Smooth muscle-specific MMP17 (MT4-MMP) defines the intestinal ECM niche

Smooth muscle is an essential component of the intestine, both to maintain its structure and produce peristaltic and segmentation movements. However, very little is known about other putative roles that smooth muscle may have. Here, we show that smooth muscle is the dominant supplier of BMP antagonists, which are niche factors that are essential for intestinal stem cell maintenance. Furthermore, muscle-derived factors can render epithelium reparative and fetal-like, which includes heightened YAP activity. Mechanistically, we find that the matrix metalloproteinase MMP17, which is exclusively expressed by smooth muscle, is required for intestinal epithelial repair after inflammation- or irradiation-induced injury. Furthermore, we provide evidence that MMP17 affects intestinal epithelial reprogramming indirectly by cleaving the matricellular protein PERIOSTIN, which itself is able to activate YAP. Together, we identify an important signaling axis that firmly establishes a role for smooth muscle as a modulator of intestinal epithelial regeneration and the intestinal stem cell niche.

[1]  R. Maizels,et al.  Developmental pathways regulate cytokine-driven effector and feedback responses in the intestinal epithelium , 2020, bioRxiv.

[2]  Y. Kluger,et al.  Paracrine orchestration of intestinal tumorigenesis by a mesenchymal niche , 2020, Nature.

[3]  H. Clevers,et al.  Ascl2-Dependent Cell Dedifferentiation Drives Regeneration of Ablated Intestinal Stem Cells. , 2020, Cell stem cell.

[4]  Guocheng Yuan,et al.  Distinct Mesenchymal Cell Populations Generate the Essential Intestinal BMP Signaling Gradient. , 2020, Cell stem cell.

[5]  I. Glass,et al.  In vitro and in vivo development of the human intestinal niche at single cell resolution , 2020, bioRxiv.

[6]  Handong Ma,et al.  Periostin Promotes Colorectal Tumorigenesis through Integrin-FAK-Src Pathway-Mediated YAP/TAZ Activation. , 2020, Cell reports.

[7]  J. Gisbert,et al.  Endothelial MT1‐MMP targeting limits intussusceptive angiogenesis and colitis via TSP1/nitric oxide axis , 2019, EMBO molecular medicine.

[8]  L. Sibley,et al.  Long-Term Culture Captures Injury-Repair Cycles of Colonic Stem Cells , 2019, Cell.

[9]  D. Sprinzak,et al.  Genetic and Mechanical Regulation of Intestinal Smooth Muscle Development , 2019, Cell.

[10]  Markus Rempfler,et al.  Self-organization and symmetry breaking in intestinal organoid development , 2019, Nature.

[11]  Mark Gerstein,et al.  GENCODE reference annotation for the human and mouse genomes , 2018, Nucleic Acids Res..

[12]  O. Klein,et al.  Parasitic helminthes induce fetal-like reversion in the intestinal stem cell niche , 2018, Nature.

[13]  K. Basler,et al.  GLI1-expressing mesenchymal cells form the essential Wnt-secreting niche for colon stem cells , 2018, Nature.

[14]  Yier Qiu,et al.  Promotion of Tumor Growth by ADAMTS4 in Colorectal Cancer: Focused on Macrophages , 2018, Cellular Physiology and Biochemistry.

[15]  K. Sigmundsson,et al.  PDGFRα+ pericryptal stromal cells are the critical source of Wnts and RSPO3 for murine intestinal stem cells in vivo , 2018, Proceedings of the National Academy of Sciences.

[16]  Vanessa Núñez,et al.  MT4-MMP deficiency increases patrolling monocyte recruitment to early lesions and accelerates atherosclerosis , 2018, Nature Communications.

[17]  Hailin Zhao,et al.  The role of osteopontin in the progression of solid organ tumour , 2018, Cell Death & Disease.

[18]  S. Itzkovitz,et al.  Subepithelial telocytes are an important source of Wnts that supports intestinal crypts , 2018, Nature.

[19]  O. Nielsen,et al.  YAP/TAZ-Dependent Reprogramming of Colonic Epithelium Links ECM Remodeling to Tissue Regeneration , 2018, Cell Stem Cell.

[20]  I. Kii,et al.  Periostin function in communication with extracellular matrices , 2018, Journal of Cell Communication and Signaling.

[21]  R. Chiavacci,et al.  Fasoracetam in adolescents with ADHD and glutamatergic gene network variants disrupting mGluR neurotransmitter signaling , 2018, Nature Communications.

[22]  V. Li,et al.  Intestinal Stem Cell Niche: The Extracellular Matrix and Cellular Components , 2017, Stem cells international.

[23]  Bing Zhao,et al.  BMP restricts stemness of intestinal Lgr5+ stem cells by directly suppressing their signature genes , 2017, Nature Communications.

[24]  H. Miyoshi,et al.  Prostaglandin E2 promotes intestinal repair through an adaptive cellular response of the epithelium , 2017, The EMBO journal.

[25]  T. Ohshima,et al.  Stimulated emission from nitrogen-vacancy centres in diamond , 2016, Nature Communications.

[26]  Hans Clevers,et al.  Designer matrices for intestinal stem cell and organoid culture , 2016, Nature.

[27]  Andrew D. Rouillard,et al.  Enrichr: a comprehensive gene set enrichment analysis web server 2016 update , 2016, Nucleic Acids Res..

[28]  K. Jakubowska,et al.  Expressions of Matrix Metalloproteinases (MMP-2, MMP-7, and MMP-9) and Their Inhibitors (TIMP-1, TIMP-2) in Inflammatory Bowel Diseases , 2016, Gastroenterology research and practice.

