Lightweight Model For The Prediction of COVID-19 Through The Detection And Segmentation of Lesions in Chest CT Scans

We introduce a lightweight Mask R-CNN model that segments areas with the Ground Glass Opacity and Consolidation in chest CT scans. The model uses truncated ResNet18 and ResNet34 nets with a single layer of Feature Pyramid Network as a backbone net, thus substantially reducing the number of the parameters and the training time compared to similar solutions using deeper networks. Without any data balancing and manipulations, and using only a small fraction of the training data, COVID-CT-Mask-Net classification model with 6.12M total and 600K trainable parameters derived from Mask R-CNN, achieves 91.35% COVID-19 sensitivity, 91.63% Common Pneumonia sensitivity, 96.98% true negative rate and 93.95% overall accuracy on COVIDx-CT dataset (21191 images). We also present a thorough analysis of the regional features critical to the correct classification of the image. The full source code, models and pretrained weights are available on https://github.com/AlexTS1980/COVID-CT-Mask-Net.

[1]  Dahai Zhao,et al.  A comparative study on the clinical features of COVID-19 pneumonia to other pneumonias , 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[2]  Pietro Perona,et al.  Microsoft COCO: Common Objects in Context , 2014, ECCV.

[3]  K. Cao,et al.  Using Artificial Intelligence to Detect COVID-19 and Community-acquired Pneumonia Based on Pulmonary CT: Evaluation of the Diagnostic Accuracy , 2020 .

[4]  Milan Sonka,et al.  COVID CT-Net: Predicting Covid-19 From Chest CT Images Using Attentional Convolutional Network , 2020, ArXiv.

[5]  Pengtao Xie,et al.  COVID-CT-Dataset: A CT Scan Dataset about COVID-19 , 2020, ArXiv.

[6]  Alexander Wong,et al.  COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images , 2020, Scientific reports.

[7]  Ming-Ming Cheng,et al.  JCS: An Explainable COVID-19 Diagnosis System by Joint Classification and Segmentation , 2020, IEEE Transactions on Image Processing.

[8]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[9]  Kaiming He,et al.  Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks , 2015, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[10]  Haibo Xu,et al.  AI-assisted CT imaging analysis for COVID-19 screening: Building and deploying a medical AI system in four weeks , 2020, medRxiv.

[11]  Jun Liu,et al.  CT Scans of Patients with 2019 Novel Coronavirus (COVID-19) Pneumonia , 2020, Theranostics.

[12]  Kaiming He,et al.  Mask R-CNN , 2017, 2017 IEEE International Conference on Computer Vision (ICCV).

[13]  Aram Ter-Sarkisov COVID-CT-Mask-Net: Prediction of COVID-19 from CT Scans Using Regional Features , 2020 .

[14]  P. Wong,et al.  Automatic distinction between COVID-19 and common pneumonia using multi-scale convolutional neural network on chest CT scans , 2020, Chaos, Solitons & Fractals.

[15]  W. Liang,et al.  Clinically Applicable AI System for Accurate Diagnosis, Quantitative Measurements, and Prognosis of COVID-19 Pneumonia Using Computed Tomography , 2020, Cell.

[16]  A. Ter-Sarkisov,et al.  Detection and Segmentation of Lesion Areas in Chest CT Scans For The Prediction of COVID-19 , 2020, medRxiv.

[17]  Junwei Su,et al.  Deep learning system to screen coronavirus disease 2019 pneumonia , 2020 .