Natural variation of chronological aging in the Saccharomyces cerevisiae species reveals diet-dependent mechanisms of life span control
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Tomasz M. Ignac | Nicole Paczia | Carole L Linster | Patrick May | Tomasz Ignac | Paul P Jung | Christian Jaeger | P. May | Carole L. Linster | Nicole Paczia | Zhi Zhang | C. Jaeger | Zhi Zhang | Paul P. Jung
[1] Leonid Kruglyak,et al. Genetic Influences on Translation in Yeast , 2014, bioRxiv.
[2] Yuya Araki,et al. A Loss-of-Function Mutation in the PAS Kinase Rim15p Is Related to Defective Quiescence Entry and High Fermentation Rates of Saccharomyces cerevisiae Sake Yeast Strains , 2012, Applied and Environmental Microbiology.
[3] A. DeLuna,et al. High-Resolution Profiling of Stationary-Phase Survival Reveals Yeast Longevity Factors and Their Genetic Interactions , 2014, PLoS genetics.
[4] J. Gancedo. Yeast Carbon Catabolite Repression , 1998, Microbiology and Molecular Biology Reviews.
[5] Robert P. Davey,et al. Population genomics of domestic and wild yeasts , 2008, Nature.
[6] Tatiana L. Iouk,et al. Mitochondrial membrane lipidome defines yeast longevity , 2013, Aging.
[7] Julien Gagneur,et al. Genotype-Environment Interactions Reveal Causal Pathways That Mediate Genetic Effects on Phenotype , 2013, PLoS genetics.
[8] Michael Davey,et al. The alternate AP-1 adaptor subunit Apm2 interacts with the Mil1 regulatory protein and confers differential cargo sorting , 2016, Molecular biology of the cell.
[9] Leopold Parts,et al. A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes , 2014, Molecular biology and evolution.
[10] Christopher J. Murakami,et al. A molecular mechanism of chronological aging in yeast , 2009, Cell cycle.
[11] Jef D Boeke,et al. Genome-wide consequences of deleting any single gene. , 2013, Molecular cell.
[12] G. Kroemer,et al. Lifespan Extension by Methionine Restriction Requires Autophagy-Dependent Vacuolar Acidification , 2014, PLoS genetics.
[13] Paul M. Magwene,et al. The Statistics of Bulk Segregant Analysis Using Next Generation Sequencing , 2011, PLoS Comput. Biol..
[14] W. G. Hill,et al. Heritability in the genomics era — concepts and misconceptions , 2008, Nature Reviews Genetics.
[15] Paul M. Magwene,et al. The Genetic Architecture of Biofilm Formation in a Clinical Isolate of Saccharomyces cerevisiae , 2013, Genetics.
[16] Lei M. Li,et al. Tor1/Sch9-Regulated Carbon Source Substitution Is as Effective as Calorie Restriction in Life Span Extension , 2009, PLoS genetics.
[17] Júlia Santos,et al. Dietary Restriction and Nutrient Balance in Aging , 2015, Oxidative medicine and cellular longevity.
[18] Christopher J. Murakami,et al. A genomic analysis of chronological longevity factors in budding yeast , 2011, Cell cycle.
[19] Richard Durbin,et al. Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .
[20] Christopher J. Murakami,et al. A method for high-throughput quantitative analysis of yeast chronological life span. , 2008, The journals of gerontology. Series A, Biological sciences and medical sciences.
[21] Narmada Thanki,et al. CDD: NCBI's conserved domain database , 2014, Nucleic Acids Res..
[22] M. Ogur,et al. Genetic and Physiological Control of Serine and Glycine Biosynthesis in Saccharomyces , 1972, Journal of bacteriology.
[23] V. Longo,et al. Regulation of Longevity and Stress Resistance by Sch9 in Yeast , 2001, Science.
[24] V. Longo,et al. Chronological aging in Saccharomyces cerevisiae. , 2012, Sub-cellular biochemistry.
[25] L. Kruglyak,et al. Genetic Basis of Metabolome Variation in Yeast , 2014, PLoS genetics.
[26] Anders Blomberg,et al. Trait Variation in Yeast Is Defined by Population History , 2011, PLoS genetics.
[27] J. Aris,et al. Autophagy and amino acid homeostasis are required for chronological longevity in Saccharomyces cerevisiae , 2009, Aging cell.
[28] Alexander Skupin,et al. Protocols and Programs for High-Throughput Growth and Aging Phenotyping in Yeast , 2015, PloS one.
