: Monophyletic or Paraphyletic? , 2003, Science.
[116] K. Klass,et al. Phylogeny of the Dictyoptera Re-examined (Insecta) , 2003 .
[117] Jian Wang,et al. The Genome Sequence of the Malaria Mosquito Anopheles gambiae , 2002, Science.
[118] T. Pape,et al. The Palaeoptera Problem: Basal Pterygote Phylogeny Inferred from 18S and 28S rDNA Sequences , 2002, Cladistics : the international journal of the Willi Hennig Society.
[119] T. Pape,et al. The Palaeoptera Problem: Basal Pterygote Phylogeny Inferred from 18S and 28S rDNA Sequences , 2002 .
[120] K. Klass,et al. Mantophasmatodea: A New Insect Order with Extant Members in the Afrotropics , 2002, Science.
[121] M. Whiting. Mecoptera is paraphyletic: multiple genes and phylogeny of Mecoptera and Siphonaptera , 2002 .
[122] Stanislav N. Gorb,et al. Ultrastructure of attachment specializations of hexapods (Arthropoda): evolutionary patterns inferred from a revised ordinal phylogeny , 2001 .
[123] Gonzalo Giribet,et al. Arthropod phylogeny based on eight molecular loci and morphology , 2001, Nature.
[124] James M. Carpenter,et al. The Phylogeny of the Extant Hexapod Orders , 2001, Cladistics : the international journal of the Willi Hennig Society.
[125] K. Yoshizawa,et al. Phylogenetic analysis of paraneopteran orders (Insecta: Neoptera) based on forewing base structure, with comments on monophyly of Auchenorrhyncha (Hemiptera) , 2001 .
[126] U. Aspöck,et al. Cladistic analysis of Neuroptera and their systematic position within Neuropterida (Insecta: Holometabola: Neuropterida: Neuroptera) , 2001 .
[127] O. Kraus. Myriapoda and the ancestry of the hexapoda , 2001 .
[128] K. Klass,et al. The ground plan and affinities of hexapods : Recent progress and open problems , 2001 .
[129] P. Holland,et al. Rare genomic changes as a tool for phylogenetics. , 2000, Trends in ecology & evolution.
[130] H. Noda,et al. Evidence from multiple gene sequences indicates that termites evolved from wood-feeding cockroaches , 2000, Current Biology.
[131] M. Krasnow,et al. The Drosophila genome sequence: implications for biology and medicine. , 2000, Science.
[132] D. Grimaldi,et al. A Winged Zorotypus in Miocene Amber from the Dominician Republic (Zoraptera: Zorotypidae), with Discussion on Relationships of and within the Order , 2000 .
[133] A. Staniczek. The mandible of silverfish (Insecta: Zygentoma) and mayflies (Ephemeroptera): its morphology and phylogenetic significance. , 2000 .
[134] P. Holland,et al. Intron insertion as a phylogenetic character: the engrailed homeobox of Strepsiptera does not indicate affinity with Diptera , 1999, Insect molecular biology.
[135] J. Huelsenbeck. Systematic bias in phylogenetic analysis: is the Strepsiptera problem solved? , 1998, Systematic biology.
[136] W C Wheeler,et al. The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. , 1997, Systematic biology.
[137] W. Wheeler,et al. Insect homeotic transformation , 1994, Nature.
[138] N. P. Kristensen. Phylogeny of Insect Orders , 1981 .
[139] W. Hennig,et al. Die Stammesgeschichte der Insekten , 1970 .
[140] R. A. Crowson. The Phylogeny of Coleoptera , 1960 .