[29]  J. Wrana,et al.  Yap-dependent reprogramming of Lgr5+ stem cells drives intestinal regeneration and cancer , 2015, Nature.

[30]  Mingfei Zhao,et al.  The impact of osteopontin on prognosis and clinicopathology of colorectal cancer patients: a systematic meta-analysis , 2015, Scientific Reports.

[31]  J. Redondo,et al.  Deficiency of MMP17/MT4-MMP proteolytic activity predisposes to aortic aneurysm in mice. , 2015, Circulation research.

[32]  J. Gilmer,et al.  Matrix Metalloproteinases in Inflammatory Bowel Disease: An Update , 2015, Mediators of inflammation.

[33]  Z. Werb,et al.  Matrix metalloproteinases in stem cell regulation and cancer , 2015, Matrix biology : journal of the International Society for Matrix Biology.

[34]  D. Virshup,et al.  The Intestinal Stem Cell Niche , 2015 .

[35]  Jennie B. Leach,et al.  Extracellular Matrix , 2015, Neuromethods.

[36]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[37]  J. Foidart,et al.  EGFR activation and signaling in cancer cells are enhanced by the membrane-bound metalloprotease MT4-MMP. , 2014, Cancer research.

[38]  P. Bonaldo,et al.  Extracellular matrix: A dynamic microenvironment for stem cell niche , 2014, Biochimica et biophysica acta.

[39]  Wei Shi,et al.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features , 2013, Bioinform..

[40]  J. Karp,et al.  Niche-independent high-purity cultures of Lgr5+ intestinal stem cells and their progeny , 2013, Nature Methods.

[41]  M. Steelman Gene Set Enrichment Analysis (GSEA) , 2014 .

[42]  Avi Ma'ayan,et al.  Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool , 2013, BMC Bioinformatics.

[43]  Hans Clevers,et al.  Primary mouse small intestinal epithelial cell cultures. , 2013, Methods in molecular biology.

[44]  Thomas R. Gingeras,et al.  STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..

[45]  J. Massagué TGFβ signalling in context , 2012, Nature Reviews Molecular Cell Biology.

[46]  Guangchuang Yu,et al.  clusterProfiler: an R package for comparing biological themes among gene clusters. , 2012, Omics : a journal of integrative biology.

[47]  M. Neuman Osteopontin Biomarker in Inflammatory Bowel Disease, Animal Models and Target for Drug Discovery , 2012, Digestive Diseases and Sciences.

[48]  T. Wight,et al.  The extracellular matrix: an active or passive player in fibrosis? , 2011, American journal of physiology. Gastrointestinal and liver physiology.

[49]  Hans Clevers,et al.  Long-term expansion of epithelial organoids from human colon, adenoma, adenocarcinoma, and Barrett's epithelium. , 2011, Gastroenterology.

[50]  O. Klein,et al.  A reserve stem cell population in small intestine renders Lgr5-positive cells dispensable , 2011, Nature.

[51]  A. Kudo Periostin in fibrillogenesis for tissue regeneration: periostin actions inside and outside the cell , 2011, Cellular and Molecular Life Sciences.

[52]  R. Tingley,et al.  Smart Moves: Effects of Relative Brain Size on Establishment Success of Invasive Amphibians and Reptiles , 2011, PloS one.

[53]  Gaël Varoquaux,et al.  Scikit-learn: Machine Learning in Python , 2011, J. Mach. Learn. Res..

[54]  A. Parker,et al.  Matrix metalloproteinase 17 is necessary for cartilage aggrecan degradation in an inflammatory environment , 2011, Annals of the rheumatic diseases.

[55]  I. Kii,et al.  Interaction between Periostin and BMP-1 Promotes Proteolytic Activation of Lysyl Oxidase* , 2010, The Journal of Biological Chemistry.

[56]  C. Overall,et al.  Matrix metalloproteinases: what do they not do? New substrates and biological roles identified by murine models and proteomics. , 2010, Biochimica et biophysica acta.

[57]  R. Kizek,et al.  Matrix metalloproteinases. , 2010, Current medicinal chemistry.

[58]  H. Clevers,et al.  Single Lgr5 stem cells build crypt–villus structures in vitro without a mesenchymal niche , 2009, Nature.

[59]  N. Vickaryous,et al.  Apc mice: models, modifiers and mutants. , 2008, Pathology, research and practice.

[60]  R. DePinho,et al.  LKB1 signaling in mesenchymal cells required for suppression of gastrointestinal polyposis , 2008, Nature Genetics.

[61]  M. Fukayama,et al.  Periostin is essential for cardiac healingafter acute myocardial infarction , 2008, The Journal of experimental medicine.

[62]  M. Fukayama,et al.  Periostin is essential for cardiac healing after acute myocardial infarction , 2008 .

[63]  H. Clevers,et al.  Identification of stem cells in small intestine and colon by marker gene Lgr5 , 2007, Nature.

[64]  N. Yoshida,et al.  Establishment of an MT4‐MMP‐deficient mouse strain representing an efficient tracking system for MT4‐MMP/MMP‐17 expression in vivo using β‐galactosidase , 2007, Genes to cells : devoted to molecular & cellular mechanisms.

[65]  Andrew J. Ewald,et al.  Matrix metalloproteinases and the regulation of tissue remodelling , 2007, Nature Reviews Molecular Cell Biology.

[66]  H. Kolkenbrock,et al.  Biochemical Characterization of the Catalytic Domain of Membrane-Type 4 Matrix Metalloproteinase , 1999, Biological chemistry.

[67]  E. Ruitenberg,et al.  The ‘Swiss roll’: a simple technique for histological studies of the rodent intestine , 1981, Laboratory animals.