[29] B. Le Bizec,et al. Simultaneous measurement of plasma concentrations and 13C-enrichment of short-chain fatty acids, lactic acid and ketone bodies by gas chromatography coupled to mass spectrometry. , 2003, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.
[30] Matt Kaeberlein,et al. Lessons on longevity from budding yeast , 2010, Nature.
[31] L. Kruglyak,et al. Natural Polymorphism in BUL2 Links Cellular Amino Acid Availability with Chronological Aging and Telomere Maintenance in Yeast , 2011, PLoS genetics.
[32] L. Kruglyak,et al. Genetic Dissection of Transcriptional Regulation in Budding Yeast , 2002, Science.
[33] F Baganz,et al. Systematic functional analysis of the yeast genome. , 1998, Trends in biotechnology.
[34] Anders Blomberg,et al. Ser3p (Yer081wp) and Ser33p (Yil074cp) Are Phosphoglycerate Dehydrogenases in Saccharomyces cerevisiae * , 2003, The Journal of Biological Chemistry.
[35] H. Hakonarson,et al. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data , 2010, Nucleic acids research.
[36] Daniel A. Skelly,et al. The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen , 2015, Genome research.
[37] L. Parts,et al. gitter: A Robust and Accurate Method for Quantification of Colony Sizes From Plate Images , 2014, G3: Genes, Genomes, Genetics.
[38] Leonid Kruglyak,et al. Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae , 2009, Nature.
[39] Jef D. Boeke,et al. A Microarray-Based Genetic Screen for Yeast Chronological Aging Factors , 2010, PLoS genetics.
[40] Justin C. Fay,et al. Evidence for Domesticated and Wild Populations of Saccharomyces cerevisiae , 2005, PLoS genetics.
[41] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[42] Gianni Liti,et al. Sequence Diversity, Reproductive Isolation and Species Concepts in Saccharomyces , 2006, Genetics.
[43] S. Oliver,et al. Chronological Lifespan in Yeast Is Dependent on the Accumulation of Storage Carbohydrates Mediated by Yak1, Mck1 and Rim15 Kinases , 2016, PLoS genetics.
[44] A. Dudley,et al. Natural Variation in SER1 and ENA6 Underlie Condition-Specific Growth Defects in Saccharomyces cerevisiae , 2017, G3: Genes, Genomes, Genetics.
[45] D. Botstein,et al. Yeast: An Experimental Organism for 21st Century Biology , 2011, Genetics.
[46] Justin C. Fay,et al. A Noncomplementation Screen for Quantitative Trait Alleles in Saccharomyces cerevisiae , 2012, G3: Genes | Genomes | Genetics.
[47] Chao Cheng,et al. Life Span Extension by Calorie Restriction Depends on Rim15 and Transcription Factors Downstream of Ras/PKA, Tor, and Sch9 , 2007, PLoS genetics.
[48] K. Entian,et al. Molecular analysis of the yeast SER1 gene encoding 3-phosphoserine aminotransferase: regulation by general control and serine repression , 1995, Current Genetics.
[49] Justin C. Fay,et al. Genomic Sequence Diversity and Population Structure of Saccharomyces cerevisiae Assessed by RAD-seq , 2013, G3: Genes, Genomes, Genetics.
[50] L. Kruglyak,et al. Finding the sources of missing heritability in a yeast cross , 2012, Nature.
[51] B. Kennedy,et al. Replicative and chronological aging in Saccharomyces cerevisiae. , 2012, Cell metabolism.
[52] C. Kenyon. The genetics of ageing , 2010, Nature.
[53] B. Kennedy,et al. Tor-Sch9 deficiency activates catabolism of the ketone body-like acetic acid to promote trehalose accumulation and longevity , 2014, Aging cell.
[54] Dietmar Schomburg,et al. MetaboliteDetector: comprehensive analysis tool for targeted and nontargeted GC/MS based metabolome analysis. , 2009, Analytical chemistry.
[55] Ruedi Aebersold,et al. Yeast endosulfines control entry into quiescence and chronological life span by inhibiting protein phosphatase 2A. , 2013, Cell reports.
[56] Leonid Kruglyak,et al. Genetic interactions contribute less than additive effects to quantitative trait variation in yeast , 2015, Nature Communications.
[57] Leonid Kruglyak,et al. Dissection of genetically complex traits with extremely large pools of yeast segregants , 2010, Nature.
[58] Daniel R. Richards,et al. Dissecting the architecture of a quantitative trait locus in yeast , 2002, Nature.
[59] Dejian Huang,et al. Independent and Additive Effects of Glutamic Acid and Methionine on Yeast Longevity , 2013, PloS one.